Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 3.1e-309 1064.3 537 100.0
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 4.6e-220 768.1 488 80.7
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 2.8e-217 758.8 491 80.2
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 9.2e-213 743.8 479 81.0
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 6.4e-206 721.1 488 75.4
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 3.0e-195 685.6 484 73.1
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 1.4e-192 676.8 488 71.5
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 1.3e-190 670.2 487 70.8
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 1.1e-189 667.2 487 70.6
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 4.6e-188 661.8 487 70.6
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 2.1e-185 652.9 401 82.5
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 4.5e-175 618.6 486 67.5
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 9.0e-160 567.8 480 61.2
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 1.8e-147 526.9 480 58.8
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 3.3e-146 522.7 485 56.5
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 5.7e-146 521.9 486 55.8
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 3.1e-144 516.2 500 59.2
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 5.9e-135 485.3 499 54.7
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 7.7e-135 485.0 488 54.7
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 2.5e-133 479.9 482 54.6
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 3.2e-133 479.6 485 53.4
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 9.4e-133 478.0 489 55.8
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.3e-130 469.5 482 55.2
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 5.7e-130 468.8 516 51.2
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 6.3e-129 465.3 480 52.7
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 7.7e-127 458.4 482 53.7
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 7.7e-127 458.4 480 52.7
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 1.7e-126 457.2 490 52.2
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 2.9e-126 456.4 480 52.3
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 3.8e-126 456.1 480 52.7
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 6.5e-126 455.3 516 49.8
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 1.1e-125 454.5 481 51.6
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 1.9e-125 453.8 483 52.2
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 4.2e-125 452.6 478 54.0
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 7.2e-125 451.8 478 55.0
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 1.2e-124 451.1 482 51.2
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.6e-124 450.7 478 54.8
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 1.6e-124 450.7 489 51.9
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 6.1e-124 448.7 483 53.8
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.8e-123 447.2 480 53.8
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 3.0e-123 446.4 483 53.4
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 1.5e-122 444.1 483 53.2
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 1.8e-120 437.2 480 51.0
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 4.1e-120 436.0 482 49.0
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 6.5e-118 428.7 480 51.0
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 1.1e-117 427.9 505 48.7
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 1.5e-117 427.6 481 51.1
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 3.6e-116 422.9 487 49.1
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.2e-113 413.7 513 48.3
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 1.4e-112 411.0 486 49.0
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 5.4e-112 409.1 481 48.6
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 1.2e-111 407.9 487 49.3
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 2.0e-111 407.1 485 49.9
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 3.5e-111 406.4 484 47.9
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 4.5e-111 406.0 487 49.5
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 6.6e-110 402.1 481 45.1
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 6.6e-110 402.1 428 52.8
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 1.1e-109 401.4 488 48.0
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 1.5e-109 401.0 490 49.8
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 3.3e-109 399.8 490 48.2
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 7.3e-109 398.7 488 48.2
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 9.5e-109 398.3 487 46.4
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 1.2e-108 397.9 486 47.3
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 2.8e-108 396.7 477 45.1
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 8.0e-108 395.2 494 46.2
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 4.0e-107 392.9 478 45.6
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 1.2e-106 391.3 556 43.3
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.8e-104 384.0 422 47.6
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 2.4e-104 383.6 488 47.3
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 2.4e-104 383.6 486 45.9
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 7.0e-104 382.1 487 47.2
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 7.0e-104 382.1 497 45.1
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 1.2e-103 381.3 489 44.2
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 1.2e-103 381.3 243 80.7
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 1.3e-102 377.9 484 49.0
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 2.3e-102 377.1 487 47.8
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 3.0e-102 376.7 483 43.9
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 3.0e-102 376.7 492 46.7
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 5.0e-102 375.9 493 47.3
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 1.1e-101 374.8 488 46.9
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 7.3e-101 372.1 486 45.9
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 2.8e-100 370.2 503 45.1
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 8.0e-100 368.6 431 49.0
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 4.0e-99 366.3 486 45.9
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 3.4e-90 336.7 478 44.8
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 2.2e-89 334.0 390 48.5
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 3.7e-89 333.2 439 43.3
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 2.1e-87 327.4 412 46.8
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.3e-86 323.9 379 51.2
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 3.3e-85 320.1 263 63.9
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 1.1e-80 305.1 493 40.0
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 1.6e-79 301.2 476 40.8
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 1.8e-75 287.7 481 39.9
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 5.8e-74 282.7 450 38.2
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 1.5e-69 268.1 481 38.5
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 2.7e-63 247.3 481 36.2
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.6e-60 238.0 502 34.9
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 8.1e-60 235.7 183 64.5
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 2.0e-58 231.1 321 45.5
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.4e-56 224.9 150 69.3
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 4.2e-56 223.4 302 40.1
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 5.5e-56 223.0 284 46.1
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 5.1e-54 216.5 524 32.3
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.1e-53 215.3 219 54.8
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 3.7e-52 210.3 348 40.8
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 5.3e-51 206.5 118 85.6
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 1.7e-49 201.4 137 78.8
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 2.3e-46 191.0 510 29.2
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 3.0e-46 190.7 479 31.7
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 1.4e-40 171.8 135 67.4
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 1.0e-38 165.6 102 76.5
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 7.9e-31 139.4 102 67.6
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 1.4e-27 128.6 149 41.6
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 1.0e-17 95.9 108 51.9
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.5e-16 92.0 139 38.1
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 2.5e-16 91.3 48 87.5
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 2.1e-15 88.2 50 80.0
Medtr6g471100 Medicago truncatula HOM05D000162 ORTHO05D000090 4.7e-15 87.0 170 42.4
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.0e-14 85.9 61 67.2
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 8.5e-09 66.2 48 64.6
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 1.2e-07 62.4 46 63.0
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 5.2e-06 57.0 49 59.2


User provided reference genes

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