Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 3.4e-169 598.2 297 100.0
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 9.6e-95 350.9 335 58.2
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 1.1e-87 327.4 220 73.6
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 1.5e-87 327.0 334 55.1
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 1.9e-79 300.1 345 49.3
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 5.8e-76 288.5 300 53.3
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 2.2e-51 206.8 335 36.4
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.8e-45 187.2 216 45.4
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.8e-45 187.2 262 42.4
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.8e-45 187.2 216 45.4
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 5.9e-44 182.2 322 37.0
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 3.2e-42 176.4 343 35.6
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 5.5e-42 175.6 261 37.9
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 2.7e-41 173.3 327 33.6
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 4.7e-41 172.6 332 32.8
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 5.2e-40 169.1 327 32.7
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 1.2e-39 167.9 357 31.4
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 9.1e-37 158.3 214 40.7
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 3.5e-36 156.4 283 33.9
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 3.2e-34 149.8 286 32.5
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 5.5e-34 149.1 225 36.9
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 7.2e-34 148.7 215 41.4
CSS0009954 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 9.4e-34 148.3 270 35.2
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 2.1e-33 147.1 225 36.9
Ca_25001_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.8e-32 144.1 84 83.3
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.0e-31 140.6 316 32.6
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 3.4e-31 139.8 287 33.4
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 5.7e-31 139.0 222 40.1
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 3.7e-30 136.3 292 30.1
Ca_25012_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 3.7e-30 136.3 95 71.6
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 4.1e-29 132.9 332 26.8
TPR.G12759 Trifolium pratense HOM05D006716 ORTHO05D008396 1.6e-28 131.0 231 40.3
CAN.G497.65 Capsicum annuum HOM05D006716 ORTHO05D008396 2.0e-28 130.6 291 31.3
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 2.0e-28 130.6 285 31.9
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 5.9e-28 129.0 293 32.1
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 1.7e-27 127.5 299 29.1
Lj9A35T20 Lonicera japonica HOM05D006716 ORTHO05D008396 2.9e-27 126.7 278 29.9
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 6.6e-27 125.6 338 29.6
Duzib114G0505 Durio zibethinus HOM05D006716 ORTHO05D008396 8.6e-27 125.2 267 33.0
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.5e-26 124.4 179 38.5
CAN.G497.57 Capsicum annuum HOM05D006716 ORTHO05D008396 1.9e-26 124.0 150 40.7
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 4.2e-26 122.9 176 39.8
EL10Ac9g20945 Beta vulgaris HOM05D006716 ORTHO05D008396 7.2e-26 122.1 176 40.9
DCAR_001902 Daucus carota HOM05D006716 ORTHO05D008396 2.1e-25 120.6 184 41.3
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 3.6e-25 119.8 263 31.2
Hma1.2p1_0003F.1_g003570 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 4.7e-25 119.4 178 38.2
vmacro12393 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 4.7e-25 119.4 286 30.4
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 8.0e-25 118.6 334 28.7
vmacro12389 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.0e-24 118.2 283 30.7
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 2.3e-24 117.1 299 28.4
Manes.11G055432 Manihot esculenta HOM05D006716 ORTHO05D008396 2.3e-24 117.1 225 32.0
Peaxi162Scf00226g00715 Petunia axillaris HOM05D006716 ORTHO05D008396 2.3e-24 117.1 315 28.9
vmacro15749 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 4.0e-24 116.3 191 37.7
Rhsim01G0093700 Rhododendron simsii HOM05D000991 ORTHO05D008396 8.9e-24 115.2 217 32.7
SGA_v2.0_scaffold57G20303 Striga asiatica HOM05D006716 ORTHO05D008396 1.2e-23 114.8 201 36.8
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.5e-23 114.4 279 31.2
vmacro15746 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.5e-23 114.4 232 34.1
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.0e-23 114.0 198 34.3
DCAR_001924 Daucus carota HOM05D006716 ORTHO05D008396 2.6e-23 113.6 179 38.0
Duzib114G0774 Durio zibethinus HOM05D006716 ORTHO05D008396 1.3e-22 111.3 276 30.8
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.7e-22 110.9 287 29.6
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.7e-22 110.9 287 29.6
Rhsim01G0093600 Rhododendron simsii HOM05D006716 ORTHO05D008396 4.9e-22 109.4 227 31.7
Ah.10g035280 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.0e-20 104.0 122 47.5
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 2.7e-20 103.6 286 28.7
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 4.5e-20 102.8 209 29.7
TPR.G29566 Trifolium pratense HOM05D006716 ORTHO05D008396 5.9e-20 102.4 202 34.7
Psat1g146440 Pisum sativum HOM05D006716 ORTHO05D008396 7.8e-20 102.1 91 57.1
Lj9A35T22 Lonicera japonica HOM05D006716 ORTHO05D008396 1.7e-19 100.9 303 27.7
Ah.10g035200 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.3e-19 100.5 122 46.7
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 2.9e-19 100.1 188 36.2
Duzib114G0950 Durio zibethinus HOM05D006716 ORTHO05D008396 5.0e-19 99.4 179 37.4
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 5.0e-19 99.4 302 30.5
vmacro15747 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.1e-18 98.2 190 35.3
SGA_v2.0_scaffold237G43860 Striga asiatica HOM05D006716 ORTHO05D008396 2.5e-18 97.1 256 27.0
Ca_25017_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 4.3e-18 96.3 87 59.8
Potri.018G001301 Populus trichocarpa HOM05D006716 ORTHO05D008396 2.1e-17 94.0 295 27.1
Manes.04G051500 Manihot esculenta HOM05D006716 ORTHO05D008396 6.1e-17 92.4 106 44.3
vmacro12392 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 8.0e-17 92.0 249 24.9
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 6.8e-16 89.0 331 25.4
SGA_v2.0_scaffold57G20300 Striga asiatica HOM05D006716 ORTHO05D008396 7.5e-15 85.5 302 26.5
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 6.4e-14 82.4 310 25.2
Duzib114G0358 Durio zibethinus HOM05D006716 ORTHO05D008396 6.4e-14 82.4 293 25.3
DCAR_010103 Daucus carota HOM05D006716 ORTHO05D008396 1.1e-13 81.6 106 50.0
PSO478G1238 Papaver somniferum HOM05D006716 ORTHO05D008396 5.4e-13 79.3 287 26.5
Peaxi162Scf00226g00717 Petunia axillaris HOM05D006716 ORTHO05D008396 7.0e-13 79.0 136 37.5
Rhsim07G0026700 Rhododendron simsii HOM05D006716 ORTHO05D008396 2.0e-12 77.4 179 29.6
DCAR_001904 Daucus carota HOM05D006716 ORTHO05D008396 1.7e-11 74.3 206 25.2
Os03g0608800 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 1.5e-10 71.2 179 27.9
CAN.G679.10 Capsicum annuum HOM05D001437 ORTHO05D001297 4.3e-10 69.7 177 29.9
Peaxi162Scf01072g00410 Petunia axillaris HOM05D006716 ORTHO05D008396 9.5e-10 68.6 252 21.4
DCAR_002649 Daucus carota HOM05D006417 ORTHO05D008113 1.2e-09 68.2 223 32.7
DCAR_001166 Daucus carota HOM05D006716 ORTHO05D008396 2.8e-09 67.0 93 48.4
PSO478G4756 Papaver somniferum HOM05D006716 ORTHO05D008396 1.1e-08 65.1 169 30.8
Ca_25016_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.8e-08 64.3 86 47.7
Os07g0665700 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 4.0e-08 63.2 94 37.2
Os07g0665300 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 1.2e-07 61.6 106 34.9
Ca_25014_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 2.6e-07 60.5 42 69.0
Os09g0436400 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 5.8e-07 59.3 170 29.4
TPR.G26874 Trifolium pratense HOM05D006716 ORTHO05D008396 1.7e-06 57.8 155 34.2
Os03g0109900 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D030339 3.7e-06 56.6 147 29.3
Os09g0436700 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 4.9e-06 56.2 175 29.1
Psat1g146400 Pisum sativum HOM05D006716 ORTHO05D008396 6.4e-06 55.8 44 56.8


User provided reference genes

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