Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 1.5e-124 449.5 231 100.0
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 2.1e-97 359.4 246 76.4
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 4.7e-97 358.2 240 79.6
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.5e-90 336.7 233 76.0
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 9.8e-87 323.9 242 70.7
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 9.8e-87 323.9 241 72.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.5e-82 310.1 245 68.6
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 5.5e-82 308.1 242 69.0
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 6.1e-81 304.7 230 70.0
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 6.1e-81 304.7 230 70.0
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 2.0e-79 299.7 227 68.3
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.4e-71 272.3 223 63.2
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 3.7e-70 268.9 223 62.3
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 6.4e-70 268.1 223 61.9
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.3e-70 267.7 196 66.8
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 4.1e-69 265.4 179 72.1
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 4.1e-69 265.4 195 66.7
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 7.0e-69 264.6 183 69.9
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 1.2e-68 263.8 207 63.8
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.2e-68 263.8 239 59.8
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.6e-68 263.5 236 59.7
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 2.0e-68 263.1 231 61.5
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.0e-68 263.1 194 66.0
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 2.0e-68 263.1 209 64.1
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 2.7e-68 262.7 212 65.1
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 3.5e-68 262.3 205 64.4
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.5e-68 262.3 195 65.6
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.3e-67 259.6 195 64.6
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.0e-67 259.2 217 63.1
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 4.3e-66 255.4 229 57.6
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 5.6e-66 255.0 221 61.1
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.2e-65 253.8 192 65.1
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-65 253.8 192 65.1
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 1.2e-65 253.8 223 58.3
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.6e-65 253.4 220 59.5
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 2.8e-65 252.7 223 58.7
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 2.8e-65 252.7 231 55.8
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.8e-65 252.7 221 60.2
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.6e-65 252.3 172 69.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 8.0e-65 251.1 185 65.9
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.8e-64 250.0 182 67.0
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 3.1e-64 249.2 194 63.9
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 6.8e-64 248.1 171 70.2
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 6.8e-64 248.1 171 69.6
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 8.9e-64 247.7 245 55.9
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 7.5e-63 244.6 239 55.6
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 9.8e-63 244.2 164 71.3
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.7e-62 243.4 217 59.0
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 2.2e-62 243.0 205 57.6
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 2.9e-62 242.7 181 65.7
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 4.9e-62 241.9 172 66.9
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 6.4e-62 241.5 206 58.3
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 6.4e-62 241.5 194 61.3
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.1e-61 240.7 214 59.3
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 4.1e-61 238.8 180 65.0
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 5.4e-61 238.4 178 66.3
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 7.0e-61 238.0 229 55.9
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 7.0e-61 238.0 246 54.5
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 7.0e-61 238.0 245 53.9
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 2.1e-60 236.5 200 61.5
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 2.7e-60 236.1 214 58.9
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 2.7e-60 236.1 200 61.0
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 7.8e-60 234.6 228 55.3
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.0e-59 234.2 172 66.9
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.0e-59 234.2 245 52.7
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.7e-59 233.4 181 63.0
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 3.0e-59 232.6 186 64.0
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 6.6e-59 231.5 200 59.5
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 6.6e-59 231.5 209 56.0
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 6.6e-59 231.5 186 63.4
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 8.6e-59 231.1 186 62.9
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.1e-58 230.7 227 55.5
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.5e-58 229.6 186 63.4
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 2.5e-58 229.6 193 57.5
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 9.5e-58 227.6 192 57.8
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.8e-57 226.1 186 63.4
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 3.6e-57 225.7 287 48.1
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 5.2e-56 221.9 172 62.8
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 2.6e-55 219.5 171 64.3
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 2.6e-55 219.5 225 55.6
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 3.4e-55 219.2 193 56.0
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.3e-54 217.2 207 57.0
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 2.9e-54 216.1 171 60.2
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 4.9e-54 215.3 192 56.8
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 6.4e-54 214.9 214 54.2
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 1.9e-53 213.4 219 53.4
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 2.4e-53 213.0 214 53.3
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 3.2e-53 212.6 194 61.9
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 9.2e-53 211.1 197 55.3
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 9.2e-53 211.1 168 63.1
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.2e-52 210.7 161 66.5
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 2.7e-52 209.5 188 55.3
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 2.5e-50 203.0 168 62.5
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 3.3e-50 202.6 174 56.3
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 7.3e-50 201.4 215 53.0
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 2.8e-49 199.5 181 56.4
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 3.1e-48 196.1 140 69.3
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 5.2e-48 195.3 183 54.6
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 3.4e-47 192.6 186 55.4
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 7.6e-47 191.4 112 83.0
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.3e-46 190.7 208 47.6
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 2.9e-46 189.5 157 59.2
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.9e-43 179.1 172 56.4
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.5e-42 177.2 136 63.2
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 7.3e-42 174.9 186 48.9
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.6e-41 173.7 115 69.6
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 3.4e-39 166.0 129 61.2
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 7.3e-34 148.3 184 40.8
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 1.3e-30 137.5 199 37.7
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.2e-29 132.5 222 38.7
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 1.2e-28 131.0 179 39.1
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.3e-25 120.9 187 34.8
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.9e-06 56.6 70 41.4


User provided reference genes

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