Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.8e-84 315.8 160 100.0
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 8.1e-56 220.7 162 72.2
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.4e-55 219.9 163 76.1
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 6.0e-51 204.5 162 72.8
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 5.1e-50 201.4 159 71.7
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 6.6e-50 201.1 163 70.6
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 2.1e-48 196.1 132 81.1
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 2.0e-46 189.5 164 68.3
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 1.3e-45 186.8 166 66.9
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 2.9e-45 185.7 160 70.0
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 8.4e-45 184.1 172 64.0
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 8.4e-45 184.1 172 64.0
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.9e-44 183.0 158 66.5
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 3.2e-44 182.2 173 66.5
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.6e-43 179.9 159 68.6
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.7e-42 176.4 175 65.7
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.2e-40 170.2 170 62.4
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 4.7e-40 168.3 163 63.8
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 8.1e-40 167.5 175 61.7
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 7.6e-38 161.0 166 60.2
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 4.2e-36 155.2 170 58.2
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 7.8e-35 151.0 164 54.3
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 7.8e-35 151.0 164 54.3
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.0e-34 150.6 179 55.3
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.3e-34 150.2 102 76.5
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 6.6e-34 147.9 163 55.2
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 6.6e-34 147.9 165 52.7
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 6.6e-34 147.9 163 55.2
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 8.7e-34 147.5 161 53.4
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 8.7e-34 147.5 161 53.4
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 8.7e-34 147.5 164 54.9
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 8.7e-34 147.5 173 49.7
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 8.7e-34 147.5 174 52.3
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.9e-33 146.4 171 52.0
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 3.3e-33 145.6 171 55.6
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 7.3e-33 144.4 163 54.6
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 7.3e-33 144.4 172 54.1
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 7.3e-33 144.4 172 56.4
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 9.6e-33 144.1 172 55.2
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 2.1e-32 142.9 145 60.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 3.6e-32 142.1 167 55.1
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 6.2e-32 141.4 173 54.9
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 8.1e-32 141.0 170 52.9
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 1.1e-31 140.6 175 48.6
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.1e-31 140.6 172 54.7
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.8e-31 139.8 171 51.5
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.8e-31 139.8 171 49.1
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.8e-31 139.8 172 52.9
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 2.4e-31 139.4 164 54.3
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 4.0e-31 138.7 177 52.5
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 5.3e-31 138.3 118 67.8
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 6.9e-31 137.9 177 54.8
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 6.9e-31 137.9 188 50.5
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 6.9e-31 137.9 168 53.0
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 1.2e-30 137.1 170 52.4
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 3.4e-30 135.6 170 54.1
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 3.4e-30 135.6 184 52.2
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 4.5e-30 135.2 163 55.2
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 7.6e-30 134.4 169 52.7
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 7.6e-30 134.4 171 52.6
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 9.9e-30 134.0 177 52.5
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.3e-29 133.7 95 72.6
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 1.7e-29 133.3 170 53.5
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.2e-29 132.9 173 53.8
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.9e-29 131.7 177 51.4
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 4.9e-29 131.7 158 51.3
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 4.9e-29 131.7 158 51.3
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 4.9e-29 131.7 174 50.0
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 8.4e-29 131.0 178 52.2
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.4e-29 131.0 170 52.9
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.4e-29 131.0 167 53.3
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 8.4e-29 131.0 169 54.4
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.9e-28 129.8 170 53.5
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 3.2e-28 129.0 167 49.7
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 5.4e-28 128.3 168 54.2
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.4e-28 128.3 168 54.2
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.2e-27 127.1 175 52.0
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.6e-27 126.7 173 52.0
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 2.7e-27 125.9 91 74.7
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 2.7e-27 125.9 148 55.4
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 3.5e-27 125.6 172 51.7
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.5e-27 125.6 168 53.0
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 1.3e-26 123.6 174 46.0
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 1.8e-26 123.2 159 53.5
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 5.1e-26 121.7 166 53.0
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 6.7e-26 121.3 166 50.0
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 6.7e-26 121.3 162 50.6
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 8.7e-26 120.9 93 71.0
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 2.5e-25 119.4 122 58.2
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 1.3e-24 117.1 137 55.5
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.3e-24 117.1 177 48.6
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 3.7e-24 115.5 148 50.7
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 2.4e-23 112.8 63 85.7
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 6.9e-23 111.3 179 49.2
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 9.0e-23 110.9 91 64.8
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 4.5e-22 108.6 175 47.4
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 2.9e-21 105.9 142 52.8
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 8.4e-21 104.4 142 52.8
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.1e-20 104.0 143 49.0
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.8e-18 96.7 55 83.6
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.9e-17 93.2 108 53.7
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 3.3e-17 92.4 92 59.8
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 9.6e-17 90.9 254 36.2
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 2.8e-16 89.4 132 48.5
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 3.7e-16 89.0 71 63.4
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 3.7e-16 89.0 118 50.8
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 4.8e-16 88.6 71 63.4
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 9.0e-15 84.3 68 60.3
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.2e-14 84.0 70 60.0
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 2.9e-13 79.3 76 55.3
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.9e-12 76.6 103 48.5
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 5.5e-12 75.1 142 43.7
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 6.1e-11 71.6 154 41.6
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 6.1e-11 71.6 45 77.8
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.0e-10 70.9 78 55.1


User provided reference genes

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