Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25012_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 2.2e-196 688.7 334 100.0
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 1.7e-63 247.3 214 58.9
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 1.3e-60 237.7 164 68.3
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 7.3e-59 231.9 162 67.3
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 3.1e-57 226.5 165 67.3
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 2.1e-53 213.8 164 63.4
Manes.11G055432 Manihot esculenta HOM05D006716 ORTHO05D008396 1.1e-35 154.8 181 46.4
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 5.6e-35 152.5 200 42.5
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 9.6e-35 151.8 179 45.3
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 2.1e-34 150.6 194 44.3
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 4.8e-34 149.4 180 43.9
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 1.1e-33 148.3 181 44.8
vmacro15746 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.4e-33 147.9 195 42.6
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 4.0e-33 146.4 169 44.4
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 2.0e-32 144.1 190 41.1
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 5.8e-32 142.5 226 38.5
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 7.6e-32 142.1 200 43.0
Lj9A35T20 Lonicera japonica HOM05D006716 ORTHO05D008396 9.9e-32 141.7 186 40.3
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 2.9e-31 140.2 168 45.2
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 3.8e-31 139.8 176 46.6
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.9e-30 137.5 166 42.8
CAN.G497.65 Capsicum annuum HOM05D006716 ORTHO05D008396 1.9e-30 137.5 169 42.0
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 4.2e-30 136.3 168 44.0
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 5.5e-30 136.0 95 71.6
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 9.3e-30 135.2 169 43.2
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.6e-29 134.4 196 39.3
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 1.6e-29 134.4 248 34.7
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 3.5e-29 133.3 190 42.6
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 8.7e-28 128.6 189 37.6
vmacro15747 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 8.7e-28 128.6 210 38.1
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 1.1e-27 128.3 162 43.8
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 1.9e-27 127.5 164 43.9
vmacro12389 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 9.6e-27 125.2 185 39.5
vmacro15749 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.3e-26 124.8 190 39.5
TPR.G29566 Trifolium pratense HOM05D006716 ORTHO05D008396 2.4e-25 120.6 196 36.2
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 1.2e-24 118.2 179 39.7
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 2.0e-24 117.5 123 48.8
Lj9A35T22 Lonicera japonica HOM05D006716 ORTHO05D008396 1.0e-23 115.2 201 37.8
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 1.7e-23 114.4 174 37.4
vmacro12393 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.9e-23 113.6 184 37.0
vmacro12392 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 3.8e-23 113.2 167 37.7
Ca_25001_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.1e-22 111.7 102 64.7
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 1.9e-22 110.9 170 39.4
SGA_v2.0_scaffold57G20300 Striga asiatica HOM05D006716 ORTHO05D008396 5.5e-22 109.4 162 37.0
Rhsim07G0026700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.1e-21 107.5 212 33.0
PSO478G4756 Papaver somniferum HOM05D006716 ORTHO05D008396 1.3e-20 104.8 159 37.7
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 3.0e-20 103.6 167 38.3
Duzib114G0950 Durio zibethinus HOM05D006716 ORTHO05D008396 3.9e-20 103.2 188 38.8
Duzib114G0774 Durio zibethinus HOM05D006716 ORTHO05D008396 5.1e-20 102.8 189 37.6
Peaxi162Scf01072g00410 Petunia axillaris HOM05D006716 ORTHO05D008396 5.1e-20 102.8 198 32.3
Potri.018G001301 Populus trichocarpa HOM05D006716 ORTHO05D008396 2.5e-19 100.5 165 37.0
SGA_v2.0_scaffold57G20303 Striga asiatica HOM05D006716 ORTHO05D008396 2.5e-19 100.5 175 37.7
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 3.3e-19 100.1 177 35.6
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 1.3e-18 98.2 243 31.3
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 1.6e-18 97.8 173 36.4
PSO017G6103 Papaver somniferum HOM05D006716 ORTHO05D008396 3.7e-18 96.7 154 36.4
Manes.04G051500 Manihot esculenta HOM05D006716 ORTHO05D008396 4.8e-18 96.3 135 39.3
DCAR_001904 Daucus carota HOM05D006716 ORTHO05D008396 1.4e-17 94.7 164 38.4
Duzib114G0358 Durio zibethinus HOM05D006716 ORTHO05D008396 3.1e-17 93.6 171 36.3
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 4.5e-16 89.7 122 40.2
Peaxi162Scf00226g00717 Petunia axillaris HOM05D006716 ORTHO05D008396 1.7e-15 87.8 168 36.3
PSO478G1238 Papaver somniferum HOM05D006716 ORTHO05D008396 2.2e-15 87.4 157 36.3
Duzib114G0505 Durio zibethinus HOM05D006716 ORTHO05D008396 5.0e-15 86.3 181 33.7
Os03g0608800 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 6.5e-15 85.9 186 30.1
Peaxi162Scf00226g00715 Petunia axillaris HOM05D006716 ORTHO05D008396 1.1e-14 85.1 191 30.4
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.1e-14 85.1 175 35.4
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.0e-12 78.6 176 35.2
Ca_25017_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 6.7e-12 75.9 49 73.5
TPR.G26874 Trifolium pratense HOM05D006716 ORTHO05D008396 1.5e-11 74.7 132 34.8
Ah.08g210040 Amaranthus hybridus HOM05D006716 ORTHO05D008396 5.7e-11 72.8 194 30.4
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 9.7e-11 72.0 118 33.1
Os09g0436700 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 8.2e-10 68.9 156 28.8
Ca_25014_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.4e-09 68.2 42 73.8
DCAR_001924 Daucus carota HOM05D006716 ORTHO05D008396 9.1e-09 65.5 154 27.9
Os09g0436400 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 1.2e-08 65.1 154 27.9
Hma1.2p1_0003F.1_g003570 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.5e-08 64.7 191 28.8
DCAR_021339 Daucus carota HOM05D006716 ORTHO05D008396 3.4e-08 63.5 126 34.1
Os01g0278600 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 3.4e-08 63.5 75 41.3
CAN.G497.69 Capsicum annuum HOM05D003495 ORTHO05D004159 7.7e-08 62.4 50 58.0
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.0e-07 62.0 96 33.3
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.0e-07 62.0 96 33.3
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.2e-07 60.8 94 38.3
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 2.2e-07 60.8 109 36.7
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 3.8e-07 60.1 94 37.2
CAN.G497.57 Capsicum annuum HOM05D006716 ORTHO05D008396 5.0e-07 59.7 89 33.7
unitig_699.g19247 Utricularia gibba HOM05D005214 ORTHO05D005861 4.2e-06 56.6 185 28.6
Os07g0665700 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 5.5e-06 56.2 86 40.7


User provided reference genes

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