Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25001_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.1e-50 203.0 99 100.0
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 4.5e-33 144.4 84 83.3
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 2.1e-30 135.6 84 75.0
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 4.7e-30 134.4 84 75.0
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 2.4e-26 122.1 83 68.7
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 5.0e-24 114.4 80 65.0
Ca_25012_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.1e-23 113.2 102 64.7
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 3.1e-21 105.1 75 66.7
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 1.6e-14 82.8 80 47.5
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 4.7e-14 81.3 80 46.2
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 1.1e-13 80.1 80 43.8
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 4.0e-13 78.2 80 42.5
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 4.0e-13 78.2 80 47.5
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 2.0e-12 75.9 80 41.2
CAN.G497.65 Capsicum annuum HOM05D006716 ORTHO05D008396 3.4e-12 75.1 76 43.4
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 2.2e-11 72.4 78 43.6
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 2.2e-11 72.4 75 45.3
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 2.2e-11 72.4 79 40.5
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 1.4e-10 69.7 87 42.5
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 1.9e-10 69.3 79 39.2
CAN.G497.57 Capsicum annuum HOM05D006716 ORTHO05D008396 2.4e-10 68.9 66 45.5
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 3.2e-10 68.6 80 40.0
vmacro15746 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 4.1e-10 68.2 78 44.9
Manes.11G055432 Manihot esculenta HOM05D006716 ORTHO05D008396 5.4e-10 67.8 87 41.4
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 5.4e-10 67.8 78 41.0
Hma1.2p1_0003F.1_g003570 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 7.1e-10 67.4 85 38.8
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 7.1e-10 67.4 72 41.7
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 9.2e-10 67.0 83 42.2
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 1.2e-09 66.6 77 40.3
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.2e-09 66.6 85 38.8
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.6e-09 66.2 83 41.0
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 2.1e-09 65.9 84 39.3
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 4.6e-09 64.7 79 43.0
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 1.0e-08 63.5 72 41.7
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 1.7e-08 62.8 79 36.7
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 5.1e-08 61.2 58 44.8
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 6.6e-08 60.8 78 39.7
Manes.04G051500 Manihot esculenta HOM05D006716 ORTHO05D008396 6.6e-08 60.8 87 39.1
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.5e-07 59.7 65 40.0
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 1.9e-07 59.3 82 35.4
Lj9A35T20 Lonicera japonica HOM05D006716 ORTHO05D008396 3.3e-07 58.5 76 31.6
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 3.3e-07 58.5 71 40.8
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 5.6e-07 57.8 67 43.3
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.6e-07 57.8 59 40.7
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.6e-07 57.8 59 40.7
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 7.3e-07 57.4 78 35.9
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 7.3e-07 57.4 78 35.9
Rhsim01G0093600 Rhododendron simsii HOM05D006716 ORTHO05D008396 7.3e-07 57.4 59 40.7
CSS0009954 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 9.5e-07 57.0 82 34.1
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.2e-06 56.6 78 38.5
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 1.2e-06 56.6 75 37.3
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 1.6e-06 56.2 74 40.5
vmacro15747 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.1e-06 55.8 77 39.0
EL10Ac9g20945 Beta vulgaris HOM05D006716 ORTHO05D008396 2.8e-06 55.5 72 38.9
Potri.018G001301 Populus trichocarpa HOM05D006716 ORTHO05D008396 2.8e-06 55.5 82 36.6
Rhsim07G0026700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.8e-06 55.5 57 42.1
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 3.6e-06 55.1 84 33.3
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 3.6e-06 55.1 74 36.5
Ca_25014_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 4.7e-06 54.7 42 69.0
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 6.2e-06 54.3 72 34.7


User provided reference genes

Program Settings