Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24844_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 4.5e-144 514.6 266 100.0
Ca_24849_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 4.1e-113 411.8 273 82.4
Psat2g159520 Pisum sativum HOM05D004733 ORTHO05D005925 1.4e-97 360.1 288 68.1
Lj1g0005862 Lotus japonicus HOM05D004733 ORTHO05D005925 2.1e-93 346.3 288 63.9
VMungo1215G0507 Vigna mungo HOM05D004733 ORTHO05D005925 8.9e-92 340.9 288 62.8
arahy.Tifrunner.gnm1.ann1.VB3WEH Arachis hypogaea HOM05D004733 ORTHO05D005925 2.0e-91 339.7 288 62.5
arahy.Tifrunner.gnm1.ann1.6U5FTL Arachis hypogaea HOM05D004733 ORTHO05D005925 2.9e-90 335.9 288 61.5
arahy.Tifrunner.gnm1.ann1.VZ5KK1 Arachis hypogaea HOM05D004733 ORTHO05D005925 2.9e-90 335.9 288 61.8
Lalb_Chr16g0377811 Lupinus albus HOM05D004733 ORTHO05D005925 6.4e-90 334.7 288 62.5
Glyma.11G068600 Glycine max HOM05D004733 ORTHO05D005925 7.0e-89 331.3 287 62.7
Medtr5g020190 Medicago truncatula HOM05D004733 ORTHO05D005925 1.2e-88 330.5 289 63.7
Glyma.01G176400 Glycine max HOM05D004733 ORTHO05D005925 1.1e-86 323.9 288 60.8
Phvul.002G030700 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 1.9e-86 323.2 288 60.4
QL04p047829 Quercus lobata HOM05D004733 ORTHO05D005925 1.7e-79 300.1 299 54.5
Hma1.2p1_0789F.1_g218380 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 1.4e-76 290.4 262 58.0
TPR.G8389 Trifolium pratense HOM05D004733 ORTHO05D005925 2.0e-75 286.6 245 66.5
TWI77G0475 Tripterygium wilfordii HOM05D004733 ORTHO05D005925 6.4e-74 281.6 287 53.7
Thecc.01G034700 Theobroma cacao HOM05D004733 ORTHO05D005925 4.1e-73 278.9 292 52.4
CANSAT78G0304 Cannabis sativa HOM05D004733 ORTHO05D005925 5.4e-73 278.5 281 54.8
Prupe.7G155300 Prunus persica HOM05D004733 ORTHO05D005925 7.1e-73 278.1 288 52.4
Cfa004311 Carpinus fangiana HOM05D004733 ORTHO05D005925 2.1e-72 276.6 281 53.7
COL.COLO4_08906 Corchorus olitorius HOM05D004733 ORTHO05D005925 4.6e-72 275.4 292 51.4
RcHm_v2.0_Chr2g0101431 Rosa chinensis HOM05D004733 ORTHO05D005925 4.6e-72 275.4 292 51.7
FAN19G0915 Fragaria x ananassa HOM05D004733 ORTHO05D005925 5.1e-71 271.9 292 52.1
Hma1.2p1_0789F.1_g218390 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 5.1e-71 271.9 288 52.1
PGR119G1063 Punica granatum HOM05D004733 ORTHO05D005925 8.6e-71 271.2 289 50.2
CSS0026274 Camellia sinensis var. sinensis HOM05D004733 ORTHO05D005925 1.9e-70 270.0 291 49.1
FvH4_1g13250 Fragaria vesca HOM05D004733 ORTHO05D005925 1.9e-70 270.0 292 51.4
Cpa.g.sc6.117 Carica papaya HOM05D004733 ORTHO05D005925 2.5e-70 269.6 288 49.7
Duzib187G1802 Durio zibethinus HOM05D004733 ORTHO05D005925 7.3e-70 268.1 289 49.8
GSVIVG01018952001 Vitis vinifera HOM05D004733 ORTHO05D005925 1.2e-69 267.3 293 50.9
Atru.chr3.583 Acer truncatum HOM05D004733 ORTHO05D005925 2.8e-69 266.2 289 50.9
Actinidia36563 Actinidia chinensis HOM05D004733 ORTHO05D005925 4.7e-69 265.4 288 49.7
vmacro15553 Vaccinium macrocarpon HOM05D004733 ORTHO05D005925 6.2e-69 265.0 291 48.5
Ciclev10024776m.g Citrus clementina HOM05D004733 ORTHO05D005925 8.1e-69 264.6 288 50.0
Manes.02G094400 Manihot esculenta HOM05D004733 ORTHO05D005925 1.1e-68 264.2 290 49.7
Rhsim02G0060300 Rhododendron simsii HOM05D004733 ORTHO05D005925 1.4e-68 263.8 289 48.8
CiPaw.02G018200 Carya illinoinensis HOM05D004733 ORTHO05D005925 4.0e-68 262.3 285 51.6
Gohir.A11G184100 Gossypium hirsutum HOM05D004733 ORTHO05D005925 5.2e-68 261.9 289 49.1
Gohir.D11G190600 Gossypium hirsutum HOM05D004733 ORTHO05D005925 4.4e-67 258.8 289 48.8
MD02G1146900 Malus domestica HOM05D004733 ORTHO05D005925 1.3e-66 257.3 285 49.1
Gorai.007G203100 Gossypium raimondii HOM05D004733 ORTHO05D005925 4.9e-66 255.4 289 48.4
Cc03_g11520 Coffea canephora HOM05D004733 ORTHO05D005925 6.4e-66 255.0 291 49.5
Lj4A201T52 Lonicera japonica HOM05D004733 ORTHO05D005925 1.9e-65 253.4 291 47.8
Oeu017201.1 Olea europaea HOM05D004733 ORTHO05D005925 2.4e-65 253.1 312 45.8
PSO541G3573 Papaver somniferum HOM05D004733 ORTHO05D005925 5.4e-65 251.9 294 46.9
Nitab4.5_0001385g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 1.2e-64 250.8 291 49.8
Sabra07G0021700 Salix brachista HOM05D004733 ORTHO05D005925 2.1e-64 250.0 285 47.7
BcaNung05455 Brassica carinata HOM05D004733 ORTHO05D005925 2.7e-64 249.6 283 47.0
Dinv39990 Davidia involucrata HOM05D004733 ORTHO05D005925 3.5e-64 249.2 296 49.3
THA.LOC104809497 Tarenaya hassleriana HOM05D004733 ORTHO05D005925 3.5e-64 249.2 290 46.6
CAN.G358.91 Capsicum annuum HOM05D004733 ORTHO05D005925 6.0e-64 248.4 292 49.0
Nitab4.5_0000178g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 6.0e-64 248.4 291 49.1
Solyc02g085230.3 Solanum lycopersicum HOM05D004733 ORTHO05D005925 6.0e-64 248.4 291 49.5
Potri.007G024600 Populus trichocarpa HOM05D004733 ORTHO05D005925 7.8e-64 248.1 285 47.4
MELO3C022270.2 Cucumis melo HOM05D004733 ORTHO05D005925 1.0e-63 247.7 291 49.5
Peaxi162Scf00366g00125 Petunia axillaris HOM05D004733 ORTHO05D005925 1.3e-63 247.3 291 47.8
Sp7g34280 Schrenkiella parvula HOM05D004733 ORTHO05D005925 1.3e-63 247.3 288 45.8
PSO675G5282 Papaver somniferum HOM05D004733 ORTHO05D005925 2.3e-63 246.5 294 46.9
Sopen02g029930 Solanum pennellii HOM05D004733 ORTHO05D005925 2.3e-63 246.5 291 49.1
A08p22270 Brassica napus HOM05D004733 ORTHO05D005925 3.9e-63 245.7 288 46.5
ClCG06G002580 Citrullus lanatus HOM05D004733 ORTHO05D005925 3.9e-63 245.7 291 49.1
BraA08t34186Z Brassica rapa HOM05D004733 ORTHO05D005925 6.6e-63 245.0 288 46.5
AL2G11330 Arabidopsis lyrata HOM05D004733 ORTHO05D005925 1.5e-62 243.8 288 46.2
C03p80050 Brassica napus HOM05D004733 ORTHO05D005925 1.5e-62 243.8 288 45.8
BolC3t20259H Brassica oleracea HOM05D004733 ORTHO05D005925 1.5e-62 243.8 288 45.8
Carub.0002s0104 Capsella rubella HOM05D004733 ORTHO05D005925 1.5e-62 243.8 288 45.5
Aa31LG3G3780 Aethionema arabicum HOM05D004733 ORTHO05D005925 1.9e-62 243.4 289 46.4
CsaV3_5G036970 Cucumis sativus L. HOM05D004733 ORTHO05D005925 1.9e-62 243.4 291 48.8
Sed0013525 Sechium edule HOM05D004733 ORTHO05D005925 1.9e-62 243.4 290 47.6
Nn5g29624 Nelumbo nucifera HOM05D004733 ORTHO05D005925 5.6e-62 241.9 298 46.3
Thhalv10024292m.g Eutrema salsugineum HOM05D004733 ORTHO05D005925 9.6e-62 241.1 288 45.8
CsaV3_6G008550 Cucumis sativus L. HOM05D004733 ORTHO05D005925 1.3e-61 240.7 287 49.1
AUR62004057 Chenopodium quinoa HOM05D004733 ORTHO05D005925 3.6e-61 239.2 286 45.5
Aqoxy6G01122 Aquilegia oxysepala HOM05D004733 ORTHO05D005925 8.1e-61 238.0 294 45.6
AT1G63810 Arabidopsis thaliana HOM05D004733 ORTHO05D005925 2.4e-60 236.5 289 45.3
Migut.H00986 Erythranthe guttata HOM05D004733 ORTHO05D005925 4.0e-60 235.7 292 46.9
SHI09115 Sapria himalayana HOM05D004733 ORTHO05D005925 4.0e-60 235.7 304 45.7
AUR62007571 Chenopodium quinoa HOM05D004733 ORTHO05D005925 6.9e-60 235.0 286 45.1
Lsat_1_v5_gn_4_152020 Lactuca sativa HOM05D004733 ORTHO05D005925 9.0e-60 234.6 291 44.3
HanXRQChr09g0261511 Helianthus annuus HOM05D004733 ORTHO05D005925 1.5e-59 233.8 294 45.9
MSTRG.23523 Avicennia marina HOM05D004733 ORTHO05D005925 2.0e-59 233.4 292 46.2
EL10Ac6g15557 Beta vulgaris HOM05D004733 ORTHO05D005925 7.6e-59 231.5 284 45.1
Sc03g0003000 Simmondsia chinensis HOM05D004733 ORTHO05D005925 3.8e-58 229.2 289 45.3
ECA232G2226 Erigeron canadensis HOM05D004733 ORTHO05D005925 6.4e-58 228.4 295 43.1
SalBow2G0826 Salvia bowleyana HOM05D004733 ORTHO05D005925 2.4e-57 226.5 291 44.3
CARHR047390 Cardamine hirsuta HOM05D004733 ORTHO05D005925 4.2e-57 225.7 290 43.8
unitig_21.g20953 Utricularia gibba HOM05D004733 ORTHO05D005925 1.2e-56 224.2 291 44.0
Hund16432 Selenicereus undatus HOM05D004733 ORTHO05D005925 1.6e-56 223.8 304 41.1
FAN23G1660 Fragaria x ananassa HOM05D004733 ORTHO05D005925 3.5e-56 222.6 292 45.5
BcaC01g00457 Brassica carinata HOM05D004733 ORTHO05D005925 6.0e-56 221.9 288 43.4
Ah.03g140900 Amaranthus hybridus HOM05D004733 ORTHO05D005925 8.7e-55 218.0 284 41.9
arahy.Tifrunner.gnm1.ann1.T3TR42 Arachis hypogaea HOM05D004733 ORTHO05D005925 8.7e-55 218.0 225 54.2
FAN28G2014 Fragaria x ananassa HOM05D004733 ORTHO05D005925 1.8e-52 210.3 242 50.0
arahy.Tifrunner.gnm1.ann1.VLQ9MW Arachis hypogaea HOM05D004733 ORTHO05D005925 2.1e-48 196.8 209 52.6
A05p29530 Brassica napus HOM05D004733 ORTHO05D005925 5.6e-46 188.7 283 39.2
ATR0665G204 Amborella trichopoda HOM05D004733 ORTHO05D005925 1.3e-45 187.6 290 40.0
A05p29760 Brassica napus HOM05D004733 ORTHO05D005925 1.6e-45 187.2 283 39.2
SGA_v2.0_scaffold54G19532 Striga asiatica HOM05D004733 ORTHO05D005925 4.8e-45 185.7 291 40.2
MBI14_g08060_MAGBIO Magnolia biondii HOM05D004733 ORTHO05D005925 6.9e-44 181.8 295 38.0
Haze_15084 Corylus avellana HOM05D004733 ORTHO05D005925 3.4e-43 179.5 142 64.1
HPP92_009474 Vanilla planifolia HOM05D004733 ORTHO05D005925 4.9e-42 175.6 293 35.8
DCAR_017293 Daucus carota HOM05D004733 ORTHO05D005925 1.4e-41 174.1 239 44.8
TAR625G0290 Trochodendron aralioides HOM05D004733 ORTHO05D005925 2.5e-41 173.3 215 47.9
Actinidia12125 Actinidia chinensis HOM05D004733 ORTHO05D005925 9.7e-38 161.4 211 44.5
Zm00001eb139270 Zea mays HOM05D004733 ORTHO05D005925 3.1e-36 156.4 267 36.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.6e-35 153.3 305 36.4
SEGI_35015 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 2.6e-35 153.3 295 34.9
Os12g0166500 Oryza sativa ssp. japonica HOM05D004733 ORTHO05D005925 1.3e-34 151.0 295 34.2
SMO347G0575 Selaginella moellendorffii HOM05D004733 ORTHO05D005925 5.0e-34 149.1 289 36.3
Pp3c6_25920 Physcomitrium patens HOM05D004733 ORTHO05D005925 7.4e-30 135.2 293 35.2
QL06p046242 Quercus lobata HOM05D004733 ORTHO05D005925 9.7e-30 134.8 101 63.4
Eucgr.I02440 Eucalyptus grandis HOM05D004733 ORTHO05D005925 4.7e-24 115.9 93 58.1
Mapoly0060s0020 Marchantia polymorpha HOM05D004733 ORTHO05D005925 1.0e-23 114.8 292 30.5
Haze_15083 Corylus avellana HOM05D004733 ORTHO05D005925 6.9e-20 102.1 107 49.5
C05p48270 Brassica napus HOM05D004733 ORTHO05D005925 1.6e-11 74.3 55 60.0
A05p29540 Brassica napus HOM05D004733 ORTHO05D005925 1.0e-10 71.6 77 49.4
AagrBONN_evm.TU.Sc2ySwM_228.917 Anthoceros agrestis HOM05D004733 ORTHO05D005925 2.2e-10 70.5 98 40.8
MCO15G114 Micromonas commoda HOM05D004733 ORTHO05D005925 4.7e-08 62.8 148 34.5
CBR_g37736 Chara braunii HOM05D004733 ORTHO05D000048 5.7e-06 55.8 223 24.7


User provided reference genes

Program Settings