Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 2.2e-67 258.8 133 100.0
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 6.1e-57 224.2 133 87.2
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 6.7e-56 220.7 133 86.5
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 1.7e-54 216.1 133 85.0
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 8.2e-54 213.8 133 83.5
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 1.8e-53 212.6 133 85.7
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 4.1e-53 211.5 133 82.7
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 9.1e-53 210.3 133 81.2
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 1.7e-51 206.1 133 80.5
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.7e-51 206.1 133 80.5
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 2.9e-51 205.3 133 81.2
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 3.8e-51 204.9 133 78.9
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.8e-51 204.9 133 81.2
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.8e-51 204.9 133 81.2
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 8.5e-51 203.8 133 79.7
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 9.4e-50 200.3 133 76.7
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 9.4e-50 200.3 133 77.4
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 2.3e-48 195.7 133 80.5
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 3.0e-48 195.3 133 79.7
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 3.9e-48 194.9 135 77.8
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 8.8e-48 193.7 133 78.2
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 1.1e-47 193.4 134 75.4
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 3.3e-47 191.8 135 76.3
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 3.3e-47 191.8 135 75.6
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 3.3e-47 191.8 132 75.0
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 4.4e-47 191.4 135 74.1
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 5.7e-47 191.0 133 74.4
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 9.7e-47 190.3 133 75.2
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.3e-46 189.9 134 75.4
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.8e-46 188.7 134 75.4
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 3.7e-46 188.3 135 75.6
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 1.4e-45 186.4 134 76.9
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 1.8e-45 186.0 135 72.6
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 1.8e-45 186.0 133 73.7
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 2.4e-45 185.7 133 73.7
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 2.4e-45 185.7 133 72.9
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 4.1e-45 184.9 133 71.4
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 4.1e-45 184.9 135 75.6
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 4.1e-45 184.9 133 73.7
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 4.1e-45 184.9 134 75.4
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 9.1e-45 183.7 135 71.1
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 9.1e-45 183.7 133 69.2
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 9.1e-45 183.7 133 69.2
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 2.6e-44 182.2 135 74.1
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 3.5e-44 181.8 135 74.8
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 3.5e-44 181.8 133 71.4
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 5.9e-44 181.0 134 74.6
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 7.7e-44 180.6 134 70.1
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 1.0e-43 180.3 136 72.8
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 1.3e-43 179.9 134 73.1
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.3e-43 179.9 133 68.4
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 2.2e-43 179.1 134 72.4
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 2.9e-43 178.7 135 71.1
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 2.9e-43 178.7 135 71.9
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 3.8e-43 178.3 122 76.2
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.8e-43 178.3 136 72.1
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.8e-43 178.3 136 72.1
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.0e-43 177.9 136 72.1
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.0e-43 177.9 136 72.1
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.0e-43 177.9 136 72.1
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 5.0e-43 177.9 135 72.6
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 6.5e-43 177.6 128 72.7
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.5e-43 177.6 135 72.6
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 6.5e-43 177.6 135 72.6
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 6.5e-43 177.6 135 70.4
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 1.1e-42 176.8 133 69.9
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 71.3
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 1.4e-42 176.4 133 69.2
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 1.4e-42 176.4 133 72.2
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.4e-42 176.4 135 72.6
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.9e-42 176.0 133 72.9
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.9e-42 176.0 135 69.6
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 1.9e-42 176.0 135 73.3
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.9e-42 176.0 135 73.3
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.9e-42 176.0 105 84.8
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 2.5e-42 175.6 135 69.6
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.2e-42 175.3 135 71.9
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 3.2e-42 175.3 135 71.9
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.5e-42 174.5 133 69.9
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 9.4e-42 173.7 134 66.4
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.2e-41 173.3 135 70.4
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 2.1e-41 172.6 130 72.3
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 2.7e-41 172.2 133 66.2
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 2.7e-41 172.2 128 71.9
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 6.1e-41 171.0 115 75.7
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.1e-41 171.0 135 70.4
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.0e-40 170.2 134 66.4
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.4e-40 169.9 133 67.7
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 1.8e-40 169.5 135 71.9
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 2.3e-40 169.1 133 66.9
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 2.3e-40 169.1 137 66.4
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 3.0e-40 168.7 134 67.9
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 5.2e-40 167.9 111 80.2
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 6.7e-40 167.5 128 68.0
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.1e-39 166.8 134 64.9
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 1.5e-39 166.4 124 71.0
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 2.0e-39 166.0 123 69.9
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 4.4e-39 164.9 133 65.4
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.3e-38 163.3 134 63.4
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.7e-38 162.9 136 68.4
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 2.8e-38 162.2 115 74.8
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 2.8e-38 162.2 115 74.8
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 2.8e-38 162.2 115 74.8
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 2.8e-38 162.2 115 74.8
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.8e-38 162.2 112 74.1
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 4.8e-38 161.4 102 79.4
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 1.4e-37 159.8 132 65.2
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 4.1e-37 158.3 133 63.2
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 1.6e-36 156.4 121 71.9
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 3.5e-36 155.2 133 63.9
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.9e-36 154.5 91 81.3
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.7e-35 152.9 133 63.2
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 6.5e-35 151.0 100 77.0
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 1.1e-34 150.2 91 80.2
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 1.6e-33 146.4 98 77.6
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 2.1e-33 146.0 118 67.8
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 2.7e-33 145.6 91 76.9
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.0e-32 143.7 134 56.7
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 4.0e-32 141.7 135 60.7
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.2e-32 141.4 117 63.2
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.8e-32 141.0 123 63.4
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 8.8e-32 140.6 105 64.8
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 4.4e-31 138.3 133 59.4
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 9.1e-29 130.6 134 53.7
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 8.5e-27 124.0 117 56.4
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.5e-26 123.2 121 62.0
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.8e-22 109.0 94 66.0
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.4e-21 105.9 55 89.1
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 5.9e-20 101.3 92 56.5
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 1.0e-19 100.5 108 50.9
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 3.3e-18 95.5 116 48.3
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 1.6e-17 93.2 81 58.0
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 6.1e-17 91.3 105 48.6
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.0e-15 86.3 52 75.0
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.7e-12 75.9 92 50.0
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 5.0e-11 71.6 117 44.4
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 2.5e-10 69.3 99 41.4
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.4e-08 63.5 141 33.3
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.5e-07 60.1 81 54.3


User provided reference genes

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