Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 0.0e+00 1311.6 694 100.0
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 1.4e-245 853.2 732 65.6
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 2.9e-235 818.9 710 67.7
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 1.2e-228 797.0 699 68.1
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 1.5e-202 710.3 708 60.2
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.2e-196 690.6 707 58.4
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 8.6e-195 684.5 706 57.2
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 6.6e-187 658.3 691 54.8
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 8.6e-187 657.9 710 56.6
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 2.3e-184 649.8 706 58.1
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 7.3e-178 628.2 739 54.4
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 7.3e-178 628.2 739 54.4
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 4.8e-113 412.9 729 39.6
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 3.1e-112 410.2 731 39.9
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 4.5e-111 406.4 774 41.1
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 3.8e-110 403.3 708 38.8
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 2.5e-109 400.6 743 38.2
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 4.2e-109 399.8 703 40.4
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 4.2e-109 399.8 739 38.4
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 1.4e-107 394.8 718 39.3
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 5.7e-106 389.4 727 38.0
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.3e-105 388.3 664 39.8
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 3.7e-105 386.7 729 37.4
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.1e-104 385.2 709 38.5
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 2.0e-103 380.9 730 36.6
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.9e-102 377.1 658 38.9
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.1e-101 375.2 731 37.3
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 4.2e-101 373.2 679 38.7
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 1.6e-100 371.3 670 39.1
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 8.0e-100 369.0 622 39.1
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 8.0e-100 369.0 734 37.1
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 3.9e-99 366.7 543 44.2
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 5.2e-99 366.3 622 38.7
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 1.5e-98 364.8 712 37.2
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.7e-97 361.3 715 39.3
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 3.7e-97 360.1 743 35.7
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 4.8e-97 359.8 729 38.3
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 1.5e-93 348.2 736 35.5
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 1.6e-92 344.7 723 37.8
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 7.5e-90 335.9 696 34.8
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 1.1e-88 332.0 730 34.5
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 4.1e-88 330.1 547 39.1
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 5.3e-88 329.7 734 35.8
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 3.8e-86 323.6 671 34.6
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 9.4e-85 318.9 742 34.6
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 3.6e-84 317.0 741 35.0
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 6.1e-84 316.2 745 34.2
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 6.1e-84 316.2 653 34.8
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 1.5e-82 311.6 232 71.1
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 3.4e-82 310.5 627 36.8
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 7.5e-82 309.3 682 35.0
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 2.2e-81 307.8 675 34.8
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 6.3e-81 306.2 726 34.4
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 6.3e-81 306.2 726 34.4
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 6.3e-81 306.2 726 34.4
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 6.3e-81 306.2 667 35.1
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 3.1e-80 303.9 721 33.1
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 1.6e-79 301.6 660 33.9
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 5.9e-79 299.7 916 30.3
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 1.7e-78 298.1 640 35.2
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.7e-78 298.1 746 33.8
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 2.9e-78 297.4 479 38.8
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 1.1e-77 295.4 692 35.1
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.5e-77 295.0 703 33.7
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 2.5e-77 294.3 650 34.2
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 3.3e-77 293.9 310 52.6
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 7.2e-77 292.7 711 33.2
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 1.6e-76 291.6 748 32.8
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 1.0e-75 288.9 726 34.0
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 5.7e-74 283.1 625 33.9
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 3.7e-73 280.4 742 32.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 1.4e-72 278.5 662 32.8
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 3.5e-71 273.9 304 48.4
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 1.3e-70 271.9 748 32.5
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 6.6e-70 269.6 629 33.9
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 5.6e-69 266.5 595 33.9
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 7.3e-69 266.2 649 33.6
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 1.4e-67 261.9 782 30.6
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 3.1e-67 260.8 787 30.1
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 5.2e-67 260.0 722 32.5
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 6.4e-65 253.1 644 32.5
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 1.6e-63 248.4 805 31.2
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 1.0e-62 245.7 641 32.9
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 8.6e-62 242.7 737 29.0
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 5.6e-61 240.0 741 32.1
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 4.7e-60 236.9 716 30.6
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 3.7e-57 227.3 274 47.4
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 2.7e-55 221.1 264 45.1
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 2.3e-54 218.0 544 32.0
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 1.5e-45 188.7 704 27.1
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 3.0e-38 164.5 474 27.0
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 9.6e-37 159.5 154 55.8
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 3.3e-29 134.4 354 30.2
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 2.8e-28 131.3 192 40.1
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 8.1e-28 129.8 417 30.2
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.4e-27 128.3 149 51.7
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.1e-23 115.2 227 36.1
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 1.0e-22 112.8 162 42.6
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 2.3e-22 111.7 365 25.5
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.5e-21 109.0 153 43.1
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.8e-20 104.8 134 46.3
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 9.9e-18 96.3 352 30.4
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 6.4e-17 93.6 245 30.2
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 1.6e-15 89.0 84 64.3
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 6.0e-15 87.0 256 30.5
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.0e-14 86.3 358 31.8
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 3.3e-13 81.3 297 30.3
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 1.3e-12 79.3 611 22.9
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.4e-11 75.1 87 44.8
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 2.1e-07 62.0 119 32.8
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 3.5e-07 61.2 334 25.1


User provided reference genes

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