Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 0.0e+00 1099.7 551 100.0
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 5.9e-231 804.3 490 82.0
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 1.8e-227 792.7 484 82.4
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 3.3e-218 761.9 485 79.4
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 6.5e-206 721.1 488 75.2
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 2.7e-204 715.7 488 74.6
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 4.5e-199 698.4 487 73.5
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 2.3e-198 696.0 504 71.2
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 2.5e-197 692.6 496 72.6
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 8.9e-195 684.1 493 71.6
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 4.4e-178 628.6 502 64.5
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 9.2e-176 620.9 480 64.2
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 2.1e-175 619.8 505 62.6
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 4.3e-173 612.1 479 64.1
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 1.1e-171 607.4 504 61.9
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 1.2e-170 604.0 506 62.3
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 2.0e-170 603.2 494 63.0
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 4.4e-170 602.1 488 60.9
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 1.9e-168 596.7 483 64.4
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 1.0e-166 590.9 476 62.8
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 1.3e-166 590.5 465 63.7
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 1.7e-166 590.1 487 64.3
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.3e-165 585.5 492 60.0
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 4.3e-165 585.5 493 60.4
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 7.3e-165 584.7 500 61.8
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.5e-162 577.0 493 59.4
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 1.5e-162 577.0 485 60.8
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 2.6e-162 576.2 460 63.0
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 3.8e-161 572.4 493 58.8
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 1.4e-160 570.5 465 61.3
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 1.9e-160 570.1 465 61.3
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 1.6e-159 567.0 469 61.0
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 1.6e-159 567.0 470 61.3
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 6.0e-159 565.1 385 70.4
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 2.3e-158 563.1 468 61.8
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 3.9e-158 562.4 465 60.6
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 3.9e-158 562.4 465 60.2
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.1e-157 560.8 481 59.3
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 1.5e-157 560.5 473 60.7
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 1.1e-155 554.3 490 57.8
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 3.4e-154 549.3 454 61.7
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 6.4e-153 545.0 463 60.0
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 6.4e-153 545.0 464 59.3
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 8.4e-153 544.7 493 57.2
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 8.4e-153 544.7 493 58.6
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 1.1e-152 544.3 471 59.9
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.4e-152 543.9 488 57.4
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 2.4e-152 543.1 481 58.4
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 5.4e-152 542.0 462 60.4
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 7.1e-152 541.6 468 59.2
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 7.1e-152 541.6 465 59.1
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 1.6e-151 540.4 462 59.1
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 2.1e-151 540.0 483 58.6
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 3.5e-151 539.3 471 58.8
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 7.9e-151 538.1 475 58.5
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 1.3e-150 537.3 453 61.1
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 2.3e-150 536.6 448 60.0
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.5e-149 533.1 416 62.3
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.3e-149 532.3 416 62.0
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 5.6e-149 531.9 478 59.0
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 7.4e-149 531.6 485 57.5
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 2.1e-148 530.0 479 57.8
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 3.7e-148 529.3 458 59.6
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 6.2e-148 528.5 446 61.2
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 8.1e-148 528.1 466 60.7
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 4.5e-146 522.3 483 56.3
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 9.9e-146 521.2 459 58.0
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 2.2e-145 520.0 478 57.7
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 1.1e-144 517.7 474 56.8
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 6.0e-143 511.9 440 60.9
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 3.0e-142 509.6 466 55.2
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 3.9e-142 509.2 452 57.1
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 2.5e-141 506.5 465 56.1
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 4.3e-141 505.8 481 56.5
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 9.6e-141 504.6 480 54.4
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 9.6e-141 504.6 478 56.7
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 1.3e-140 504.2 436 59.2
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 1.6e-140 503.8 444 55.6
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 4.8e-140 502.3 488 53.5
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 8.2e-140 501.5 460 57.2
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 1.1e-139 501.1 489 56.0
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 1.1e-139 501.1 480 56.2
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 1.1e-139 501.1 446 58.5
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 1.4e-139 500.7 435 59.1
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 2.4e-139 500.0 484 57.0
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 2.4e-139 500.0 435 59.1
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 9.0e-139 498.0 446 58.3
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 1.7e-137 493.8 435 59.1
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 7.1e-136 488.4 347 68.0
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 6.0e-135 485.3 435 58.4
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 4.3e-133 479.2 411 59.4
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 2.0e-130 470.3 460 57.0
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.8e-123 447.2 330 65.5
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 6.9e-115 418.7 458 48.9
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 5.9e-114 415.6 466 50.0
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 1.4e-112 411.0 493 46.7
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 1.4e-112 411.0 420 54.5
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 3.2e-112 409.8 466 50.0
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 7.4e-109 398.7 403 51.4
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 1.4e-107 394.4 340 59.1
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 6.7e-102 375.6 395 49.9
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 2.6e-101 373.6 406 48.3
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 1.4e-94 351.3 328 58.8
Gohir.D11G349500 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.2e-79 301.6 207 66.7
SEGI_07142 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 6.4e-68 262.7 406 39.7
Actinidia12910 Actinidia chinensis HOM05D006770 ORTHO05D008356 2.4e-67 260.8 338 47.6
Gohir.A06G000350 Gossypium hirsutum HOM05D006770 ORTHO05D008356 3.2e-67 260.4 192 63.5
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 2.4e-59 234.2 184 66.3
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 2.1e-42 177.9 233 44.6
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 3.4e-37 160.6 309 32.7
VMungo0720G0800 Vigna mungo HOM05D006770 ORTHO05D008356 2.9e-36 157.5 135 63.7
Gohir.D02G000400 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.4e-30 137.9 187 47.6
VMungo0331G1801 Vigna mungo HOM05D002295 ORTHO05D008356 4.2e-27 127.1 90 71.1
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 1.3e-25 122.1 106 53.8
Mapoly0166s0014 Marchantia polymorpha HOM05D006770 ORTHO05D008356 1.9e-19 101.7 283 29.7
Pp3c13_18720 Physcomitrium patens HOM05D006770 ORTHO05D008356 2.3e-17 94.7 210 28.6
Pp3c13_18722 Physcomitrium patens HOM05D006770 ORTHO05D008356 2.3e-17 94.7 210 28.6
CBR_g51330 Chara braunii HOM05D009772 ORTHO05D000353 1.3e-15 89.0 307 23.1
vmacro02831 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.6e-15 88.6 132 44.7
Peaxi162Scf00201g00422 Petunia axillaris HOM05D005362 ORTHO05D006895 2.0e-08 65.1 218 24.3
Rhsim12G0149500 Rhododendron simsii HOM05D005362 ORTHO05D006895 3.3e-08 64.3 224 22.3
Rhsim12G0149700 Rhododendron simsii HOM05D005362 ORTHO05D006895 3.3e-08 64.3 224 22.3
Migut.B00504 Erythranthe guttata HOM05D005362 ORTHO05D006895 4.3e-08 63.9 225 24.0
Thhalv10028431m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 4.3e-08 63.9 142 23.2
Medtr1g008310 Medicago truncatula HOM05D003689 ORTHO05D003950 7.4e-08 63.2 149 23.5
PSO017G2138 Papaver somniferum HOM05D005362 ORTHO05D006895 9.7e-08 62.8 220 23.2
vmacro11106 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 9.7e-08 62.8 143 27.3
BcaB01g01838 Brassica carinata HOM05D003177 ORTHO05D003481 1.7e-07 62.0 135 23.0
Sp6g04150 Schrenkiella parvula HOM05D003177 ORTHO05D003481 2.8e-07 61.2 135 22.2
PGSC0003DMG400024629 Solanum tuberosum HOM05D005362 ORTHO05D006895 3.7e-07 60.8 211 24.6
Dinv17441 Davidia involucrata HOM05D005362 ORTHO05D006895 4.8e-07 60.5 132 28.0
Nitab4.5_0003410g0050 Nicotiana tabacum HOM05D000891 ORTHO05D000761 4.8e-07 60.5 160 25.0
A09p26090 Brassica napus HOM05D003177 ORTHO05D003481 6.3e-07 60.1 135 22.2
BraA09t38176Z Brassica rapa HOM05D003177 ORTHO05D003481 6.3e-07 60.1 135 22.2
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 6.3e-07 60.1 124 25.0
Solyc03g114920.1 Solanum lycopersicum HOM05D005362 ORTHO05D006895 6.3e-07 60.1 211 24.2
TAR381G0468 Trochodendron aralioides HOM05D006770 ORTHO05D008356 8.2e-07 59.7 84 42.9
CAN.G1228.5 Capsicum annuum HOM05D005362 ORTHO05D006895 1.4e-06 58.9 218 23.4
Cpa.g.sc15.132 Carica papaya HOM05D006999 ORTHO05D008936 1.4e-06 58.9 231 22.9
Cc11_g04710 Coffea canephora HOM05D005362 ORTHO05D006895 1.8e-06 58.5 224 21.9
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 1.8e-06 58.5 124 23.4
Oeu052452.1 Olea europaea HOM05D005362 ORTHO05D006895 3.1e-06 57.8 164 25.6
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 4.1e-06 57.4 121 23.1
HPP92_006127 Vanilla planifolia HOM05D002479 ORTHO05D002675 4.1e-06 57.4 131 22.9
MSTRG.11331 Avicennia marina HOM05D005362 ORTHO05D006895 5.3e-06 57.0 164 25.0
Lj5P134T43 Lonicera japonica HOM05D005362 ORTHO05D006895 5.3e-06 57.0 210 21.9
vmacro16484 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 5.3e-06 57.0 143 25.2
Aqoxy7G02393 Aquilegia oxysepala HOM05D006258 ORTHO05D007961 6.9e-06 56.6 226 23.5
Ca_14795_v3 Cicer arietinum L. HOM05D000300 ORTHO05D000383 6.9e-06 56.6 200 26.0
Medtr8g031520 Medicago truncatula HOM05D000300 ORTHO05D000383 9.1e-06 56.2 187 26.2


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