Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 6.9e-99 364.0 188 100.0
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 4.1e-91 338.2 179 96.6
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 7.4e-85 317.4 173 92.5
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 4.8e-84 314.7 172 92.4
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 5.3e-83 311.2 174 91.4
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 4.2e-80 301.6 173 87.9
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 5.5e-80 301.2 181 86.7
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 1.0e-78 297.0 174 87.4
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 1.4e-78 296.6 165 92.1
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 2.3e-78 295.8 173 85.5
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 3.0e-78 295.4 173 86.1
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 9.1e-75 283.9 173 84.4
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 1.6e-74 283.1 181 79.6
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 2.9e-73 278.9 184 79.9
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 1.5e-72 276.6 171 84.8
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 2.3e-65 252.7 151 84.8
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 2.9e-65 252.3 165 76.4
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 3.6e-63 245.4 164 75.6
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 4.7e-63 245.0 169 70.4
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 6.1e-63 244.6 164 74.4
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 1.4e-62 243.4 168 73.2
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 1.4e-62 243.4 168 72.0
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 2.3e-62 242.7 165 74.5
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 3.0e-62 242.3 164 75.0
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 6.8e-62 241.1 166 72.9
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 6.8e-62 241.1 175 70.9
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 6.8e-62 241.1 164 72.6
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 8.8e-62 240.7 158 74.7
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 1.2e-61 240.4 165 71.5
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 2.6e-61 239.2 166 72.3
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 3.4e-61 238.8 169 71.0
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 4.4e-61 238.4 168 70.2
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 4.4e-61 238.4 155 76.8
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 4.4e-61 238.4 166 72.9
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 5.7e-61 238.0 167 74.3
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 5.7e-61 238.0 155 76.8
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 5.7e-61 238.0 169 71.0
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 7.5e-61 237.7 158 74.7
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 7.5e-61 237.7 165 72.1
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 7.5e-61 237.7 169 71.6
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 9.8e-61 237.3 158 75.9
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 9.8e-61 237.3 156 75.0
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 1.3e-60 236.9 164 72.6
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 1.7e-60 236.5 158 73.4
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 2.2e-60 236.1 160 73.1
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 2.8e-60 235.7 158 74.7
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 3.7e-60 235.3 166 71.7
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 3.7e-60 235.3 166 71.1
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 4.9e-60 235.0 183 68.3
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 8.3e-60 234.2 158 73.4
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 8.3e-60 234.2 163 69.9
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.4e-59 233.4 163 71.8
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.8e-59 233.0 165 71.5
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 2.4e-59 232.6 170 68.8
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 2.4e-59 232.6 170 70.0
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 2.4e-59 232.6 164 70.1
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 3.1e-59 232.3 170 71.2
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 3.1e-59 232.3 168 70.8
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 4.1e-59 231.9 163 68.7
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 5.4e-59 231.5 164 70.7
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 5.4e-59 231.5 170 70.0
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 5.4e-59 231.5 155 72.9
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 5.4e-59 231.5 168 70.8
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 1.2e-58 230.3 172 70.3
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 1.2e-58 230.3 173 68.2
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 1.6e-58 229.9 164 71.3
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 2.0e-58 229.6 165 71.5
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 2.0e-58 229.6 158 72.2
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 2.7e-58 229.2 166 68.7
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 2.7e-58 229.2 166 68.7
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 2.7e-58 229.2 161 72.0
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 3.5e-58 228.8 158 72.2
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 5.9e-58 228.0 166 68.7
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 5.9e-58 228.0 183 67.2
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 5.9e-58 228.0 197 61.4
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 1.3e-57 226.9 155 73.5
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 2.3e-57 226.1 156 73.1
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 2.9e-57 225.7 161 71.4
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 2.9e-57 225.7 158 69.6
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 3.8e-57 225.3 155 74.2
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 5.0e-57 224.9 154 70.8
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 6.6e-57 224.6 166 68.1
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 8.6e-57 224.2 166 68.1
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 8.6e-57 224.2 156 69.9
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 1.5e-56 223.4 159 70.4
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.9e-56 223.0 156 71.8
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 3.3e-56 222.2 156 70.5
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 3.3e-56 222.2 164 68.9
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 4.3e-56 221.9 154 70.8
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 4.3e-56 221.9 165 67.9
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 9.5e-56 220.7 154 70.1
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 1.2e-55 220.3 159 69.8
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 2.1e-55 219.5 160 70.0
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 2.1e-55 219.5 162 68.5
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 6.1e-55 218.0 157 69.4
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 6.1e-55 218.0 166 67.5
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 2.3e-54 216.1 162 66.0
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 3.0e-54 215.7 156 70.5
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 1.2e-53 213.8 154 68.8
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 5.7e-53 211.5 164 66.5
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.2e-52 209.5 152 68.4
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 2.9e-52 209.1 157 68.8
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 4.9e-52 208.4 170 64.1
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 6.4e-52 208.0 158 67.1
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.4e-51 206.8 160 67.5
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 1.4e-51 206.8 159 66.7
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 5.4e-51 204.9 154 67.5
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 7.0e-51 204.5 203 56.2
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 9.2e-51 204.1 165 66.7
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 9.2e-51 204.1 215 55.3
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 1.2e-50 203.8 146 67.8
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 4.6e-50 201.8 158 65.8
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 7.8e-50 201.1 159 64.8
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.3e-48 195.7 148 67.6
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 4.3e-48 195.3 163 63.2
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 9.5e-48 194.1 164 62.2
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 2.8e-47 192.6 160 58.1
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 8.0e-47 191.0 172 59.9
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.5e-45 186.8 166 59.0
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.7e-44 183.3 138 69.6
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 4.1e-43 178.7 127 69.3
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 9.2e-43 177.6 116 75.0
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 1.7e-41 173.3 131 64.9
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 5.0e-41 171.8 182 52.2
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 4.3e-40 168.7 112 71.4
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 4.3e-40 168.7 149 58.4
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 1.2e-39 167.2 156 57.7
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 4.4e-37 158.7 155 58.1
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 7.5e-37 157.9 141 56.7
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 9.9e-37 157.5 112 74.1
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 9.9e-37 157.5 152 53.3
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 6.4e-36 154.8 103 78.6
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 4.1e-35 152.1 155 54.8
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 5.1e-33 145.2 157 54.8
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 6.6e-33 144.8 110 68.2
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 2.8e-31 139.4 105 68.6
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 8.1e-31 137.9 95 76.8
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 8.1e-31 137.9 98 65.3
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 5.2e-30 135.2 163 49.7
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 9.9e-29 131.0 108 66.7
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 8.4e-28 127.9 89 78.7
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 2.4e-27 126.3 99 67.7
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 5.1e-25 118.6 160 42.5
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 6.6e-25 118.2 85 74.1
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 8.6e-25 117.9 80 70.0
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 2.4e-22 109.8 135 40.7
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 2.2e-20 103.2 70 71.4
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 1.0e-17 94.4 74 60.8
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 1.7e-17 93.6 52 80.8
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 1.9e-16 90.1 58 74.1
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 1.9e-16 90.1 58 74.1
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 9.6e-16 87.8 151 36.4
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 3.1e-14 82.8 196 29.1
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 9.0e-14 81.3 111 49.5
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 1.7e-12 77.0 63 66.7
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 6.4e-12 75.1 52 80.8
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 6.4e-12 75.1 153 34.6
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 1.1e-08 64.3 45 66.7
arahy.Tifrunner.gnm1.ann1.7621NS Arachis hypogaea HOM05D054750 ORTHO05D005573 8.1e-07 58.2 32 84.4
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.4e-06 57.4 47 57.4


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