Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 5.5e-164 580.9 289 100.0
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 3.4e-105 385.6 304 70.1
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 1.2e-97 360.5 303 66.3
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 3.8e-88 328.9 318 61.3
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 1.1e-87 327.4 322 59.0
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 3.0e-85 319.3 314 57.0
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 4.3e-84 315.5 312 57.1
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 5.5e-79 298.5 312 54.5
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 6.1e-78 295.0 290 59.0
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 3.0e-77 292.7 325 52.6
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 3.0e-77 292.7 325 52.6
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 8.8e-77 291.2 317 53.9
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 7.0e-74 281.6 276 58.3
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 1.7e-56 223.8 322 45.7
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 2.7e-54 216.5 321 44.9
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.4e-53 214.2 318 41.2
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 1.8e-53 213.8 322 44.1
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 4.0e-53 212.6 306 42.2
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 5.2e-53 212.2 320 40.9
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.8e-53 211.8 318 40.9
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.1e-50 203.0 295 42.0
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 1.6e-49 200.7 315 40.0
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 4.2e-47 192.6 320 40.0
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 7.2e-47 191.8 307 43.0
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 1.2e-46 191.0 317 39.4
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 8.0e-46 188.3 305 38.0
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 1.4e-45 187.6 318 40.3
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 6.8e-45 185.3 317 38.8
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 6.8e-45 185.3 325 37.8
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 4.4e-44 182.6 320 39.4
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 4.4e-44 182.6 323 39.6
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.1e-42 177.9 320 38.4
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 2.4e-42 176.8 340 36.8
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 2.0e-41 173.7 242 42.6
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.0e-41 173.7 316 38.6
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 2.9e-40 169.9 314 38.5
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 3.3e-39 166.4 319 37.6
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.4e-37 161.0 319 37.0
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.4e-37 161.0 319 36.7
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 3.1e-37 159.8 306 38.9
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 5.2e-37 159.1 346 36.7
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 5.8e-36 155.6 308 36.7
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 5.8e-36 155.6 320 35.9
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 7.5e-36 155.2 305 35.1
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.7e-35 154.1 324 35.8
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 2.2e-35 153.7 325 36.6
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 2.9e-35 153.3 270 35.9
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 8.3e-35 151.8 292 37.7
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.9e-34 150.6 316 36.1
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.4e-34 150.2 285 35.8
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 5.4e-34 149.1 260 40.4
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 7.0e-34 148.7 320 35.3
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 3.9e-32 142.9 286 35.7
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 3.3e-31 139.8 315 34.6
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 9.5e-31 138.3 336 33.3
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 1.6e-30 137.5 173 49.1
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 2.8e-30 136.7 307 36.5
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 1.2e-28 131.3 299 37.5
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.2e-28 131.3 326 36.5
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 4.4e-28 129.4 302 34.1
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 1.9e-26 124.0 257 37.7
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 1.9e-26 124.0 316 30.7
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 5.4e-26 122.5 341 33.1
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 7.1e-26 122.1 300 33.3
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 1.2e-25 121.3 346 31.5
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 2.3e-24 117.1 309 32.0
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 3.0e-24 116.7 353 30.3
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 4.3e-23 112.8 351 29.3
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 5.6e-23 112.5 241 34.9
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 5.6e-23 112.5 322 32.3
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 3.6e-22 109.8 354 29.4
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 1.1e-21 108.2 312 31.4
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 1.8e-21 107.5 302 32.5
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 3.1e-21 106.7 298 31.2
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 5.2e-21 105.9 195 36.4
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 5.2e-21 105.9 302 31.8
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.3e-19 101.3 303 30.7
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 1.3e-19 101.3 335 31.0
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.7e-19 100.9 288 29.2
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 8.3e-19 98.6 313 30.0
Medtr5g029290 Medicago truncatula HOM05D007538 ORTHO05D009464 1.1e-18 98.2 131 46.6
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 4.1e-18 96.3 317 31.5
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 4.6e-17 92.8 312 28.2
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 1.0e-16 91.7 279 32.6
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 1.0e-16 91.7 323 30.0
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 2.3e-16 90.5 311 30.9
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 4.7e-14 82.8 327 26.0
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 2.4e-13 80.5 330 30.0
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 6.8e-13 79.0 155 36.8
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 1.2e-12 78.2 237 30.0
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.6e-12 77.0 286 29.7
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.8e-11 73.2 91 42.9
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 1.1e-10 71.6 283 28.6
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 5.4e-10 69.3 189 33.9


User provided reference genes

Program Settings