Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25198_v3 Cicer arietinum L. HOM05D006310 ORTHO05D007768 2.6e-90 335.9 161 100.0
Psat2g137200 Pisum sativum HOM05D006310 ORTHO05D007768 1.9e-61 240.0 161 74.5
Medtr5g029910 Medicago truncatula HOM05D006310 ORTHO05D007768 1.9e-53 213.4 162 67.9
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 6.6e-46 188.3 188 59.0
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 1.2e-42 177.6 184 58.2
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 2.0e-42 176.8 169 59.8
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 2.0e-42 176.8 169 59.8
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 8.6e-38 161.4 183 54.6
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 5.6e-37 158.7 187 51.9
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 1.6e-36 157.1 187 52.9
Glyma.09G205800 Glycine max HOM05D006310 ORTHO05D007768 1.1e-35 154.5 183 53.6
Phvul.002G140000 Phaseolus vulgaris HOM05D006310 ORTHO05D007768 1.8e-35 153.7 185 51.9
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 1.2e-26 124.4 222 40.5
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 3.8e-25 119.4 197 43.7
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 6.4e-25 118.6 206 41.7
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 4.2e-24 115.9 161 46.6
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 5.4e-24 115.5 190 43.2
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 2.1e-23 113.6 202 41.1
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 4.6e-23 112.5 218 39.0
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 7.8e-23 111.7 180 42.8
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 1.7e-22 110.5 182 42.3
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 3.0e-22 109.8 174 44.3
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 3.0e-22 109.8 165 45.5
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 5.1e-22 109.0 194 39.7
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 6.6e-22 108.6 195 38.5
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 1.1e-21 107.8 203 39.9
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 4.3e-21 105.9 186 39.8
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 1.3e-20 104.4 172 42.4
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 2.8e-20 103.2 185 38.9
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 2.8e-20 103.2 190 38.4
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 3.6e-20 102.8 202 39.1
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 3.6e-20 102.8 185 38.9
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 8.1e-20 101.7 196 36.7
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 1.4e-19 100.9 204 35.8
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 4.0e-19 99.4 188 38.3
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 4.0e-19 99.4 208 37.5
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 4.0e-19 99.4 193 39.9
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 6.9e-19 98.6 193 36.8
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 1.5e-18 97.4 161 43.5
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 2.6e-18 96.7 200 39.0
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 2.6e-18 96.7 190 38.9
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 3.4e-18 96.3 187 35.3
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 4.5e-18 95.9 161 43.5
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 5.8e-18 95.5 222 33.8
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 9.9e-18 94.7 210 37.1
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 9.9e-18 94.7 202 36.1
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 1.3e-17 94.4 210 37.6
FAN08G3522 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.9e-17 93.2 161 42.9
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 4.9e-17 92.4 202 36.1
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 1.1e-16 91.3 159 42.8
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 1.4e-16 90.9 192 37.0
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 2.4e-16 90.1 194 38.1
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 2.4e-16 90.1 199 36.7
FAN04G1670 Fragaria x ananassa HOM05D006310 ORTHO05D007768 4.2e-16 89.4 161 42.2
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 7.1e-16 88.6 218 32.6
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 9.3e-16 88.2 203 36.5
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 9.3e-16 88.2 180 37.8
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 1.6e-15 87.4 224 33.5
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 1.6e-15 87.4 189 37.6
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 2.7e-15 86.7 206 34.5
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 3.5e-15 86.3 224 32.6
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 6.0e-15 85.5 178 37.1
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 1.0e-14 84.7 186 37.1
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 1.0e-14 84.7 224 32.1
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 1.3e-14 84.3 100 50.0
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 1.8e-14 84.0 207 35.3
Cc08_g03010 Coffea canephora HOM05D006310 ORTHO05D007768 3.0e-14 83.2 201 35.3
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 3.9e-14 82.8 203 31.0
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 1.1e-13 81.3 169 39.1
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 1.5e-13 80.9 183 37.2
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 3.3e-13 79.7 222 32.9
A01p09980 Brassica napus HOM05D006310 ORTHO05D007768 4.3e-13 79.3 168 37.5
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 5.6e-13 79.0 203 35.0
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 5.6e-13 79.0 207 35.3
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 7.4e-13 78.6 204 31.9
MELO3C003424.2 Cucumis melo HOM05D006310 ORTHO05D007768 9.6e-13 78.2 167 37.7
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 2.1e-12 77.0 192 32.3
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 2.1e-12 77.0 192 37.0
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 6.2e-12 75.5 160 35.0
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 8.1e-12 75.1 201 31.8
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 8.1e-12 75.1 202 31.2
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 1.4e-11 74.3 191 33.0
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 3.1e-11 73.2 196 32.1
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 3.1e-11 73.2 222 30.6
Nn1g00145 Nelumbo nucifera HOM05D006310 ORTHO05D007768 1.2e-10 71.2 209 30.6
Actinidia09184 Actinidia chinensis HOM05D006310 ORTHO05D007768 2.0e-10 70.5 191 35.6
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 2.0e-10 70.5 60 56.7
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 4.5e-10 69.3 175 32.6
BraA01t00942Z Brassica rapa HOM05D006310 ORTHO05D007768 7.6e-10 68.6 166 33.7
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 1.0e-09 68.2 196 29.6
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 1.3e-09 67.8 176 32.4
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 1.3e-09 67.8 186 33.9
BolC1t01140H Brassica oleracea HOM05D006310 ORTHO05D007768 1.3e-09 67.8 170 31.8
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 1.3e-09 67.8 193 30.1
BcaC09g51583 Brassica carinata HOM05D006310 ORTHO05D007768 1.7e-09 67.4 171 33.3
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 1.7e-09 67.4 188 31.4
C01p11780 Brassica napus HOM05D006310 ORTHO05D007768 2.2e-09 67.0 168 32.7
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 2.2e-09 67.0 186 32.8
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 2.2e-09 67.0 186 33.9
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 2.2e-09 67.0 199 32.7
HPP92_014659 Vanilla planifolia HOM05D006310 ORTHO05D007768 4.9e-09 65.9 70 50.0
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 6.4e-09 65.5 42 73.8
Ah.07g200600 Amaranthus hybridus HOM05D006310 ORTHO05D007768 1.9e-08 63.9 170 29.4
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 2.5e-08 63.5 210 31.0
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 7.1e-08 62.0 46 60.9
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 9.3e-08 61.6 42 69.0
SGA_v2.0_scaffold20G09266 Striga asiatica HOM05D006310 ORTHO05D007768 9.3e-08 61.6 60 48.3
BcaC07g38109 Brassica carinata HOM05D006310 ORTHO05D007768 1.6e-07 60.8 178 32.0
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 2.1e-07 60.5 62 54.8
HanXRQChr17g0536151 Helianthus annuus HOM05D006310 ORTHO05D007768 2.1e-07 60.5 48 56.2
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 3.5e-07 59.7 213 29.1
Peaxi162Scf00184g00001 Petunia axillaris HOM05D006310 ORTHO05D007768 7.9e-07 58.5 198 27.8
unitig_699.g19788 Utricularia gibba HOM05D006310 ORTHO05D007768 1.8e-06 57.4 51 51.0
Eucgr.E00268 Eucalyptus grandis HOM05D006310 ORTHO05D007768 2.3e-06 57.0 53 54.7
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 3.9e-06 56.2 190 27.9
arahy.Tifrunner.gnm1.ann1.ZC4B2S Arachis hypogaea HOM05D001903 ORTHO05D001847 5.1e-06 55.8 161 31.1
Eucgr.E00267 Eucalyptus grandis HOM05D006310 ORTHO05D007768 6.7e-06 55.5 59 50.8
SEGI_10096 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 6.7e-06 55.5 45 55.6
SEGI_05294 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 8.7e-06 55.1 64 45.3


User provided reference genes

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