Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24855_v3 Cicer arietinum L. HOM05D013452 ORTHO05D013216 1.6e-83 313.5 273 100.0
Glyma.11G068900 Glycine max HOM05D013452 ORTHO05D013216 4.2e-28 129.4 310 42.3
TPR.G21443 Trifolium pratense HOM05D013452 ORTHO05D013216 5.6e-25 119.0 340 40.6
VMungo1077G0001 Vigna mungo HOM05D013452 ORTHO05D013216 6.5e-21 105.5 99 60.6
Medtr5g020520 Medicago truncatula HOM05D013452 ORTHO05D013216 2.3e-18 97.1 336 41.4
Psat2g158920 Pisum sativum HOM05D013452 ORTHO05D013216 3.8e-13 79.7 97 52.6
Phvul.002G031100 Phaseolus vulgaris HOM05D013452 ORTHO05D013216 1.6e-11 74.3 60 68.3
arahy.Tifrunner.gnm1.ann1.94NHE4 Arachis hypogaea HOM05D013452 ORTHO05D013216 1.8e-10 70.9 57 61.4
Lj2g0010277 Lotus japonicus HOM05D013452 ORTHO05D013216 3.0e-10 70.1 87 51.7
Lalb_Chr16g0391111 Lupinus albus HOM05D023582 ORTHO05D021493 2.5e-09 67.0 97 40.2
Ah.03g140950 Amaranthus hybridus HOM05D020462 ORTHO05D021197 7.4e-09 65.5 82 51.2
Lalb_Chr09g0322311 Lupinus albus HOM05D013452 ORTHO05D013216 1.4e-07 61.2 342 35.1
THA.LOC104807843 Tarenaya hassleriana HOM05D009606 ORTHO05D011759 6.9e-07 58.9 106 37.7
CSS0010032 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 9.0e-07 58.5 44 65.9
arahy.Tifrunner.gnm1.ann1.JE9L1P Arachis hypogaea HOM05D026528 ORTHO05D013216 1.2e-06 58.2 84 46.4
FvH4_1g13160 Fragaria vesca HOM05D018124 ORTHO05D019096 2.0e-06 57.4 85 43.5
FAN23G2557 Fragaria x ananassa HOM05D018124 ORTHO05D019096 2.0e-06 57.4 85 44.7
FAN26G1512 Fragaria x ananassa HOM05D018124 ORTHO05D019096 2.0e-06 57.4 85 43.5
FAN28G1327 Fragaria x ananassa HOM05D018124 ORTHO05D019096 2.0e-06 57.4 85 43.5
FAN28G1332 Fragaria x ananassa HOM05D018124 ORTHO05D019096 2.0e-06 57.4 85 43.5
arahy.Tifrunner.gnm1.ann1.32CIDB Arachis hypogaea HOM05D026528 ORTHO05D013216 2.6e-06 57.0 57 57.9
FAN19G0771 Fragaria x ananassa HOM05D018124 ORTHO05D019096 3.4e-06 56.6 85 43.5
Duzib147G1474 Durio zibethinus HOM05D019098 ORTHO05D019096 5.9e-06 55.8 40 72.5
Duzib187G1372 Durio zibethinus HOM05D019098 ORTHO05D025280 1.0e-05 55.1 40 70.0


User provided reference genes

Program Settings