Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25385_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013491 7.9e-225 783.5 403 100.0
Ca_04597_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013768 3.9e-91 339.3 322 60.9
Psat7g138400 Pisum sativum HOM05D000743 ORTHO05D000580 2.2e-57 227.3 173 72.3
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 1.6e-39 167.9 212 46.7
TPR.G503 Trifolium pratense HOM05D008923 ORTHO05D013491 1.1e-37 161.8 84 95.2
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 8.9e-35 152.1 144 56.9
Medtr2g040790 Medicago truncatula HOM05D008923 ORTHO05D013491 4.4e-34 149.8 146 63.0
Gorai.001G163100 Gossypium raimondii HOM05D008923 ORTHO05D013491 7.3e-29 132.5 70 91.4
Gohir.A05G254000 Gossypium hirsutum HOM05D008923 ORTHO05D013491 1.8e-27 127.9 87 75.9
ECA234G1463 Erigeron canadensis HOM05D000013 ORTHO05D000011 5.2e-27 126.3 88 76.1
Gohir.D01G116800 Gossypium hirsutum HOM05D008923 ORTHO05D013491 1.9e-24 117.9 70 80.0
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 8.3e-17 92.4 120 41.7
arahy.Tifrunner.gnm1.ann1.3IB35P Arachis hypogaea HOM05D012633 ORTHO05D013491 1.5e-13 81.6 171 36.8
arahy.Tifrunner.gnm1.ann1.FQX7TC Arachis hypogaea HOM05D012633 ORTHO05D013491 1.9e-13 81.3 171 36.8
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 1.6e-12 78.2 120 39.2
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 6.2e-12 76.3 121 37.2
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 1.1e-11 75.5 120 38.3
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 1.4e-11 75.1 121 36.4
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 5.2e-11 73.2 141 31.9
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 6.8e-11 72.8 174 30.5
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 6.8e-11 72.8 114 35.1
Manes.09G035001 Manihot esculenta HOM05D015862 ORTHO05D010659 4.4e-10 70.1 129 43.4
SHI47523 Sapria himalayana HOM05D012633 ORTHO05D013491 5.8e-10 69.7 49 69.4
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.9e-09 67.4 108 37.0
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.9e-09 67.4 108 37.0
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.9e-09 67.4 108 37.0
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.9e-09 67.4 108 37.0
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 2.9e-09 67.4 108 37.0
Sopen07g009930 Solanum pennellii HOM05D000004 ORTHO05D000034 4.9e-09 66.6 41 80.5
Sopen05g009620 Solanum pennellii HOM05D008814 ORTHO05D010812 8.4e-09 65.9 45 68.9
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 1.1e-08 65.5 128 30.5
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 1.1e-08 65.5 117 34.2
HanXRQChr13g0388591 Helianthus annuus HOM05D009000 ORTHO05D010659 1.4e-08 65.1 114 35.1
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 2.4e-08 64.3 172 30.2
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.2e-08 63.9 129 31.8
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 3.2e-08 63.9 129 31.8
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 1.6e-07 61.6 114 31.6
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 2.7e-07 60.8 122 35.2
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 4.6e-07 60.1 122 35.2
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 7.8e-07 59.3 111 36.9
Lsat_1_v5_gn_5_17721 Lactuca sativa HOM05D009000 ORTHO05D010659 2.3e-06 57.8 116 31.0
TPR.G35117 Trifolium pratense HOM05D009000 ORTHO05D010659 5.1e-06 56.6 79 41.8
Lj3A148G6 Lonicera japonica HOM05D008999 ORTHO05D010908 8.7e-06 55.8 47 61.7


User provided reference genes

Program Settings