Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 5.1e-105 384.4 193 100.0
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 2.5e-96 355.5 193 92.7
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 5.3e-94 347.8 193 90.2
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 1.8e-89 332.8 193 85.0
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 4.3e-88 328.2 193 84.5
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 4.8e-87 324.7 193 83.9
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 2.2e-84 315.8 193 81.9
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.1e-80 303.5 193 79.3
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 1.9e-80 302.8 193 77.7
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 1.9e-80 302.8 177 86.4
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 1.9e-80 302.8 193 75.6
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 7.4e-80 300.8 191 78.0
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 9.7e-80 300.4 193 77.2
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 1.3e-79 300.1 192 77.1
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 1.6e-79 299.7 193 77.2
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 4.8e-79 298.1 193 77.7
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 1.1e-78 297.0 190 76.8
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 1.1e-78 297.0 192 76.6
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 1.8e-78 296.2 213 71.4
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 6.9e-78 294.3 183 77.6
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 9.0e-78 293.9 193 72.5
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 3.4e-77 292.0 192 74.5
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 5.9e-77 291.2 193 74.1
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 7.7e-77 290.8 189 73.5
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 1.0e-76 290.4 193 72.0
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.3e-76 290.0 192 77.1
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 5.0e-76 288.1 193 71.5
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 6.5e-76 287.7 189 73.5
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 6.5e-76 287.7 185 77.3
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 8.5e-76 287.3 193 74.6
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 1.1e-75 287.0 188 74.5
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 1.9e-75 286.2 192 74.0
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.5e-75 285.8 189 72.5
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 2.5e-75 285.8 193 75.1
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 2.5e-75 285.8 153 92.2
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.5e-75 285.8 191 75.4
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 7.2e-75 284.3 190 74.2
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 9.4e-75 283.9 190 74.7
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.2e-74 283.5 194 71.6
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 1.2e-74 283.5 191 73.8
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 2.1e-74 282.7 191 70.2
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 6.1e-74 281.2 191 72.8
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 6.1e-74 281.2 191 69.6
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 1.8e-73 279.6 193 72.0
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 2.3e-73 279.3 166 81.3
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 2.3e-73 279.3 166 81.3
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.3e-73 279.3 190 73.7
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 3.0e-73 278.9 189 71.4
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 4.3e-72 275.0 235 62.6
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 3.7e-71 271.9 190 73.7
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 4.8e-71 271.6 186 73.7
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 8.2e-71 270.8 181 71.8
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 8.2e-71 270.8 190 70.5
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 1.8e-70 269.6 191 67.5
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 6.9e-70 267.7 185 67.0
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 1.2e-69 266.9 190 67.9
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.5e-69 266.5 191 64.4
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 1.5e-69 266.5 184 70.7
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 5.9e-69 264.6 193 68.4
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.0e-68 263.8 185 66.5
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.7e-68 263.1 193 66.3
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 6.5e-68 261.2 181 69.1
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.1e-67 260.4 189 67.2
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 1.4e-67 260.0 189 64.0
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 5.5e-67 258.1 184 69.0
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 5.5e-67 258.1 191 65.4
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 2.7e-66 255.8 177 71.8
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 2.7e-66 255.8 153 82.4
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 1.4e-65 253.4 167 71.9
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 3.9e-65 251.9 187 66.3
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 5.1e-65 251.5 230 60.4
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 8.8e-65 250.8 162 76.5
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 1.7e-63 246.5 175 66.9
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 5.9e-61 238.0 209 60.3
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 1.7e-60 236.5 153 72.5
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 2.9e-60 235.7 170 67.6
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.5e-59 233.4 169 65.1
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 7.4e-56 221.1 138 77.5
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 1.3e-55 220.3 138 77.5
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 2.2e-47 193.0 118 78.0
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.8e-47 192.6 153 66.0
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 3.7e-47 192.2 211 52.6
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 3.1e-46 189.1 119 77.3
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 3.8e-44 182.2 126 68.3
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 8.5e-44 181.0 109 81.7
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 7.2e-43 177.9 208 51.4
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 2.7e-37 159.5 140 63.6
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.2e-34 150.6 103 70.9
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 8.0e-34 147.9 113 69.0
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 7.5e-32 141.4 90 77.8
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 8.3e-31 137.9 133 58.6
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 5.4e-30 135.2 82 78.0
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 3.5e-29 132.5 197 45.2
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 8.6e-28 127.9 70 85.7
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 8.9e-25 117.9 76 76.3
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 2.2e-23 113.2 73 74.0
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 5.4e-22 108.6 192 37.5
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.2e-21 107.5 183 33.9
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 1.0e-20 104.4 183 35.0
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 3.3e-19 99.4 60 78.3
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 3.3e-19 99.4 130 37.7
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 5.6e-19 98.6 183 33.3
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 6.2e-18 95.1 166 39.8
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 8.1e-18 94.7 60 80.0
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 5.8e-16 88.6 128 43.0
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 9.8e-16 87.8 74 59.5
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 1.1e-14 84.3 60 63.3
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 1.9e-11 73.6 171 31.6
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 2.0e-08 63.5 59 52.5
Migut.L00776 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.4e-06 57.4 30 83.3
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 1.9e-06 57.0 61 45.9
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 4.1e-06 55.8 33 75.8


User provided reference genes

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