Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25261_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 8.1e-16 89.4 41 100.0
Ca_25378_v3 Cicer arietinum L. HOM05D000331 ORTHO05D012481 1.3e-13 82.0 38 97.4
Ca_12769_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 2.9e-13 80.9 38 94.7
Ca_22790_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 2.9e-13 80.9 38 94.7
Ca_18078_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 1.1e-12 79.0 38 92.1
Ca_25301_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 1.9e-12 78.2 38 92.1
Ca_12398_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 4.2e-12 77.0 41 85.4
Ca_25293_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 4.2e-12 77.0 38 92.1
Ca_12721_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 5.4e-12 76.6 38 92.1
Ca_04145_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 7.9e-11 72.8 38 84.2
Ca_19253_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 3.0e-10 70.9 38 81.6
Medtr6g077800 Medicago truncatula HOM05D000162 ORTHO05D000090 5.1e-10 70.1 41 75.6
Medtr6g079830 Medicago truncatula HOM05D000162 ORTHO05D000090 5.1e-10 70.1 41 75.6
Medtr6g079920 Medicago truncatula HOM05D000162 ORTHO05D000090 5.1e-10 70.1 41 75.6
Medtr2g035630 Medicago truncatula HOM05D000162 ORTHO05D000090 1.6e-08 65.1 40 70.0
Medtr6g079270 Medicago truncatula HOM05D011211 ORTHO05D012481 4.8e-08 63.5 41 63.4
Medtr4g107180 Medicago truncatula HOM05D010072 ORTHO05D000090 8.1e-08 62.8 41 63.4
Medtr6g079300 Medicago truncatula HOM05D011211 ORTHO05D012481 8.1e-08 62.8 40 70.0
Ca_31344_v3 Cicer arietinum L. HOM05D011211 ORTHO05D012481 1.4e-07 62.0 38 65.8
VMungo0331G1933 Vigna mungo HOM05D000162 ORTHO05D000090 1.4e-07 62.0 41 68.3
VMungo0331G1525 Vigna mungo HOM05D000162 ORTHO05D000090 1.8e-07 61.6 41 70.7
Medtr6g079310 Medicago truncatula HOM05D000162 ORTHO05D000090 3.1e-07 60.8 38 73.7
Medtr0054s0140 Medicago truncatula HOM05D000162 ORTHO05D000090 5.3e-07 60.1 41 65.9
Glyma.16G160200 Glycine max HOM05D011211 ORTHO05D012481 6.9e-07 59.7 41 61.0
Medtr3g448620 Medicago truncatula HOM05D000162 ORTHO05D000090 6.9e-07 59.7 40 62.5
Glyma.16G160700 Glycine max HOM05D000162 ORTHO05D000090 1.2e-06 58.9 41 63.4
Medtr6g077540 Medicago truncatula HOM05D000162 ORTHO05D000090 1.2e-06 58.9 40 65.0
VMungo0392G0001 Vigna mungo HOM05D000162 ORTHO05D000090 1.5e-06 58.5 41 63.4
Ca_25325_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 2.0e-06 58.2 41 58.5
Glyma.16G161900 Glycine max HOM05D000162 ORTHO05D000090 2.6e-06 57.8 40 60.0
Glyma.09G256600 Glycine max HOM05D000162 ORTHO05D000090 4.5e-06 57.0 38 63.2
Glyma.16G162000 Glycine max HOM05D000162 ORTHO05D000090 4.5e-06 57.0 38 60.5
Medtr6g065540 Medicago truncatula HOM05D000162 ORTHO05D000090 4.5e-06 57.0 38 68.4
Psat7g025800 Pisum sativum HOM05D011211 ORTHO05D012481 5.8e-06 56.6 41 63.4
VMungo0331G2045 Vigna mungo HOM05D000162 ORTHO05D000090 5.8e-06 56.6 41 63.4
Glyma.16G162100 Glycine max HOM05D000162 ORTHO05D000090 7.6e-06 56.2 40 57.5
Medtr6g079460 Medicago truncatula HOM05D000162 ORTHO05D000090 7.6e-06 56.2 38 60.5
arahy.Tifrunner.gnm1.ann1.U32GI2 Arachis hypogaea HOM05D000162 ORTHO05D000090 9.9e-06 55.8 40 60.0
Ca_25323_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 9.9e-06 55.8 41 56.1
Glyma.16G139800 Glycine max HOM05D000162 ORTHO05D000090 9.9e-06 55.8 41 56.1
VMungo0331G0296 Vigna mungo HOM05D000162 ORTHO05D000090 9.9e-06 55.8 38 65.8


User provided reference genes

Program Settings