Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25084_v3 Cicer arietinum L. HOM05D009500 ORTHO05D010403 1.1e-173 613.2 308 100.0
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 1.8e-99 366.7 302 65.6
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 7.4e-90 334.7 298 59.4
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 5.3e-88 328.6 307 57.0
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 9.7e-82 307.8 296 59.5
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 3.1e-80 302.8 313 55.6
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 5.9e-79 298.5 301 56.5
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 6.1e-76 288.5 301 55.1
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 2.2e-73 280.0 305 54.4
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 3.1e-72 276.2 299 54.2
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 1.4e-61 240.7 299 50.5
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 2.5e-61 240.0 296 49.3
Psat3g003680 Pisum sativum HOM05D009500 ORTHO05D000368 5.7e-58 228.8 308 46.4
Medtr7g116250 Medicago truncatula HOM05D008175 ORTHO05D000368 4.8e-57 225.7 208 61.1
TPR.G6989 Trifolium pratense HOM05D009500 ORTHO05D000368 1.1e-48 198.0 296 44.6
Medtr5g090500 Medicago truncatula HOM05D009500 ORTHO05D000368 2.0e-47 193.7 224 52.2
TPR.G11409 Trifolium pratense HOM05D009500 ORTHO05D000368 1.6e-39 167.5 138 62.3
Medtr1g111630 Medicago truncatula HOM05D009500 ORTHO05D000368 5.5e-37 159.1 297 38.7
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 5.2e-35 152.5 130 61.5
TPR.G4804 Trifolium pratense HOM05D008175 ORTHO05D000368 1.5e-34 151.0 142 54.9
TPR.G40354 Trifolium pratense HOM05D009500 ORTHO05D000368 1.9e-29 134.0 111 59.5
Ca_09527_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 4.3e-29 132.9 283 34.6
Aqoxy5G04185 Aquilegia oxysepala HOM05D000015 ORTHO05D002445 7.0e-24 115.5 301 31.9
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.6e-23 112.8 298 29.5
Medtr7g105510 Medicago truncatula HOM05D008175 ORTHO05D010403 3.0e-22 110.2 267 31.8
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.9e-21 107.5 295 29.8
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 1.2e-20 104.8 294 29.6
TPR.G29294 Trifolium pratense HOM05D008175 ORTHO05D010403 1.6e-20 104.4 90 58.9
TPR.G24323 Trifolium pratense HOM05D008175 ORTHO05D010403 1.1e-19 101.7 218 34.9
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 2.3e-19 100.5 296 30.7
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 4.0e-19 99.8 264 31.8
FAN14G2737 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.0e-18 97.4 246 29.7
Medtr2g064400 Medicago truncatula HOM05D008175 ORTHO05D010403 2.6e-18 97.1 300 27.7
TPR.G39541 Trifolium pratense HOM05D009500 ORTHO05D000368 2.6e-18 97.1 87 60.9
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.4e-18 96.7 292 28.4
TPR.G8431 Trifolium pratense HOM05D009500 ORTHO05D000368 1.7e-17 94.4 86 58.1
Medtr7g092650 Medicago truncatula HOM05D008175 ORTHO05D010403 3.7e-17 93.2 218 32.6
Medtr7g095350 Medicago truncatula HOM05D008175 ORTHO05D010403 3.7e-17 93.2 266 32.0
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 3.7e-17 93.2 309 25.2
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.9e-17 92.8 294 28.6
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.2e-16 90.1 299 29.1
Medtr7g087040 Medicago truncatula HOM05D008175 ORTHO05D010403 3.2e-16 90.1 212 34.9
FvH4_6g44041 Fragaria vesca HOM05D008847 ORTHO05D000368 7.0e-16 89.0 264 29.9
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.0e-16 89.0 295 31.5
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.0e-16 89.0 299 29.1
Psat3g047200 Pisum sativum HOM05D008175 ORTHO05D010403 7.0e-16 89.0 283 29.7
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 9.2e-16 88.6 297 26.9
TPR.G3860 Trifolium pratense HOM05D008175 ORTHO05D010403 9.2e-16 88.6 265 31.3
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-15 88.2 299 28.8
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 1.2e-15 88.2 259 30.9
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 2.1e-15 87.4 294 26.9
Aqoxy1G01400 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 2.7e-15 87.0 275 28.7
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 3.5e-15 86.7 262 29.0
Medtr7g087840 Medicago truncatula HOM05D008175 ORTHO05D010403 3.5e-15 86.7 212 32.5
Psat7g057400 Pisum sativum HOM05D008175 ORTHO05D010403 4.6e-15 86.3 307 27.4
Medtr6g013240 Medicago truncatula HOM05D008175 ORTHO05D010403 6.0e-15 85.9 211 32.2
Medtr6g013380 Medicago truncatula HOM05D008175 ORTHO05D010403 6.0e-15 85.9 211 32.2
FAN05G3797 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.0e-14 85.1 289 27.3
TPR.G20555 Trifolium pratense HOM05D008175 ORTHO05D010403 1.0e-14 85.1 223 30.5
CSS0001211 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.3e-14 84.7 315 27.3
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.3e-14 84.0 293 27.3
TPR.G4066 Trifolium pratense HOM05D008175 ORTHO05D010403 3.0e-14 83.6 274 25.5
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 5.1e-14 82.8 259 28.6
Medtr7g095560 Medicago truncatula HOM05D008175 ORTHO05D010403 5.1e-14 82.8 285 28.4
Medtr3g009910 Medicago truncatula HOM05D008175 ORTHO05D010403 6.6e-14 82.4 234 29.9
FvH4_6g50840 Fragaria vesca HOM05D000576 ORTHO05D000368 8.6e-14 82.0 191 30.4
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.6e-14 82.0 249 28.5
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.5e-13 81.3 315 27.6
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.9e-13 80.9 303 25.1
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.9e-13 80.9 300 27.3
CSS0016406 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.5e-13 80.5 315 27.3
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 5.6e-13 79.3 253 26.9
TPR.G11377 Trifolium pratense HOM05D009500 ORTHO05D000368 5.6e-13 79.3 104 48.1
TAR365G0551 Trochodendron aralioides HOM05D000576 ORTHO05D000368 9.5e-13 78.6 201 31.3
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-12 78.2 211 30.3
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.6e-12 77.8 231 28.1
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.6e-12 77.8 167 31.7
Aqoxy5G02891 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 6.2e-12 75.9 242 28.1
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.4e-11 74.7 166 33.7
Aqoxy5G04063 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.8e-11 74.3 270 27.8
Medtr6g471290 Medicago truncatula HOM05D008175 ORTHO05D010403 1.8e-11 74.3 304 27.0
Aqoxy7G03624 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 6.8e-11 72.4 256 24.6
Medtr7g089610 Medicago truncatula HOM05D008175 ORTHO05D010403 6.8e-11 72.4 272 27.6
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 6.8e-11 72.4 259 27.0
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.9e-11 72.0 294 29.6
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 8.9e-11 72.0 295 25.1
vmacro11253 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 8.9e-11 72.0 194 30.4
Ca_26228_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 1.2e-10 71.6 214 30.8
TPR.G4335 Trifolium pratense HOM05D009500 ORTHO05D000368 1.2e-10 71.6 64 59.4
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 2.0e-10 70.9 252 23.0
FAN14G2415 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.0e-10 70.9 219 28.3
Medtr2g032920 Medicago truncatula HOM05D008175 ORTHO05D010403 2.0e-10 70.9 226 29.6
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 7.5e-10 68.9 258 25.2
Migut.J00569 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.9e-10 68.6 213 27.7
Migut.J00967 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.9e-10 68.6 252 25.8
Medtr7g089620 Medicago truncatula HOM05D008175 ORTHO05D010403 9.9e-10 68.6 296 27.4
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.7e-09 67.8 269 26.4
SGA_v2.0_scaffold70G23622 Striga asiatica HOM05D000576 ORTHO05D000368 3.7e-09 66.6 261 27.2
MBI06_g04290_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 4.9e-09 66.2 235 27.2
Os09g0502600 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D011164 4.9e-09 66.2 171 26.9
COL.COLO4_13869 Corchorus olitorius HOM05D010825 ORTHO05D012667 1.4e-08 64.7 227 26.9
COL.COLO4_08802 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.9e-08 64.3 172 30.2
CiPaw.10G088400 Carya illinoinensis HOM05D000576 ORTHO05D000368 4.1e-08 63.2 251 25.9
MD09G1063900 Malus domestica HOM05D000576 ORTHO05D000368 4.1e-08 63.2 246 27.6
Migut.E00768 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.4e-08 62.8 289 24.6
RcHm_v2.0_Chr2g0167561 Rosa chinensis HOM05D000576 ORTHO05D000368 5.4e-08 62.8 124 33.9
Medtr6g071510 Medicago truncatula HOM05D008175 ORTHO05D010403 7.1e-08 62.4 210 30.0
Os07g0160500 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 7.1e-08 62.4 212 24.1
TPR.G4714 Trifolium pratense HOM05D009500 ORTHO05D000368 7.1e-08 62.4 66 56.1
Cc02_g06350 Coffea canephora HOM05D000576 ORTHO05D000368 9.2e-08 62.0 248 25.0
Migut.H01270 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.2e-08 62.0 213 28.6
Manes.17G000300 Manihot esculenta HOM05D000576 ORTHO05D000368 9.2e-08 62.0 250 25.2
TAR496G0003 Trochodendron aralioides HOM05D000576 ORTHO05D000368 9.2e-08 62.0 270 27.0
FvH4_1g15890 Fragaria vesca HOM05D000576 ORTHO05D000368 1.6e-07 61.2 225 28.9
CiPaw.10G097300 Carya illinoinensis HOM05D000576 ORTHO05D000368 2.1e-07 60.8 199 27.6
MD05G1360100 Malus domestica HOM05D000576 ORTHO05D000368 2.1e-07 60.8 223 26.9
Prupe.7G069200 Prunus persica HOM05D000576 ORTHO05D000368 2.1e-07 60.8 248 28.6
Actinidia20536 Actinidia chinensis HOM05D000576 ORTHO05D000368 2.7e-07 60.5 217 27.6
Os07g0163200 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 3.5e-07 60.1 247 25.1
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.6e-07 59.7 270 26.7
Migut.J00150 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.0e-07 59.3 213 28.2
vmacro18523 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 7.8e-07 58.9 229 27.1
Cfa013470 Carpinus fangiana HOM05D000576 ORTHO05D000368 1.0e-06 58.5 249 26.9
Medtr7g095340 Medicago truncatula HOM05D008175 ORTHO05D010403 1.0e-06 58.5 184 28.3
Thecc.06G198800 Theobroma cacao HOM05D001396 ORTHO05D000493 1.0e-06 58.5 167 31.1
Migut.I00397 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.7e-06 57.8 252 27.4
Medtr7g095390 Medicago truncatula HOM05D008175 ORTHO05D010403 1.7e-06 57.8 137 29.2
QL10p005093 Quercus lobata HOM05D000576 ORTHO05D000368 2.3e-06 57.4 177 28.8
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 3.0e-06 57.0 271 24.4
Migut.G00964 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-06 57.0 183 30.6
Migut.J00168 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-06 57.0 214 25.2
Migut.J00697 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-06 57.0 172 25.6
FAN19G3107 Fragaria x ananassa HOM05D000555 ORTHO05D000646 3.0e-06 57.0 225 28.4
QL04p071108 Quercus lobata HOM05D000576 ORTHO05D000368 3.0e-06 57.0 177 29.4
TPR.G21834 Trifolium pratense HOM05D008175 ORTHO05D010403 3.0e-06 57.0 220 28.2
Gohir.D08G134100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 5.1e-06 56.2 222 23.0
Gorai.004G137200 Gossypium raimondii HOM05D000576 ORTHO05D000368 5.1e-06 56.2 222 23.0
Os06g0161300 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 5.1e-06 56.2 230 24.3
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 5.1e-06 56.2 248 23.8
Aqoxy4G00512 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 6.6e-06 55.8 217 27.2
Os06g0204600 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 6.6e-06 55.8 249 22.5
AUR62016913 Chenopodium quinoa HOM05D000576 ORTHO05D008290 8.6e-06 55.5 196 30.1
Migut.J00889 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.6e-06 55.5 159 25.8
MBI18_g07609_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 8.6e-06 55.5 207 27.1
Psat3g004120 Pisum sativum HOM05D009500 ORTHO05D000368 8.6e-06 55.5 131 31.3


User provided reference genes

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