Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 2.2e-106 389.0 208 100.0
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 6.3e-93 344.4 208 88.5
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 3.8e-90 335.1 208 85.6
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 4.2e-89 331.6 204 85.8
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 1.8e-87 326.2 207 83.6
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 2.2e-85 319.3 207 81.2
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 4.1e-84 315.1 207 80.2
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 5.3e-84 314.7 207 80.7
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 3.5e-83 312.0 209 82.8
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 8.0e-80 300.8 212 77.4
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 1.1e-76 290.4 208 75.0
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 2.0e-75 286.2 208 73.6
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 1.0e-74 283.9 203 74.4
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 9.4e-73 277.3 208 72.1
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 2.1e-72 276.2 207 72.5
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 3.6e-72 275.4 201 75.6
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 1.4e-71 273.5 207 70.5
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 2.3e-71 272.7 205 71.2
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 4.0e-71 271.9 191 74.9
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 6.8e-71 271.2 194 72.2
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.2e-70 270.4 202 71.3
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.5e-70 270.0 208 73.1
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 2.6e-70 269.2 204 70.6
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 3.4e-70 268.9 208 73.6
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 5.7e-70 268.1 199 71.4
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 6.3e-69 264.6 208 67.3
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 8.3e-69 264.2 209 69.9
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 1.1e-68 263.8 209 68.4
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.4e-68 263.5 183 73.8
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 4.1e-68 261.9 199 73.4
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 7.0e-68 261.2 198 69.7
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 1.6e-67 260.0 210 70.0
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 1.6e-67 260.0 207 67.6
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 5.9e-67 258.1 192 71.9
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.0e-66 257.3 194 68.6
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 1.3e-66 256.9 185 72.4
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 1.3e-66 256.9 193 71.0
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 3.8e-66 255.4 208 65.4
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.8e-66 255.4 208 65.4
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 3.8e-66 255.4 192 71.4
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 1.1e-65 253.8 207 69.1
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 1.5e-65 253.4 205 66.8
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.9e-65 253.1 202 69.3
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 2.1e-64 249.6 194 68.0
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 2.1e-64 249.6 208 63.9
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 2.8e-64 249.2 208 67.8
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 6.1e-64 248.1 187 70.1
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 1.8e-63 246.5 188 72.3
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.8e-63 246.5 197 66.5
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 3.0e-63 245.7 205 65.9
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 4.0e-63 245.4 193 69.4
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 4.0e-63 245.4 209 65.1
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 6.8e-63 244.6 191 66.0
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 6.8e-63 244.6 218 63.8
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 8.9e-63 244.2 207 63.8
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 1.5e-62 243.4 194 66.0
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 1.5e-62 243.4 218 63.3
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 3.7e-61 238.8 200 62.5
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 3.7e-61 238.8 228 57.5
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 8.3e-61 237.7 186 65.1
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 8.3e-61 237.7 199 62.8
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 8.3e-61 237.7 187 65.2
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 1.4e-60 236.9 200 62.5
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 3.1e-60 235.7 198 65.2
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 1.2e-59 233.8 207 63.3
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 1.6e-59 233.4 208 63.5
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 1.6e-59 233.4 186 64.5
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 2.0e-59 233.0 207 62.3
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 1.1e-57 227.3 193 65.3
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 4.3e-57 225.3 224 57.6
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 5.6e-57 224.9 225 57.3
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 7.3e-57 224.6 187 62.6
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 3.1e-55 219.2 197 60.4
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 5.2e-55 218.4 177 63.8
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 6.8e-55 218.0 201 59.7
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 6.8e-55 218.0 196 61.7
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 1.2e-54 217.2 191 60.7
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 1.2e-54 217.2 191 60.7
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 1.2e-54 217.2 191 60.7
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.2e-54 217.2 208 59.1
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 1.5e-54 216.9 185 65.4
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 5.8e-54 214.9 213 56.8
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 1.3e-53 213.8 202 57.4
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 1.3e-53 213.8 202 57.4
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 2.9e-53 212.6 190 60.5
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 2.9e-53 212.6 187 62.6
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 2.9e-53 212.6 166 64.5
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 4.9e-53 211.8 180 62.2
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 1.1e-52 210.7 151 69.5
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 1.4e-52 210.3 185 58.9
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 1.9e-52 209.9 183 59.6
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 3.2e-52 209.1 198 59.1
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 4.1e-52 208.8 247 53.4
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 1.0e-50 204.1 155 65.8
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 2.3e-50 203.0 197 58.9
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 3.0e-50 202.6 208 56.7
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 3.9e-50 202.2 151 71.5
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 3.9e-50 202.2 218 54.6
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 3.9e-50 202.2 205 53.7
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 6.6e-50 201.4 204 57.4
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 8.6e-50 201.1 151 71.5
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 2.5e-49 199.5 207 57.5
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 2.5e-49 199.5 181 55.8
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 7.3e-49 198.0 134 76.1
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 1.1e-47 194.1 141 70.9
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.8e-47 193.4 144 69.4
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 1.5e-46 190.3 205 51.2
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.6e-43 180.3 205 52.7
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 3.9e-42 175.6 183 54.6
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 1.5e-41 173.7 124 68.5
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 1.9e-41 173.3 135 73.3
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 8.1e-40 167.9 108 75.9
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 1.4e-39 167.2 136 69.1
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 1.7e-37 160.2 111 67.6
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 1.1e-33 147.5 122 67.2
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 2.1e-32 143.3 113 66.4
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.2e-30 137.5 110 61.8
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 7.6e-30 134.8 82 82.9
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.4e-28 130.6 99 69.7
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 2.7e-27 126.3 83 75.9
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 6.0e-27 125.2 83 74.7
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 3.0e-26 122.9 83 74.7
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 3.6e-24 115.9 206 38.3
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 1.8e-23 113.6 119 50.4
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 3.1e-23 112.8 180 33.9
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 6.9e-23 111.7 148 45.3
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 2.0e-22 110.2 70 77.1
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 2.6e-22 109.8 108 52.8
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 3.4e-22 109.4 151 47.0
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 8.4e-21 104.8 78 67.9
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 2.4e-20 103.2 66 81.8
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 4.2e-20 102.4 183 36.1
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 1.3e-18 97.4 67 70.1
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 4.8e-16 89.0 108 40.7
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 1.9e-12 77.0 139 35.3
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 1.3e-08 64.3 82 47.6


User provided reference genes

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