Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 1.3e-232 809.3 381 100.0
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 1.6e-203 712.6 379 88.1
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 1.7e-197 692.6 380 86.1
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 7.5e-185 650.6 384 80.5
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 9.8e-185 650.2 383 80.4
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 1.7e-181 639.4 385 76.6
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 1.6e-179 632.9 383 77.8
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 4.0e-178 628.2 426 70.9
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 5.2e-162 574.7 382 72.5
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 1.6e-158 563.1 379 69.7
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 3.6e-155 552.0 339 73.2
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 4.7e-155 551.6 378 69.3
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 1.2e-153 547.0 378 67.5
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 9.9e-153 543.9 378 67.2
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 2.9e-152 542.3 377 64.7
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 8.4e-152 540.8 369 68.0
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 2.1e-150 536.2 378 65.6
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 1.3e-149 533.5 371 67.4
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 1.7e-149 533.1 378 66.4
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 3.9e-149 531.9 378 66.1
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 1.5e-148 530.0 416 62.7
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 1.3e-147 526.9 378 65.6
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 2.1e-147 526.2 377 63.4
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 3.6e-147 525.4 380 66.1
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 1.8e-146 523.1 355 66.8
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 4.5e-145 518.5 339 69.3
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 4.5e-145 518.5 368 66.0
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 2.1e-142 509.6 338 67.5
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 3.5e-142 508.8 358 64.5
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 1.8e-141 506.5 367 64.3
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 5.1e-141 505.0 345 66.4
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 8.7e-141 504.2 380 63.7
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 2.5e-140 502.7 304 72.7
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 7.4e-140 501.1 430 56.5
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 3.7e-139 498.8 377 62.9
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 3.7e-139 498.8 324 68.5
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 3.1e-138 495.7 359 63.8
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 3.1e-138 495.7 373 62.5
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 4.0e-138 495.4 344 66.0
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 6.9e-138 494.6 343 64.1
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 9.0e-138 494.2 343 63.8
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 2.0e-137 493.0 334 65.3
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 2.6e-137 492.7 343 63.8
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 5.8e-137 491.5 343 64.7
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 2.9e-136 489.2 304 71.7
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 2.5e-135 486.1 375 60.0
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 4.2e-135 485.3 378 60.1
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 6.9e-130 468.0 328 66.8
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 1.2e-129 467.2 340 65.0
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 8.4e-128 461.1 370 58.4
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 1.2e-126 457.2 327 62.7
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 2.7e-126 456.1 296 68.6
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 3.9e-125 452.2 328 66.5
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 9.7e-124 447.6 325 64.6
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 4.8e-123 445.3 292 71.2
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 6.3e-123 444.9 316 69.6
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 8.2e-123 444.5 343 60.6
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 1.4e-122 443.7 275 71.3
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 1.8e-122 443.4 293 70.3
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 2.6e-121 439.5 339 61.1
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 8.5e-120 434.5 363 60.3
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 4.6e-118 428.7 370 58.6
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 1.1e-116 424.1 370 55.9
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 1.8e-114 416.8 310 64.5
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 1.4e-111 407.1 389 54.5
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 5.5e-111 405.2 382 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 3.8e-104 382.5 329 54.1
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 3.8e-104 382.5 326 52.5
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 5.2e-101 372.1 368 50.3
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 3.3e-100 369.4 242 68.6
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 1.3e-96 357.5 317 52.4
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 6.5e-96 355.1 212 83.5
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 1.4e-77 294.3 144 90.3
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 7.8e-73 278.5 343 40.8
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 1.2e-62 244.6 388 35.8
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 5.6e-55 219.2 169 61.5
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 3.0e-48 196.8 183 51.9
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 1.8e-45 187.6 166 55.4
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 5.2e-45 186.0 129 64.3
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 9.9e-36 155.2 160 53.1
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 7.9e-33 145.6 250 34.8
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 1.4e-26 124.8 90 65.6
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 5.3e-21 106.3 61 78.7
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 4.5e-20 103.2 87 55.2
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 1.9e-15 87.8 163 33.7
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 1.6e-09 68.2 44 68.2
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 5.7e-07 59.7 44 68.2
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 8.2e-06 55.8 41 53.7


User provided reference genes

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