Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 1.6e-255 885.6 434 100.0
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 9.3e-232 806.6 434 90.6
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 3.7e-220 768.1 434 85.9
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 3.4e-218 761.5 436 86.7
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 2.7e-207 725.3 426 83.1
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 2.6e-197 692.2 387 85.0
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 1.8e-187 659.4 427 78.2
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 4.2e-184 648.3 445 72.4
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 4.2e-184 648.3 448 71.7
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 2.6e-181 639.0 418 74.9
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 4.6e-170 601.7 390 71.0
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 1.0e-169 600.5 321 88.5
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 1.7e-169 599.7 438 66.4
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 3.9e-169 598.6 437 66.4
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 1.1e-168 597.0 429 66.4
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 4.3e-168 595.1 436 66.3
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 1.2e-167 593.6 441 65.8
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 2.3e-166 589.3 445 65.4
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 3.1e-166 589.0 435 65.5
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 5.2e-166 588.2 435 64.6
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 6.8e-166 587.8 435 66.0
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 8.9e-166 587.4 444 63.7
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 7.5e-165 584.3 438 66.4
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 3.2e-163 578.9 439 64.2
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 7.0e-163 577.8 434 64.7
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 7.0e-163 577.8 439 63.8
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 1.6e-162 576.6 439 64.0
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 4.6e-162 575.1 434 65.0
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 6.0e-162 574.7 442 63.3
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 7.8e-162 574.3 434 63.4
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.3e-161 573.5 433 63.5
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 1.7e-161 573.2 439 65.4
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 1.2e-159 567.0 430 64.2
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 4.7e-159 565.1 429 63.2
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 6.2e-159 564.7 435 62.3
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 6.2e-159 564.7 439 64.9
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 4.0e-158 562.0 435 63.7
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 4.0e-158 562.0 435 61.8
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.5e-157 560.1 393 67.7
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 2.6e-157 559.3 435 63.7
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 2.6e-157 559.3 439 64.2
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 5.8e-157 558.1 436 61.9
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 7.5e-157 557.8 425 63.1
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 7.5e-157 557.8 428 65.0
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 2.4e-155 552.7 440 61.4
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 3.2e-155 552.4 435 63.4
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 7.1e-155 551.2 439 61.7
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 1.2e-154 550.4 437 62.5
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.6e-154 550.1 450 60.7
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 2.7e-154 549.3 415 64.3
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 7.8e-154 547.7 442 60.9
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 6.6e-153 544.7 436 61.9
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 8.6e-153 544.3 435 61.1
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 3.3e-152 542.3 389 64.5
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 1.6e-151 540.0 444 60.1
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 2.1e-151 539.7 435 60.7
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 3.6e-151 538.9 435 60.2
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 1.4e-150 537.0 438 59.1
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 8.9e-150 534.3 442 59.7
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.5e-149 533.5 389 64.3
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 2.6e-149 532.7 437 59.5
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 2.9e-148 529.3 417 59.5
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 4.2e-147 525.4 463 56.8
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 7.1e-147 524.6 438 58.9
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 9.2e-147 524.2 426 60.1
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 2.1e-146 523.1 426 60.1
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 2.1e-146 523.1 427 60.7
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 2.7e-146 522.7 436 60.8
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 6.0e-146 521.5 428 60.0
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 7.8e-146 521.2 443 56.7
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 7.8e-146 521.2 427 60.4
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.0e-145 520.8 436 58.5
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 3.9e-145 518.8 438 61.9
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 5.1e-145 518.5 444 57.9
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 8.7e-145 517.7 364 63.7
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 4.3e-144 515.4 440 56.8
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 7.3e-144 514.6 426 60.3
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 1.3e-143 513.8 389 63.8
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 1.6e-143 513.5 372 62.9
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 5.3e-142 508.4 354 63.6
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 5.8e-141 505.0 424 56.4
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 1.7e-140 503.4 473 55.0
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 1.4e-139 500.4 354 65.0
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 9.3e-139 497.7 400 59.5
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 1.6e-138 496.9 427 56.9
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 1.6e-138 496.9 477 52.8
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 2.4e-134 483.0 321 67.9
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 2.9e-132 476.1 531 48.2
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 8.4e-132 474.6 393 58.3
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 6.0e-130 468.4 436 57.8
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 7.9e-130 468.0 364 61.3
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.8e-127 459.5 431 52.4
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 7.6e-125 451.4 363 58.4
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 1.0e-124 451.1 391 56.8
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 4.6e-122 442.2 351 62.1
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 6.1e-106 388.7 253 71.1
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 6.3e-103 378.6 368 50.0
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 5.3e-102 375.6 331 55.6
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.4e-89 334.3 284 59.9
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 3.0e-89 333.2 410 43.2
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 6.3e-87 325.5 340 46.8
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 5.0e-84 315.8 337 47.8
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.9e-83 313.9 328 48.2
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 7.5e-80 302.0 399 40.6
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 9.1e-78 295.0 234 62.4
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.0e-72 277.3 433 39.0
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 6.1e-66 255.8 380 35.3
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 2.8e-50 203.8 179 55.3
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 3.7e-39 166.8 140 55.7
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 1.2e-34 151.8 118 59.3
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 2.9e-31 140.6 134 56.7
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 7.6e-24 115.9 60 83.3
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.3e-12 77.8 50 62.0


User provided reference genes

Program Settings