Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25045_v3 Cicer arietinum L. HOM05D008997 ORTHO05D011051 1.9e-69 265.8 136 100.0
Psat2g145480 Pisum sativum HOM05D008997 ORTHO05D011051 8.7e-59 230.3 126 93.7
Medtr5g025520 Medicago truncatula HOM05D008997 ORTHO05D011051 4.3e-58 228.0 132 89.4
Phvul.002G121500 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 5.4e-53 211.1 128 82.0
Phvul.004G038900 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 1.2e-52 209.9 129 82.2
VMungo0464G1626 Vigna mungo HOM05D008997 ORTHO05D011051 3.5e-52 208.4 130 83.1
Lalb_Chr09g0324991 Lupinus albus HOM05D008997 ORTHO05D011051 1.3e-51 206.5 130 80.0
Lalb_Chr05g0215081 Lupinus albus HOM05D008997 ORTHO05D011051 3.0e-51 205.3 130 80.0
Lj2g0013331 Lotus japonicus HOM05D008997 ORTHO05D011051 1.1e-50 203.4 141 77.3
Glyma.11G090500 Glycine max HOM05D008997 ORTHO05D011051 2.8e-49 198.7 130 78.5
TPR.G8981 Trifolium pratense HOM05D008997 ORTHO05D011051 9.0e-48 193.7 137 73.7
arahy.Tifrunner.gnm1.ann1.G1G4QR Arachis hypogaea HOM05D008997 ORTHO05D011051 2.1e-36 156.0 160 56.9
arahy.Tifrunner.gnm1.ann1.QSM4Y5 Arachis hypogaea HOM05D008997 ORTHO05D011051 2.1e-36 156.0 160 56.9
VMungo1215G3078 Vigna mungo HOM05D008997 ORTHO05D011051 1.4e-24 116.7 129 55.0
CiPaw.11G075100 Carya illinoinensis HOM05D008997 ORTHO05D011051 1.8e-24 116.3 136 49.3
QL12p004181 Quercus lobata HOM05D008997 ORTHO05D011051 1.8e-19 99.8 141 44.0
Prupe.1G353500 Prunus persica HOM05D008997 ORTHO05D011051 2.3e-19 99.4 135 45.9
MD08G1001500 Malus domestica HOM05D008997 ORTHO05D011051 2.2e-17 92.8 129 44.2
MD15G1000800 Malus domestica HOM05D008997 ORTHO05D011051 2.2e-17 92.8 116 46.6
RcHm_v2.0_Chr6g0304331 Rosa chinensis HOM05D008997 ORTHO05D011051 6.3e-17 91.3 131 45.0
Sed0009134 Sechium edule HOM05D008997 ORTHO05D011051 4.1e-16 88.6 81 50.6
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.4e-15 85.5 140 39.3
FvH4_2g37377 Fragaria vesca HOM05D008997 ORTHO05D011051 4.5e-15 85.1 136 41.2
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.5e-15 85.1 129 44.2
FAN21G1189 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.0e-14 84.0 136 41.2
FAN21G1803 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.0e-14 84.0 136 41.2
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.2e-14 82.8 124 41.1
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.2e-14 82.8 136 41.2
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.9e-14 82.4 136 40.4
PGR031G0389 Punica granatum HOM05D008997 ORTHO05D011051 1.4e-13 80.1 97 43.3
Atru.chr8.2628 Acer truncatum HOM05D008997 ORTHO05D011051 7.2e-13 77.8 93 46.2
Ciclev10013116m.g Citrus clementina HOM05D008997 ORTHO05D011051 7.2e-13 77.8 70 54.3
FAN21G1848 Fragaria x ananassa HOM05D008997 ORTHO05D011051 2.7e-12 75.9 151 37.7
Eucgr.D02561 Eucalyptus grandis HOM05D008997 ORTHO05D011051 1.4e-11 73.6 85 45.9
FAN27G1108 Fragaria x ananassa HOM05D008997 ORTHO05D011051 3.9e-11 72.0 151 36.4
COL.COLO4_11281 Corchorus olitorius HOM05D008997 ORTHO05D011051 6.7e-11 71.2 101 39.6
Thecc.03G319000 Theobroma cacao HOM05D008997 ORTHO05D011051 3.3e-10 68.9 80 43.8
Sabra05G0064400 Salix brachista HOM05D008997 ORTHO05D011051 2.8e-09 65.9 110 36.4
Manes.10G091000 Manihot esculenta HOM05D008997 ORTHO05D011051 2.4e-08 62.8 71 42.3
Potri.005G078400 Populus trichocarpa HOM05D008997 ORTHO05D011051 2.4e-08 62.8 110 35.5
SGA_v2.0_scaffold98G29374 Striga asiatica HOM05D000827 ORTHO05D001318 9.1e-08 60.8 77 37.7
THA.LOC104798526 Tarenaya hassleriana HOM05D013199 ORTHO05D015353 1.2e-07 60.5 66 40.9
Glyma.01G154200 Glycine max HOM05D000827 ORTHO05D001318 2.0e-07 59.7 77 39.0
Glyma.11G090400 Glycine max HOM05D000827 ORTHO05D001318 3.4e-07 58.9 77 37.7
Peaxi162Scf00907g00019 Petunia axillaris HOM05D000827 ORTHO05D001318 4.5e-07 58.5 77 37.7
CSS0043160 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 7.7e-07 57.8 104 29.8
Ciclev10033040m.g Citrus clementina HOM05D000827 ORTHO05D001318 7.7e-07 57.8 81 34.6
Cc08_g05790 Coffea canephora HOM05D000827 ORTHO05D001318 1.3e-06 57.0 101 31.7
Thhalv10017454m.g Eutrema salsugineum HOM05D000827 ORTHO05D001318 1.3e-06 57.0 83 36.1
Potri.009G092200 Populus trichocarpa HOM05D000827 ORTHO05D001318 1.3e-06 57.0 77 35.1
Haze_08436 Corylus avellana HOM05D000827 ORTHO05D001318 1.7e-06 56.6 121 24.8
Sabra09G0070900 Salix brachista HOM05D000827 ORTHO05D001318 1.7e-06 56.6 77 35.1
Lj2g0023362 Lotus japonicus HOM05D000827 ORTHO05D001318 2.2e-06 56.2 77 36.4
Sabra16G0186400 Salix brachista HOM05D000827 ORTHO05D001318 2.2e-06 56.2 74 35.1
Potri.001G297400 Populus trichocarpa HOM05D000827 ORTHO05D001318 2.9e-06 55.8 95 29.5
TAR629G0081 Trochodendron aralioides HOM05D000827 ORTHO05D001318 2.9e-06 55.8 82 31.7
GSVIVG01036871001 Vitis vinifera HOM05D000827 ORTHO05D001318 2.9e-06 55.8 80 38.8
ClCG06G000610 Citrullus lanatus HOM05D000827 ORTHO05D001318 3.8e-06 55.5 97 33.0
vmacro00092 Vaccinium macrocarpon HOM05D000827 ORTHO05D001318 3.8e-06 55.5 109 33.0
Actinidia05830 Actinidia chinensis HOM05D000827 ORTHO05D001318 5.0e-06 55.1 63 38.1
AL4G31640 Arabidopsis lyrata HOM05D000827 ORTHO05D001318 5.0e-06 55.1 83 34.9
AT1G31760 Arabidopsis thaliana HOM05D000827 ORTHO05D001318 5.0e-06 55.1 90 32.2
CANSAT80G2464 Cannabis sativa HOM05D000827 ORTHO05D001318 5.0e-06 55.1 78 33.3
MELO3C018505.2 Cucumis melo HOM05D000827 ORTHO05D001318 5.0e-06 55.1 77 36.4
Gohir.A08G149400 Gossypium hirsutum HOM05D000827 ORTHO05D001318 5.0e-06 55.1 79 34.2
Thecc.03G319100 Theobroma cacao HOM05D000827 ORTHO05D001318 5.0e-06 55.1 92 31.5
TWI34G0874 Tripterygium wilfordii HOM05D000827 ORTHO05D001318 5.0e-06 55.1 89 37.1
BcaB07g32822 Brassica carinata HOM05D000827 ORTHO05D001318 6.5e-06 54.7 102 31.4
Carub.0001s3006 Capsella rubella HOM05D000827 ORTHO05D001318 8.5e-06 54.3 92 29.3
ECA233G5913 Erigeron canadensis HOM05D000827 ORTHO05D001318 8.5e-06 54.3 104 31.7


User provided reference genes

Program Settings