Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25228_v3 Cicer arietinum L. HOM05D005482 ORTHO05D006502 0.0e+00 1099.7 567 100.0
Psat3g169840 Pisum sativum HOM05D005482 ORTHO05D006502 2.4e-219 765.8 568 75.2
Medtr5g031750 Medicago truncatula HOM05D005482 ORTHO05D006502 1.0e-201 707.2 569 70.5
Lj2g0006088 Lotus japonicus HOM05D005482 ORTHO05D006502 6.4e-172 608.2 605 59.2
Glyma.09G200000 Glycine max HOM05D005482 ORTHO05D006502 4.6e-170 602.1 607 59.3
VMungo1215G0139 Vigna mungo HOM05D005482 ORTHO05D006502 6.2e-167 591.7 570 60.0
Glyma.01G021600 Glycine max HOM05D005482 ORTHO05D006502 5.8e-165 585.1 583 60.2
Phvul.002G145800 Phaseolus vulgaris HOM05D005482 ORTHO05D006502 1.3e-164 583.9 575 59.3
arahy.Tifrunner.gnm1.ann1.52LQAS Arachis hypogaea HOM05D005482 ORTHO05D006502 7.3e-160 568.2 660 52.4
arahy.Tifrunner.gnm1.ann1.HVQN9F Arachis hypogaea HOM05D005482 ORTHO05D006502 7.3e-160 568.2 660 52.4
Lalb_Chr16g0381591 Lupinus albus HOM05D005482 ORTHO05D006502 1.9e-152 543.5 596 55.0
MD01G1040900 Malus domestica HOM05D005482 ORTHO05D006502 2.5e-144 516.5 612 52.1
QL06p035944 Quercus lobata HOM05D005482 ORTHO05D006502 9.0e-142 508.1 610 51.1
Prupe.6G203300 Prunus persica HOM05D005482 ORTHO05D006502 1.3e-140 504.2 619 50.4
COL.COLO4_27370 Corchorus olitorius HOM05D005482 ORTHO05D006502 1.4e-139 500.7 607 48.8
TPR.G36831 Trifolium pratense HOM05D005482 ORTHO05D006502 1.2e-138 497.7 413 69.0
Thecc.01G089100 Theobroma cacao HOM05D005482 ORTHO05D006502 3.5e-138 496.1 604 49.5
Manes.12G125300 Manihot esculenta HOM05D005482 ORTHO05D006502 1.3e-137 494.2 599 50.8
Duzib264G1263 Durio zibethinus HOM05D005482 ORTHO05D006502 3.9e-137 492.7 588 50.0
Cfa006872 Carpinus fangiana HOM05D005482 ORTHO05D006502 1.5e-136 490.7 617 48.8
MD15G1310400 Malus domestica HOM05D005482 ORTHO05D006502 4.3e-136 489.2 619 50.4
Dinv36943 Davidia involucrata HOM05D005482 ORTHO05D006502 1.3e-135 487.6 604 49.8
Eucgr.H02447 Eucalyptus grandis HOM05D005482 ORTHO05D006502 2.2e-132 476.9 622 48.2
FAN19G3176 Fragaria x ananassa HOM05D005482 ORTHO05D006502 7.1e-131 471.9 609 49.6
FAN28G0477 Fragaria x ananassa HOM05D005482 ORTHO05D006502 1.2e-130 471.1 613 49.1
Gorai.008G093000 Gossypium raimondii HOM05D005482 ORTHO05D006502 1.2e-130 471.1 600 48.0
FvH4_1g19490 Fragaria vesca HOM05D005482 ORTHO05D006502 1.6e-130 470.7 609 49.6
Gohir.A12G084900 Gossypium hirsutum HOM05D005482 ORTHO05D006502 3.5e-130 469.5 600 47.7
Gohir.D12G079700 Gossypium hirsutum HOM05D005482 ORTHO05D006502 4.6e-130 469.2 602 47.8
FAN23G0007 Fragaria x ananassa HOM05D005482 ORTHO05D006502 7.9e-130 468.4 609 48.9
Nitab4.5_0000128g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 2.3e-129 466.8 604 48.5
TWI74G1080 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 4.3e-128 462.6 595 48.1
CiPaw.08G141000 Carya illinoinensis HOM05D005482 ORTHO05D006502 7.4e-128 461.8 615 47.5
PGSC0003DMG400014586 Solanum tuberosum HOM05D005482 ORTHO05D006502 1.6e-127 460.7 611 47.6
Nitab4.5_0007769g0050 Nicotiana tabacum HOM05D005482 ORTHO05D006502 1.1e-126 458.0 599 48.4
Potri.007G011800 Populus trichocarpa HOM05D005482 ORTHO05D006502 3.1e-126 456.4 575 48.5
CAN.G581.10 Capsicum annuum HOM05D005482 ORTHO05D006502 2.6e-125 453.4 602 48.5
Hma1.2p1_0369F.1_g137400 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 2.6e-125 453.4 605 47.4
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 1.3e-124 451.1 639 44.4
TWI77G0993 Tripterygium wilfordii HOM05D005482 ORTHO05D006502 3.8e-124 449.5 599 46.7
TAR625G0934 Trochodendron aralioides HOM05D005482 ORTHO05D006502 4.9e-124 449.1 601 47.9
Sed0012268 Sechium edule HOM05D005482 ORTHO05D006502 8.4e-124 448.4 614 44.5
Sabra07G0009200 Salix brachista HOM05D005482 ORTHO05D006502 3.2e-123 446.4 589 46.9
Cc07_g13970 Coffea canephora HOM05D005482 ORTHO05D006502 4.2e-123 446.0 619 45.7
Nn1g05603 Nelumbo nucifera HOM05D005482 ORTHO05D006502 2.1e-122 443.7 589 46.3
vmacro18548 Vaccinium macrocarpon HOM05D005482 ORTHO05D006502 1.5e-120 437.6 628 44.3
SGA_v2.0_scaffold108G30927 Striga asiatica HOM05D005482 ORTHO05D006502 1.9e-120 437.2 628 44.7
Peaxi162Scf01142g00001 Petunia axillaris HOM05D005482 ORTHO05D006502 2.5e-120 436.8 599 47.4
Cpa.g.sc55.13 Carica papaya HOM05D005482 ORTHO05D006502 5.7e-120 435.6 618 45.6
CsaV3_6G044940 Cucumis sativus L. HOM05D005482 ORTHO05D006502 3.7e-119 433.0 619 43.6
ClCG01G018310 Citrullus lanatus HOM05D005482 ORTHO05D006502 9.0e-118 428.3 615 43.6
MSTRG.23386 Avicennia marina HOM05D005482 ORTHO05D006502 2.0e-117 427.2 604 46.0
CANSAT01G3178 Cannabis sativa HOM05D005482 ORTHO05D006502 2.6e-117 426.8 679 43.3
FAN26G3253 Fragaria x ananassa HOM05D005482 ORTHO05D006502 2.6e-117 426.8 576 47.9
PGR102G1704 Punica granatum HOM05D005482 ORTHO05D006502 2.6e-117 426.8 599 45.1
RcHm_v2.0_Chr2g0110941 Rosa chinensis HOM05D005482 ORTHO05D006502 1.3e-116 424.5 576 47.2
CiPaw.07G046300 Carya illinoinensis HOM05D005482 ORTHO05D006502 3.2e-115 419.9 570 48.1
Rhsim08G0017200 Rhododendron simsii HOM05D005482 ORTHO05D006502 3.2e-115 419.9 615 43.4
HanXRQChr12g0368991 Helianthus annuus HOM05D005482 ORTHO05D006502 4.2e-115 419.5 605 44.5
Atru.chr3.724 Acer truncatum HOM05D005482 ORTHO05D006502 9.3e-115 418.3 598 44.6
Atru.chr3.678 Acer truncatum HOM05D005482 ORTHO05D006502 2.7e-114 416.8 598 44.5
Ciclev10025202m.g Citrus clementina HOM05D005482 ORTHO05D006502 2.7e-114 416.8 616 42.2
Lj2A532G30 Lonicera japonica HOM05D005482 ORTHO05D006502 1.3e-113 414.5 573 44.7
Solyc05g051370.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 2.3e-113 413.7 701 40.7
Sopen05g029760 Solanum pennellii HOM05D005482 ORTHO05D006502 2.3e-113 413.7 701 40.8
Hund16521 Selenicereus undatus HOM05D005482 ORTHO05D006502 1.6e-111 407.5 573 44.3
EL10Ac6g15187 Beta vulgaris HOM05D005482 ORTHO05D006502 1.1e-110 404.8 579 43.9
THA.LOC104798625 Tarenaya hassleriana HOM05D005482 ORTHO05D006502 6.9e-110 402.1 610 43.4
AUR62017985 Chenopodium quinoa HOM05D005482 ORTHO05D006502 1.5e-109 401.0 581 42.3
Sc03g0000430 Simmondsia chinensis HOM05D005482 ORTHO05D006502 2.6e-109 400.2 594 44.3
DCAR_003442 Daucus carota HOM05D005482 ORTHO05D006502 7.7e-109 398.7 613 43.4
Oeu042113.2 Olea europaea HOM05D005482 ORTHO05D006502 1.3e-108 397.9 614 42.2
CARHR279520 Cardamine hirsuta HOM05D005482 ORTHO05D006502 1.9e-107 394.0 614 43.5
Thhalv10003865m.g Eutrema salsugineum HOM05D005482 ORTHO05D006502 1.9e-107 394.0 604 42.4
Aqoxy5G01366 Aquilegia oxysepala HOM05D005482 ORTHO05D006502 2.5e-107 393.7 626 42.5
PSO210G6830 Papaver somniferum HOM05D005482 ORTHO05D006502 2.5e-107 393.7 611 44.0
Sabra15G0071300 Salix brachista HOM05D005482 ORTHO05D006502 1.6e-106 391.0 566 44.0
Lsat_1_v5_gn_3_62981 Lactuca sativa HOM05D005482 ORTHO05D006502 2.1e-106 390.6 593 43.3
PSO170G0154 Papaver somniferum HOM05D005482 ORTHO05D006502 2.1e-106 390.6 622 43.7
MBI16_g31257_MAGBIO Magnolia biondii HOM05D005482 ORTHO05D006502 7.9e-106 388.7 607 43.2
Ah.03g139850 Amaranthus hybridus HOM05D005482 ORTHO05D006502 8.8e-105 385.2 573 43.1
CSS0030560 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 8.8e-105 385.2 559 44.2
TPR.G7258 Trifolium pratense HOM05D005482 ORTHO05D006502 1.5e-104 384.4 241 80.1
Aa31LG3G16620 Aethionema arabicum HOM05D005482 ORTHO05D006502 2.0e-104 384.0 616 42.2
MELO3C007709.2 Cucumis melo HOM05D005482 ORTHO05D006502 7.4e-104 382.1 574 41.1
Migut.H02285 Erythranthe guttata HOM05D005482 ORTHO05D006502 1.1e-102 378.3 624 41.7
Carub.0008s2640 Capsella rubella HOM05D005482 ORTHO05D006502 1.8e-102 377.5 613 40.9
AT5G65540 Arabidopsis thaliana HOM05D005482 ORTHO05D006502 2.4e-102 377.1 612 41.8
Dinv13587 Davidia involucrata HOM05D005482 ORTHO05D006502 6.9e-102 375.6 505 48.7
Sp2g28640 Schrenkiella parvula HOM05D005482 ORTHO05D006502 6.9e-102 375.6 614 41.2
AL8G43140 Arabidopsis lyrata HOM05D005482 ORTHO05D006502 9.1e-102 375.2 613 41.6
Haze_03890 Corylus avellana HOM05D005482 ORTHO05D006502 7.7e-101 372.1 457 48.4
SalBow3G1020 Salvia bowleyana HOM05D005482 ORTHO05D006502 3.7e-95 353.2 562 43.2
A06p32390 Brassica napus HOM05D005482 ORTHO05D006502 2.2e-92 344.0 619 38.4
BraA06t26164Z Brassica rapa HOM05D005482 ORTHO05D006502 3.8e-92 343.2 619 38.4
C03p60440 Brassica napus HOM05D005482 ORTHO05D006502 9.4e-91 338.6 611 39.3
BolC3t18305H Brassica oleracea HOM05D005482 ORTHO05D006502 9.4e-91 338.6 611 39.3
ECA246G0291 Erigeron canadensis HOM05D005482 ORTHO05D006502 1.4e-86 324.7 432 45.8
Actinidia24562 Actinidia chinensis HOM05D005482 ORTHO05D006502 6.5e-84 315.8 415 46.7
HPP92_017563 Vanilla planifolia HOM05D005482 ORTHO05D006502 2.1e-82 310.8 603 37.8
unitig_736.g22591 Utricularia gibba HOM05D005482 ORTHO05D006502 2.2e-79 300.8 559 38.6
BcaC01g02786 Brassica carinata HOM05D005482 ORTHO05D006502 1.2e-74 285.0 633 35.2
Oeu017109.1 Olea europaea HOM05D005482 ORTHO05D006502 2.1e-74 284.3 402 43.8
Os03g0802300 Oryza sativa ssp. japonica HOM05D005482 ORTHO05D006502 3.0e-73 280.4 517 39.8
Zm00001eb061260 Zea mays HOM05D005482 ORTHO05D006502 2.8e-71 273.9 505 39.4
Hma1.2p1_0369F.1_g137390 Hydrangea macrophylla HOM05D005482 ORTHO05D006502 1.4e-57 228.4 359 42.3
GSVIVG01002660001 Vitis vinifera HOM05D005482 ORTHO05D006502 1.3e-52 211.8 229 54.6
GSVIVG01002523001 Vitis vinifera HOM05D005482 ORTHO05D006502 4.4e-48 196.8 290 42.8
Pp3c20_16050 Physcomitrium patens HOM05D005482 ORTHO05D006502 5.8e-40 169.9 498 29.7
AagrBONN_evm.TU.Sc2ySwM_117.475 Anthoceros agrestis HOM05D005482 ORTHO05D006502 5.4e-30 136.7 494 27.7
ATR0767G089 Amborella trichopoda HOM05D005482 ORTHO05D006502 1.6e-29 135.2 264 34.1
TAR381G1343 Trochodendron aralioides HOM05D005482 ORTHO05D006502 2.7e-29 134.4 249 39.4
CiPaw.10G105100 Carya illinoinensis HOM05D005482 ORTHO05D006502 3.9e-28 130.6 111 60.4
Haze_03887 Corylus avellana HOM05D005482 ORTHO05D006502 1.5e-27 128.6 116 57.8
CiPaw.01G172300 Carya illinoinensis HOM05D005482 ORTHO05D006502 5.8e-24 116.7 144 48.6
CDE07G2034 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 7.6e-24 116.3 96 63.5
Oeu017110.1 Olea europaea HOM05D005482 ORTHO05D006502 2.2e-23 114.8 152 48.7
CiPaw.03G215800 Carya illinoinensis HOM05D005482 ORTHO05D006502 2.9e-23 114.4 72 72.2
Solyc01g056590.2 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.1e-22 112.5 94 62.8
SMO203G0252 Selaginella moellendorffii HOM05D005482 ORTHO05D006502 4.2e-22 110.5 582 25.4
ECA246G4867 Erigeron canadensis HOM05D005482 ORTHO05D006502 7.1e-22 109.8 139 51.1
Solyc11g016980.3 Solanum lycopersicum HOM05D005482 ORTHO05D006502 1.3e-20 105.5 175 41.1
BolC3t18285H Brassica oleracea HOM05D005482 ORTHO05D006502 1.1e-19 102.4 174 37.9
CDE07G0659 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 7.4e-19 99.8 190 35.3
Mapoly0105s0033 Marchantia polymorpha HOM05D005482 ORTHO05D006502 7.4e-19 99.8 581 22.4
Actinidia28819 Actinidia chinensis HOM05D000138 ORTHO05D000078 3.1e-17 94.4 257 32.3
Sabra15G0079600 Salix brachista HOM05D005482 ORTHO05D006502 2.9e-15 87.8 78 56.4
C03p60240 Brassica napus HOM05D005482 ORTHO05D006502 1.1e-14 85.9 182 34.6
CDE07G1566 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 1.3e-12 79.0 148 41.9
BcaC01g02797 Brassica carinata HOM05D005482 ORTHO05D006502 1.8e-12 78.6 137 37.2
Glyma.11G112400 Glycine max HOM05D005482 ORTHO05D006502 3.8e-07 60.8 58 65.5
HanXRQChr04g0112001 Helianthus annuus HOM05D005482 ORTHO05D006502 4.9e-07 60.5 63 54.0
RcHm_v2.0_Chr2g0110871 Rosa chinensis HOM05D005482 ORTHO05D006502 8.4e-07 59.7 64 51.6
BcaB04g20020 Brassica carinata HOM05D005482 ORTHO05D006502 1.4e-06 58.9 64 43.8
ATR0767G001 Amborella trichopoda HOM05D005482 ORTHO05D006502 4.2e-06 57.4 154 37.0
CDE07G1819 Ceratophyllum demersum HOM05D005482 ORTHO05D006502 9.3e-06 56.2 70 40.0


User provided reference genes

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