Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 2.1e-64 249.2 155 100.0
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 7.6e-51 204.1 162 82.7
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.5e-46 189.9 162 75.9
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 3.8e-42 175.3 150 79.3
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 2.4e-36 156.0 163 68.1
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 1.5e-35 153.3 156 67.9
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 3.8e-34 148.7 156 69.9
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 8.7e-31 137.5 160 63.8
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 8.7e-31 137.5 160 63.8
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 4.0e-28 128.6 162 63.6
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 6.9e-28 127.9 144 71.5
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.7e-26 123.2 165 62.4
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.2e-26 122.9 165 61.8
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 4.2e-25 118.6 163 60.7
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 5.5e-25 118.2 138 63.8
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 1.6e-24 116.7 159 58.5
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 2.1e-24 116.3 164 59.8
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 2.7e-24 115.9 137 65.0
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 3.5e-24 115.5 148 56.8
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 3.5e-24 115.5 159 57.2
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 4.6e-24 115.2 128 68.0
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.0e-23 114.0 138 63.0
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.8e-23 113.2 140 63.6
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.8e-23 113.2 140 63.6
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 2.3e-23 112.8 154 60.4
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.3e-23 112.8 165 58.8
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 3.0e-23 112.5 130 65.4
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 3.0e-23 112.5 149 60.4
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 5.1e-23 111.7 156 60.3
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 8.7e-23 110.9 127 66.1
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 8.7e-23 110.9 149 60.4
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 1.5e-22 110.2 122 69.7
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 3.3e-22 109.0 148 60.1
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 7.4e-22 107.8 136 62.5
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 7.4e-22 107.8 122 65.6
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 7.4e-22 107.8 144 59.0
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.3e-21 107.1 140 60.7
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 3.7e-21 105.5 145 61.4
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 1.8e-20 103.2 140 62.1
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 1.8e-20 103.2 122 66.4
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.8e-20 103.2 165 56.4
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.1e-20 102.4 129 62.0
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 4.0e-20 102.1 123 65.0
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 4.0e-20 102.1 128 65.6
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 5.3e-20 101.7 160 56.9
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 6.9e-20 101.3 122 66.4
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.2e-19 100.5 122 65.6
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.2e-19 100.5 144 56.2
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 1.2e-19 100.5 128 64.1
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 1.2e-19 100.5 128 64.1
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.5e-19 100.1 122 65.6
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 1.5e-19 100.1 146 58.9
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 3.4e-19 99.0 137 61.3
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 3.4e-19 99.0 137 61.3
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 3.4e-19 99.0 122 65.6
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 4.5e-19 98.6 122 65.6
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 7.6e-19 97.8 148 56.1
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 7.6e-19 97.8 121 66.9
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 1.0e-18 97.4 122 64.8
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 1.3e-18 97.1 160 55.0
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.3e-18 97.1 144 56.9
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 5.0e-18 95.1 134 57.5
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 5.0e-18 95.1 144 56.2
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 6.5e-18 94.7 124 63.7
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 1.1e-17 94.0 137 61.3
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.9e-17 93.2 144 56.9
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 4.2e-17 92.0 144 55.6
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 7.1e-17 91.3 119 63.0
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 7.1e-17 91.3 113 61.9
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 7.1e-17 91.3 141 56.0
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 9.3e-17 90.9 132 58.3
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 9.3e-17 90.9 120 59.2
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.6e-16 90.1 149 56.4
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 2.1e-16 89.7 143 57.3
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 3.5e-16 89.0 133 47.4
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 3.5e-16 89.0 127 56.7
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 4.6e-16 88.6 127 60.6
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 6.1e-16 88.2 143 55.9
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.1e-16 88.2 141 57.4
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.8e-15 86.7 129 59.7
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 3.9e-15 85.5 141 56.0
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 6.7e-15 84.7 148 56.1
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 1.5e-14 83.6 125 58.4
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 4.3e-14 82.0 128 58.6
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 7.4e-14 81.3 125 54.4
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.3e-13 80.5 148 52.7
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.6e-13 80.1 151 49.7
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.6e-13 80.1 201 42.8
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.2e-13 79.7 124 58.1
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 6.3e-13 78.2 119 57.1
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 1.4e-12 77.0 124 58.1
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.8e-12 76.6 94 69.1
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 1.8e-12 76.6 153 49.7
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 3.1e-12 75.9 119 58.0
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 5.3e-12 75.1 105 62.9
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 5.3e-12 75.1 100 67.0
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.6e-11 72.8 127 47.2
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.3e-10 70.5 149 49.0
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 6.5e-10 68.2 121 49.6
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 3.2e-09 65.9 137 47.4


User provided reference genes

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