Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 2.4e-88 328.9 180 100.0
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 4.6e-60 235.0 189 72.5
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 2.0e-58 229.6 180 68.9
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 3.7e-57 225.3 180 68.9
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 8.2e-57 224.2 180 68.3
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 4.5e-55 218.4 180 65.6
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 4.5e-55 218.4 180 67.2
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 8.5e-54 214.2 180 66.7
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 5.7e-50 201.4 200 62.5
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 3.7e-49 198.7 187 63.1
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 1.8e-48 196.4 183 64.5
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 1.2e-47 193.7 187 62.0
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.0e-43 180.6 183 58.5
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 2.6e-42 176.0 181 58.0
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 4.4e-42 175.3 174 58.6
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 7.5e-42 174.5 180 56.7
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 9.7e-42 174.1 180 56.1
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 3.7e-41 172.2 189 57.7
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 4.8e-41 171.8 179 57.5
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 4.8e-41 171.8 179 58.1
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 9.1e-40 167.5 176 54.5
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 9.1e-40 167.5 180 57.2
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.2e-39 167.2 180 57.2
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.2e-39 167.2 181 57.5
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 3.5e-39 165.6 180 57.2
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 7.7e-39 164.5 178 55.6
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 1.0e-38 164.1 177 57.1
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 1.0e-38 164.1 180 56.1
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 1.1e-37 160.6 181 54.1
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 1.9e-37 159.8 180 53.3
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.5e-37 159.5 181 53.0
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 3.2e-37 159.1 180 53.9
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 1.2e-36 157.1 180 56.1
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 1.6e-36 156.8 179 55.9
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.6e-36 156.8 181 55.8
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 2.1e-36 156.4 180 52.2
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 2.1e-36 156.4 180 53.9
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 2.7e-36 156.0 178 51.7
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 6.1e-36 154.8 180 51.1
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 1.8e-35 153.3 181 52.5
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 5.2e-35 151.8 181 51.4
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 5.2e-35 151.8 181 51.9
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 6.8e-35 151.4 182 53.8
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 8.8e-35 151.0 181 51.4
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 1.2e-34 150.6 181 52.5
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 2.6e-34 149.4 186 48.9
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 2.2e-33 146.4 194 47.9
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 1.8e-32 143.3 175 48.0
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 4.1e-32 142.1 183 50.3
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 5.4e-32 141.7 180 47.8
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 9.1e-32 141.0 181 48.6
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 2.0e-31 139.8 178 48.9
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 1.3e-30 137.1 175 50.9
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 2.3e-30 136.3 178 50.6
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 2.9e-30 136.0 180 47.2
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 3.8e-30 135.6 184 48.9
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 5.0e-30 135.2 177 48.6
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 8.6e-30 134.4 181 47.0
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 1.9e-29 133.3 185 49.7
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 4.2e-29 132.1 184 45.7
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 7.2e-29 131.3 180 46.7
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 9.5e-29 131.0 186 47.8
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 6.1e-28 128.3 181 47.5
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 5.2e-27 125.2 178 47.2
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 6.8e-27 124.8 186 44.1
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 6.8e-27 124.8 183 43.7
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 2.0e-26 123.2 184 45.1
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 4.4e-26 122.1 248 37.9
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.3e-25 120.6 179 45.3
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 1.7e-25 120.2 190 42.1
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 2.8e-25 119.4 181 45.3
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 4.9e-25 118.6 183 43.2
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.8e-24 116.7 181 44.8
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 2.4e-24 116.3 276 35.1
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 4.1e-24 115.5 177 45.8
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 4.1e-24 115.5 135 53.3
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 7.0e-24 114.8 171 40.9
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 7.0e-24 114.8 187 43.3
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 7.0e-24 114.8 98 64.3
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 1.6e-23 113.6 180 42.2
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 3.5e-23 112.5 179 42.5
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 3.5e-23 112.5 220 37.3
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 4.5e-23 112.1 171 42.7
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 5.0e-22 108.6 162 42.6
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 8.6e-22 107.8 178 41.6
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.5e-21 107.1 137 50.4
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 4.3e-21 105.5 181 42.5
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 9.5e-21 104.4 180 40.0
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 2.1e-20 103.2 186 41.4
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 2.8e-20 102.8 178 39.9
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 3.6e-20 102.4 184 41.8
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 4.7e-20 102.1 181 40.9
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 4.7e-20 102.1 181 40.9
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.0e-19 100.9 175 42.3
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.0e-19 100.9 142 50.0
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 3.0e-19 99.4 231 38.5
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 6.8e-19 98.2 126 51.6
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 2.6e-18 96.3 181 42.0
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 4.4e-18 95.5 178 39.3
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 4.4e-18 95.5 178 39.3
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 2.2e-17 93.2 148 42.6
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 2.2e-17 93.2 127 53.5
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 8.3e-17 91.3 181 40.9
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 8.3e-17 91.3 176 39.2
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 1.6e-15 87.0 82 54.9
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 5.9e-15 85.1 98 49.0
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 7.8e-15 84.7 98 48.0
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 9.5e-13 77.8 185 36.2
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.6e-12 75.9 79 53.2
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.4e-10 68.9 139 40.3
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.4e-10 68.9 139 40.3
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 4.9e-09 65.5 56 53.6
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 8.3e-09 64.7 71 50.7
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 2.4e-08 63.2 78 48.7
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 2.3e-06 56.6 177 31.1


User provided reference genes

Program Settings