Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25286_v3 Cicer arietinum L. HOM05D008057 ORTHO05D003476 1.6e-211 739.2 383 100.0
Psat1g117960 Pisum sativum HOM05D008057 ORTHO05D003476 5.4e-98 362.1 393 57.8
Glyma.09G160700 Glycine max HOM05D008057 ORTHO05D003476 3.5e-89 332.8 384 56.2
Medtr6g069010 Medicago truncatula HOM05D008057 ORTHO05D003476 1.9e-87 327.0 379 54.1
Lalb_Chr14g0370111 Lupinus albus HOM05D008057 ORTHO05D003476 3.7e-83 312.8 395 52.7
Glyma.16G210200 Glycine max HOM05D008057 ORTHO05D003476 1.6e-81 307.4 392 52.3
VMungo0464G0225 Vigna mungo HOM05D008057 ORTHO05D003476 3.3e-79 299.7 394 49.0
Lj2g0026608 Lotus japonicus HOM05D008057 ORTHO05D003476 5.6e-79 298.9 377 49.9
Phvul.004G136200 Phaseolus vulgaris HOM05D008057 ORTHO05D003476 3.1e-77 293.1 395 50.4
arahy.Tifrunner.gnm1.ann1.1W7ASM Arachis hypogaea HOM05D008057 ORTHO05D003476 2.0e-68 263.8 380 45.0
arahy.Tifrunner.gnm1.ann1.RQNS35 Arachis hypogaea HOM05D008057 ORTHO05D003476 4.4e-68 262.7 380 44.2
TPR.G31356 Trifolium pratense HOM05D008057 ORTHO05D003476 6.0e-65 252.3 379 46.2
Psat6g139960 Pisum sativum HOM05D003187 ORTHO05D003630 1.5e-20 104.8 118 55.9
Cfa017812 Carpinus fangiana HOM05D008057 ORTHO05D003476 3.2e-18 97.1 376 28.7
TWI81G0899 Tripterygium wilfordii HOM05D008057 ORTHO05D003476 6.3e-14 82.8 388 26.8
Hma1.2p1_0016F.1_g010880 Hydrangea macrophylla HOM05D008057 ORTHO05D003476 3.1e-13 80.5 174 33.9
Sabra18G0127300 Salix brachista HOM05D008057 ORTHO05D003476 1.2e-12 78.6 376 26.9
COL.COLO4_33681 Corchorus olitorius HOM05D002656 ORTHO05D003062 7.7e-12 75.9 375 26.7
Atru.chr9.28 Acer truncatum HOM05D008057 ORTHO05D003476 1.3e-11 75.1 379 26.1
Psat5g043880 Pisum sativum HOM05D026839 ORTHO05D003476 1.3e-11 75.1 96 52.1
CiPaw.16G075800 Carya illinoinensis HOM05D008057 ORTHO05D003476 1.7e-11 74.7 376 26.6
Dinv22201 Davidia involucrata HOM05D008057 ORTHO05D003476 2.9e-11 73.9 378 23.5
Gohir.A03G090600 Gossypium hirsutum HOM05D008057 ORTHO05D003476 2.9e-11 73.9 377 26.0
Haze_18401 Corylus avellana HOM05D008057 ORTHO05D003476 5.0e-11 73.2 183 36.6
Ciclev10020800m.g Citrus clementina HOM05D008057 ORTHO05D003476 6.5e-11 72.8 376 26.6
Gohir.D02G118700 Gossypium hirsutum HOM05D008057 ORTHO05D003476 6.5e-11 72.8 376 25.8
Gorai.005G135100 Gossypium raimondii HOM05D008057 ORTHO05D003476 6.5e-11 72.8 376 25.8
Potri.018G151900 Populus trichocarpa HOM05D008057 ORTHO05D003476 6.5e-11 72.8 150 39.3
DCAR_014755 Daucus carota HOM05D008057 ORTHO05D003476 4.7e-09 66.6 168 31.0
Duzib068G0937 Durio zibethinus HOM05D008057 ORTHO05D003476 7.9e-09 65.9 45 64.4
FAN18G3766 Fragaria x ananassa HOM05D015681 ORTHO05D003476 7.9e-09 65.9 376 29.0
Cpa.g.sc124.3 Carica papaya HOM05D008057 ORTHO05D003476 1.4e-08 65.1 121 33.1
Oeu050291.1 Olea europaea HOM05D008057 ORTHO05D003476 1.4e-08 65.1 97 42.3
Sc12g0007990 Simmondsia chinensis HOM05D008057 ORTHO05D003476 1.4e-08 65.1 43 67.4
GSVIVG01024238001 Vitis vinifera HOM05D008057 ORTHO05D003476 3.0e-08 63.9 376 23.1
FvH4_5g27110 Fragaria vesca HOM05D015681 ORTHO05D003476 5.2e-08 63.2 378 28.8
FAN13G2350 Fragaria x ananassa HOM05D015681 ORTHO05D003476 5.2e-08 63.2 49 63.3
Eucgr.K02337 Eucalyptus grandis HOM05D008057 ORTHO05D003476 6.7e-08 62.8 109 37.6
SGA_v2.0_scaffold14G06996 Striga asiatica HOM05D008057 ORTHO05D003476 6.7e-08 62.8 105 37.1
FAN08G2522 Fragaria x ananassa HOM05D015681 ORTHO05D003476 1.1e-07 62.0 377 28.9
MBI03_g11904_MAGBIO Magnolia biondii HOM05D008057 ORTHO05D003476 1.1e-07 62.0 376 26.1
MD10G1047400 Malus domestica HOM05D015681 ORTHO05D003476 1.1e-07 62.0 43 55.8
Psat3g181880 Pisum sativum HOM05D026839 ORTHO05D003476 1.1e-07 62.0 89 48.3
Psat6g205960 Pisum sativum HOM05D026839 ORTHO05D003476 1.1e-07 62.0 89 48.3
QL10p035701 Quercus lobata HOM05D008057 ORTHO05D003476 1.1e-07 62.0 48 54.2
Psat3g181920 Pisum sativum HOM05D026839 ORTHO05D003476 2.0e-07 61.2 89 48.3
vmacro12841 Vaccinium macrocarpon HOM05D008057 ORTHO05D003476 2.0e-07 61.2 64 51.6
MSTRG.22259 Avicennia marina HOM05D008057 ORTHO05D003476 3.3e-07 60.5 53 50.9
Sed0004109 Sechium edule HOM05D008057 ORTHO05D003476 3.3e-07 60.5 78 38.5
FAN04G2538 Fragaria x ananassa HOM05D015681 ORTHO05D003476 5.7e-07 59.7 377 28.6
TAR311G0002 Trochodendron aralioides HOM05D008057 ORTHO05D003476 5.7e-07 59.7 210 27.1
Cc00_g01550 Coffea canephora HOM05D008057 ORTHO05D003476 9.7e-07 58.9 376 24.2
CDE04G2158 Ceratophyllum demersum HOM05D008057 ORTHO05D003476 1.3e-06 58.5 43 55.8
Lsat_1_v5_gn_8_540 Lactuca sativa HOM05D008057 ORTHO05D003476 1.3e-06 58.5 85 35.3
SGA_v2.0_scaffold28G11776 Striga asiatica HOM05D008057 ORTHO05D003476 1.3e-06 58.5 106 33.0
Rhsim10G0138900 Rhododendron simsii HOM05D008057 ORTHO05D003476 1.7e-06 58.2 169 30.8
Hund06726 Selenicereus undatus HOM05D008057 ORTHO05D003476 1.7e-06 58.2 408 25.2
RcHm_v2.0_Chr7g0218101 Rosa chinensis HOM05D015681 ORTHO05D003476 2.8e-06 57.4 399 26.1
AL8G34310 Arabidopsis lyrata HOM05D012436 ORTHO05D003476 4.8e-06 56.6 38 63.2


User provided reference genes

Program Settings