Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25454_v3 Cicer arietinum L. HOM05D004837 ORTHO05D005741 0.0e+00 1209.5 685 100.0
Medtr8g103950 Medicago truncatula HOM05D004837 ORTHO05D005741 0.0e+00 1157.1 685 92.7
TPR.G21711 Trifolium pratense HOM05D004837 ORTHO05D005741 0.0e+00 1087.4 660 90.8
Lj4g0025474 Lotus japonicus HOM05D004837 ORTHO05D005741 2.3e-309 1065.1 683 86.4
Lj2g0006103 Lotus japonicus HOM05D004837 ORTHO05D005741 6.7e-301 1036.9 686 82.7
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea HOM05D004837 ORTHO05D005741 1.8e-298 1028.9 685 83.1
Glyma.07G089600 Glycine max HOM05D004837 ORTHO05D005741 1.8e-298 1028.9 691 82.3
Lalb_Chr24g0397611 Lupinus albus HOM05D004837 ORTHO05D005741 5.3e-298 1027.3 687 86.2
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea HOM05D004837 ORTHO05D005741 1.2e-297 1026.2 727 78.7
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea HOM05D004837 ORTHO05D005741 1.4e-295 1019.2 727 78.1
Glyma.09G187100 Glycine max HOM05D004837 ORTHO05D005741 1.9e-295 1018.8 693 81.2
Lalb_Chr22g0352981 Lupinus albus HOM05D004837 ORTHO05D005741 7.9e-294 1013.4 683 82.6
CSS0011479 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 4.4e-292 1007.7 689 80.3
CiPaw.15G128500 Carya illinoinensis HOM05D004837 ORTHO05D005741 1.3e-291 1006.1 685 82.6
TWI15G0076 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 1.3e-291 1006.1 688 82.3
CSS0007108 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 4.8e-291 1004.2 689 80.1
MD10G1081900 Malus domestica HOM05D004837 ORTHO05D005741 6.3e-291 1003.8 685 83.2
Cfa019797 Carpinus fangiana HOM05D004837 ORTHO05D005741 5.9e-289 997.3 688 81.7
Gorai.006G062600 Gossypium raimondii HOM05D004837 ORTHO05D005741 7.2e-287 990.3 686 79.2
Potri.012G061000 Populus trichocarpa HOM05D004837 ORTHO05D005741 2.7e-286 988.4 687 79.3
Actinidia35081 Actinidia chinensis HOM05D004837 ORTHO05D005741 3.6e-286 988.0 689 78.5
ClCG03G012520 Citrullus lanatus HOM05D004837 ORTHO05D005741 3.6e-286 988.0 691 78.9
Gohir.A09G047000 Gossypium hirsutum HOM05D004837 ORTHO05D005741 3.0e-285 984.9 686 78.7
Phvul.004G160100 Phaseolus vulgaris HOM05D004837 ORTHO05D005741 3.0e-285 984.9 694 79.5
Gohir.D09G047500 Gossypium hirsutum HOM05D004837 ORTHO05D005741 3.9e-285 984.6 686 78.9
Prupe.8G104400 Prunus persica HOM05D004837 ORTHO05D005741 1.5e-284 982.6 688 79.2
FvH4_5g12492 Fragaria vesca HOM05D004837 ORTHO05D005741 6.3e-283 977.2 684 81.4
FAN18G2885 Fragaria x ananassa HOM05D004837 ORTHO05D005741 1.2e-281 973.0 684 81.1
RcHm_v2.0_Chr7g0184861 Rosa chinensis HOM05D004837 ORTHO05D005741 1.2e-281 973.0 684 81.0
Thecc.03G030500 Theobroma cacao HOM05D004837 ORTHO05D005741 2.0e-281 972.2 688 78.2
Lj5C146T15 Lonicera japonica HOM05D004837 ORTHO05D005741 7.7e-281 970.3 659 80.7
CsaV3_1G043510 Cucumis sativus L. HOM05D004837 ORTHO05D005741 1.3e-280 969.5 691 77.9
AT3G18480 Arabidopsis thaliana HOM05D004837 ORTHO05D005741 1.7e-280 969.1 694 76.8
TWI81G0923 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 1.1e-279 966.5 688 77.8
COL.COLO4_16258 Corchorus olitorius HOM05D004837 ORTHO05D005741 2.5e-279 965.3 688 78.2
AL3G31770 Arabidopsis lyrata HOM05D004837 ORTHO05D005741 4.2e-279 964.5 693 76.6
Atru.chr9.792 Acer truncatum HOM05D004837 ORTHO05D005741 5.5e-279 964.1 690 77.2
CANSAT80G2884 Cannabis sativa HOM05D004837 ORTHO05D005741 5.5e-279 964.1 687 77.0
Thhalv10020192m.g Eutrema salsugineum HOM05D004837 ORTHO05D005741 7.2e-279 963.8 695 76.7
Manes.05G138800 Manihot esculenta HOM05D004837 ORTHO05D005741 9.4e-279 963.4 686 80.0
CSS0025722 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 2.3e-277 958.7 689 77.4
vmacro23526 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 4.0e-277 958.0 748 72.1
vmacro16451 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 5.2e-277 957.6 748 72.1
Solyc06g069210.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 1.5e-276 956.1 690 76.1
Manes.01G012900 Manihot esculenta HOM05D004837 ORTHO05D005741 2.0e-276 955.7 686 77.4
TAR629G1790 Trochodendron aralioides HOM05D004837 ORTHO05D005741 2.0e-276 955.7 690 76.8
Sed0018155 Sechium edule HOM05D004837 ORTHO05D005741 5.7e-276 954.1 691 76.8
BolC5t33444H Brassica oleracea HOM05D004837 ORTHO05D005741 9.7e-276 953.4 694 75.6
Aa31LG8G5290 Aethionema arabicum HOM05D004837 ORTHO05D005741 1.3e-275 953.0 695 75.7
Ciclev10019149m.g Citrus clementina HOM05D004837 ORTHO05D005741 3.7e-275 951.4 689 76.6
FAN08G2631 Fragaria x ananassa HOM05D004837 ORTHO05D005741 5.3e-274 947.6 684 77.3
FAN04G0597 Fragaria x ananassa HOM05D004837 ORTHO05D005741 1.2e-273 946.4 684 79.5
HanXRQChr17g0558331 Helianthus annuus HOM05D004837 ORTHO05D005741 1.6e-273 946.0 686 76.1
PSO063G6385 Papaver somniferum HOM05D004837 ORTHO05D005741 4.5e-273 944.5 667 77.7
Carub.0003s1824 Capsella rubella HOM05D004837 ORTHO05D005741 2.2e-272 942.2 695 75.4
DCAR_004539 Daucus carota HOM05D004837 ORTHO05D005741 2.2e-272 942.2 688 78.1
THA.LOC104821845 Tarenaya hassleriana HOM05D004837 ORTHO05D005741 2.2e-272 942.2 689 75.8
FAN18G2415 Fragaria x ananassa HOM05D004837 ORTHO05D005741 2.9e-272 941.8 733 73.3
CARHR093830 Cardamine hirsuta HOM05D004837 ORTHO05D005741 3.8e-272 941.4 697 75.0
Eucgr.B00707 Eucalyptus grandis HOM05D004837 ORTHO05D005741 3.8e-272 941.4 697 75.5
ECA233G3214 Erigeron canadensis HOM05D004837 ORTHO05D005741 6.5e-272 940.6 672 76.5
Sopen06g026470 Solanum pennellii HOM05D004837 ORTHO05D005741 6.5e-272 940.6 690 75.5
PSO782G0716 Papaver somniferum HOM05D004837 ORTHO05D005741 1.5e-271 939.5 667 77.5
Aqoxy3G03933 Aquilegia oxysepala HOM05D004837 ORTHO05D005741 7.2e-271 937.2 668 76.9
Lsat_1_v5_gn_8_147101 Lactuca sativa HOM05D004837 ORTHO05D005741 7.2e-271 937.2 690 74.5
BolC1t04537H Brassica oleracea HOM05D004837 ORTHO05D005741 1.6e-270 936.0 696 74.6
BcaC05g28614 Brassica carinata HOM05D004837 ORTHO05D005741 1.4e-269 932.9 694 74.5
C05p47190 Brassica napus HOM05D004837 ORTHO05D005741 4.0e-269 931.4 694 74.4
Rhsim12G0143900 Rhododendron simsii HOM05D004837 ORTHO05D005741 5.2e-269 931.0 655 77.4
GSVIVG01008258001 Vitis vinifera HOM05D004837 ORTHO05D005741 5.2e-269 931.0 669 75.9
Sabra12G0044300 Salix brachista HOM05D004837 ORTHO05D005741 6.8e-269 930.6 696 78.2
Duzib084G1378 Durio zibethinus HOM05D004837 ORTHO05D005741 3.4e-268 928.3 688 75.4
QL10p023827 Quercus lobata HOM05D004837 ORTHO05D005741 2.4e-266 922.2 687 76.4
BcaB04g20769 Brassica carinata HOM05D004837 ORTHO05D005741 3.5e-265 918.3 692 74.3
Sp3g16570 Schrenkiella parvula HOM05D004837 ORTHO05D005741 3.5e-265 918.3 694 73.8
BcaC09g48805 Brassica carinata HOM05D004837 ORTHO05D005741 4.5e-265 917.9 696 73.9
C01p45740 Brassica napus HOM05D004837 ORTHO05D005741 4.5e-265 917.9 696 73.9
BcaB06g25891 Brassica carinata HOM05D004837 ORTHO05D005741 1.1e-263 913.3 692 74.0
Nn4g23774 Nelumbo nucifera HOM05D004837 ORTHO05D005741 1.5e-263 912.9 690 73.9
VMungo0464G1696 Vigna mungo HOM05D004837 ORTHO05D005741 1.8e-261 906.0 694 74.5
SGA_v2.0_scaffold10G05151 Striga asiatica HOM05D004837 ORTHO05D005741 3.0e-261 905.2 692 73.6
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea HOM05D004837 ORTHO05D005741 4.0e-261 904.8 685 75.9
A01p35930 Brassica napus HOM05D004837 ORTHO05D005741 8.9e-261 903.7 695 73.1
Cpa.g.sc13.20 Carica papaya HOM05D004837 ORTHO05D005741 9.8e-260 900.2 692 74.3
A05p31170 Brassica napus HOM05D004837 ORTHO05D005741 3.7e-259 898.3 693 73.0
BraA05t21958Z Brassica rapa HOM05D004837 ORTHO05D005741 3.7e-259 898.3 693 73.0
MSTRG.14939 Avicennia marina HOM05D004837 ORTHO05D005741 1.8e-258 896.0 686 72.9
BraA01t03672Z Brassica rapa HOM05D004837 ORTHO05D005741 2.3e-256 889.0 726 70.1
Migut.M00003 Erythranthe guttata HOM05D004837 ORTHO05D005741 5.2e-253 877.9 686 71.7
unitig_37.g12022 Utricularia gibba HOM05D004837 ORTHO05D005741 1.2e-252 876.7 680 71.0
Nitab4.5_0010565g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.7e-251 872.8 737 68.4
MBI13_g10043_MAGBIO Magnolia biondii HOM05D004837 ORTHO05D005741 3.7e-251 871.7 682 72.0
PGR083G0937 Punica granatum HOM05D004837 ORTHO05D005741 3.7e-251 871.7 688 71.9
Haze_18623 Corylus avellana HOM05D004837 ORTHO05D005741 5.4e-250 867.8 1038 54.6
Peaxi162Scf00013g00943 Petunia axillaris HOM05D004837 ORTHO05D005741 7.8e-249 864.0 659 73.1
Psat7g012560 Pisum sativum HOM05D004837 ORTHO05D005741 7.3e-247 857.4 548 88.7
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 7.3e-247 857.4 641 76.4
Cc04_g07300 Coffea canephora HOM05D004837 ORTHO05D005741 9.5e-247 857.1 689 70.1
Nitab4.5_0001432g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 3.4e-244 848.6 723 69.6
EL10Ac5g11426 Beta vulgaris HOM05D004837 ORTHO05D005741 3.2e-242 842.0 674 72.8
Ah.02g115350 Amaranthus hybridus HOM05D004837 ORTHO05D005741 3.5e-241 838.6 689 69.5
AUR62029852 Chenopodium quinoa HOM05D004837 ORTHO05D005741 2.5e-239 832.4 676 70.3
AUR62025880 Chenopodium quinoa HOM05D004837 ORTHO05D005741 1.4e-237 826.6 679 69.7
Dinv40420 Davidia involucrata HOM05D004837 ORTHO05D005741 7.5e-236 820.8 577 79.2
Os03g0710900 Oryza sativa ssp. japonica HOM05D004837 ORTHO05D005741 7.5e-236 820.8 674 69.0
CDE11G0344 Ceratophyllum demersum HOM05D004837 ORTHO05D005741 2.9e-235 818.9 655 70.2
Nitab4.5_0001599g0070 Nicotiana tabacum HOM05D004837 ORTHO05D005741 7.1e-234 814.3 721 65.3
Nitab4.5_0008699g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 6.0e-233 811.2 742 65.5
Hund02403 Selenicereus undatus HOM05D004837 ORTHO05D005741 7.8e-233 810.8 626 73.5
Zm00001eb216420 Zea mays HOM05D004837 ORTHO05D005741 7.8e-233 810.8 657 71.4
HPP92_013262 Vanilla planifolia HOM05D004837 ORTHO05D005741 8.1e-230 800.8 676 66.3
ATR0021G039 Amborella trichopoda HOM05D004837 ORTHO05D005741 6.4e-227 791.2 688 65.4
SEGI_01686 Sequoiadendron giganteum HOM05D004837 ORTHO05D005741 1.1e-221 773.9 652 67.2
Mapoly0091s0053 Marchantia polymorpha HOM05D004837 ORTHO05D005741 3.7e-206 722.2 653 63.4
Oeu016160.3 Olea europaea HOM05D004837 ORTHO05D005741 8.4e-203 711.1 726 60.1
Pp3c3_5600 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.1e-202 710.7 652 61.3
SMO147G0276 Selaginella moellendorffii HOM05D004837 ORTHO05D005741 3.0e-200 702.6 655 60.5
Pp3c25_10040 Physcomitrium patens HOM05D004837 ORTHO05D005741 7.1e-194 681.4 651 59.8
PGSC0003DMG400004053 Solanum tuberosum HOM05D004837 ORTHO05D005741 3.7e-166 589.3 424 77.4
MELO3C015107.2 Cucumis melo HOM05D004837 ORTHO05D005741 2.3e-160 570.1 401 78.8
CBR_g38539 Chara braunii HOM05D004837 ORTHO05D005741 2.9e-155 553.1 696 47.7
Actinidia31023 Actinidia chinensis HOM05D004837 ORTHO05D005741 2.1e-137 493.8 372 72.8
HPP92_013216 Vanilla planifolia HOM05D004837 ORTHO05D005741 3.6e-121 439.9 346 66.5
AagrBONN_evm.TU.Sc2ySwM_228.1000 Anthoceros agrestis HOM05D004837 ORTHO05D005741 1.1e-114 418.3 569 46.9
CAN.G423.1 Capsicum annuum HOM05D004837 ORTHO05D005741 3.2e-93 347.1 422 54.0
Atru.chr9.1054 Acer truncatum HOM05D004837 ORTHO05D005741 1.8e-83 314.7 474 46.8
Atru.chr9.1055 Acer truncatum HOM05D004837 ORTHO05D005741 1.4e-80 305.1 517 44.3
HPP92_013215 Vanilla planifolia HOM05D004837 ORTHO05D005741 1.4e-77 295.0 272 64.7
Cre08.g382650 Chlamydomonas reinhardtii HOM05D004837 ORTHO05D005741 5.3e-72 276.6 713 30.9
MELO3C029547.2 Cucumis melo HOM05D004837 ORTHO05D005741 5.2e-51 206.8 185 65.9
Prupe.8G103800 Prunus persica HOM05D004837 ORTHO05D005741 1.3e-49 202.2 778 30.7
CAN.G587.83 Capsicum annuum HOM05D004837 ORTHO05D005741 1.4e-48 198.7 129 79.1
Gohir.D12G266250 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.0e-46 192.6 151 70.9
SHI30382 Sapria himalayana HOM05D004837 ORTHO05D005741 2.7e-44 184.5 124 77.4
Nitab4.5_0010701g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.7e-38 165.2 94 87.2
Gorai.008G286000 Gossypium raimondii HOM05D004837 ORTHO05D005741 2.9e-38 164.5 262 47.7
PRCOL_00005675 Prasinoderma coloniale HOM05D004837 ORTHO05D005741 3.0e-27 127.9 604 25.0
Ah.11g042150 Amaranthus hybridus HOM05D004837 ORTHO05D005741 9.2e-24 116.3 92 71.7
Cfa021462 Carpinus fangiana HOM05D004837 ORTHO05D005741 1.0e-19 102.8 680 22.8
Solyc03g119670.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 2.3e-19 101.7 71 76.1
BcaC07g39700 Brassica carinata HOM05D004837 ORTHO05D026816 8.3e-17 93.2 109 57.8
BolC8t50465H Brassica oleracea HOM05D004837 ORTHO05D005741 1.3e-14 85.9 82 64.6
Psat7g009760 Pisum sativum HOM05D004837 ORTHO05D005741 3.9e-14 84.3 49 87.8
C08p28590 Brassica napus HOM05D004837 ORTHO05D005741 6.8e-11 73.6 82 59.8
MCO10G228 Micromonas commoda HOM05D004837 ORTHO05D005741 6.8e-11 73.6 690 21.9
Actinidia31022 Actinidia chinensis HOM05D004837 ORTHO05D005741 4.4e-10 70.9 203 36.0
DCAR_013034 Daucus carota HOM05D004837 ORTHO05D005741 7.8e-07 60.1 51 62.7


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