Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 0.0e+00 1492.2 807 100.0
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 6.7e-284 980.7 823 70.2
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 4.3e-246 855.1 776 65.7
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 4.3e-222 775.4 856 57.4
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 1.1e-212 744.2 657 66.8
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 3.1e-204 716.1 807 57.0
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 2.1e-184 650.2 741 56.4
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 2.9e-170 603.2 810 51.0
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 2.9e-154 550.1 777 51.0
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 3.8e-146 523.1 723 49.7
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 2.6e-142 510.4 704 49.1
Psat7g226800 Pisum sativum HOM05D012459 ORTHO05D010844 8.4e-101 372.5 629 45.8
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 3.9e-90 337.0 818 39.4
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 1.1e-68 265.8 612 40.7
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 1.0e-66 259.2 418 45.5
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 2.6e-25 121.7 858 26.2
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 9.8e-25 119.8 826 25.5
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 5.4e-23 114.0 859 26.5
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 2.0e-22 112.1 991 25.8
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 3.5e-22 111.3 825 26.3
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 2.8e-19 101.7 985 25.6
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 2.8e-19 101.7 806 26.2
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 2.8e-19 101.7 1002 24.2
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 3.0e-18 98.2 835 27.7
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 2.0e-17 95.5 834 24.2
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 2.6e-17 95.1 750 26.3
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 3.4e-17 94.7 826 24.5
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 4.4e-17 94.4 813 27.2
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 4.9e-16 90.9 379 31.4
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 1.1e-15 89.7 835 28.3
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.4e-15 88.6 833 27.6
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 7.0e-15 87.0 806 26.8
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 1.6e-14 85.9 843 25.3
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 3.9e-13 81.3 837 25.4
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 4.3e-12 77.8 390 27.9
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 7.3e-12 77.0 235 37.9
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 1.8e-10 72.4 514 27.2
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 3.1e-10 71.6 235 37.9
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 5.2e-10 70.9 394 25.6
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 8.9e-10 70.1 173 32.9
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 1.5e-09 69.3 205 35.6
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 2.6e-09 68.6 829 25.5
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 7.5e-09 67.0 168 36.3
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 1.7e-08 65.9 181 35.9
CARHR277640 Cardamine hirsuta HOM05D009813 ORTHO05D011936 2.9e-08 65.1 157 40.8
Sed0024256 Sechium edule HOM05D036858 ORTHO05D010844 1.4e-07 62.8 423 27.2
THA.LOC104800245 Tarenaya hassleriana HOM05D009813 ORTHO05D011936 1.4e-07 62.8 824 22.5
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 1.4e-07 62.8 850 24.0
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 4.1e-07 61.2 847 25.4
CARHR098770 Cardamine hirsuta HOM05D009813 ORTHO05D011936 9.2e-07 60.1 231 36.4
AUR62003591 Chenopodium quinoa HOM05D030946 ORTHO05D010844 1.2e-06 59.7 107 41.1
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 1.6e-06 59.3 188 36.2
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 1.6e-06 59.3 188 36.2
CANSAT35G0648 Cannabis sativa HOM05D012459 ORTHO05D010844 1.6e-06 59.3 170 34.7
Thhalv10019657m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 2.7e-06 58.5 293 32.1
BcaNung04641 Brassica carinata HOM05D009813 ORTHO05D011936 3.5e-06 58.2 203 32.5


User provided reference genes

Program Settings