Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24799_v3 Cicer arietinum L. HOM05D000289 ORTHO05D009609 4.0e-57 224.6 116 100.0
Medtr5g018250 Medicago truncatula HOM05D000289 ORTHO05D009609 2.8e-42 175.3 116 79.3
TPR.G11350 Trifolium pratense HOM05D000289 ORTHO05D009609 1.0e-39 166.8 125 75.2
Psat2g164680 Pisum sativum HOM05D000289 ORTHO05D009609 5.7e-35 151.0 111 71.2
Phvul.002G021800 Phaseolus vulgaris HOM05D000289 ORTHO05D009609 6.3e-34 147.5 116 66.4
Lj2g0014406 Lotus japonicus HOM05D000289 ORTHO05D009609 2.6e-32 142.1 116 69.8
VMungo1215G1697 Vigna mungo HOM05D000289 ORTHO05D009609 3.5e-32 141.7 116 64.7
Glyma.11G059100 Glycine max HOM05D000289 ORTHO05D009609 1.1e-30 136.7 116 63.8
Glyma.01G183200 Glycine max HOM05D000289 ORTHO05D009609 7.2e-30 134.0 116 62.1
Lalb_Chr09g0322971 Lupinus albus HOM05D000289 ORTHO05D009609 3.6e-29 131.7 113 66.4
Medtr5g018190 Medicago truncatula HOM05D000289 ORTHO05D009609 1.4e-25 119.8 77 75.3
Cfa016388 Carpinus fangiana HOM05D000289 ORTHO05D009609 8.0e-21 104.0 115 51.3
TWI53G1138 Tripterygium wilfordii HOM05D000289 ORTHO05D009609 3.0e-20 102.1 116 47.4
CiPaw.01G025400 Carya illinoinensis HOM05D000289 ORTHO05D009609 6.8e-20 100.9 113 50.4
MD02G1163700 Malus domestica HOM05D000289 ORTHO05D009609 1.2e-19 100.1 116 47.4
FvH4_1g15000 Fragaria vesca HOM05D000289 ORTHO05D009609 2.6e-19 99.0 116 43.1
Medtr5g018080 Medicago truncatula HOM05D000289 ORTHO05D009609 2.6e-19 99.0 63 74.6
FAN26G0234 Fragaria x ananassa HOM05D000289 ORTHO05D009609 9.7e-19 97.1 116 43.1
Potri.007G038500 Populus trichocarpa HOM05D000289 ORTHO05D009609 1.3e-18 96.7 115 46.1
Prupe.7G140200 Prunus persica HOM05D000289 ORTHO05D009609 2.2e-18 95.9 116 44.8
CSS0030947 Camellia sinensis var. sinensis HOM05D000289 ORTHO05D009609 3.7e-18 95.1 116 50.0
Medtr5g018110 Medicago truncatula HOM05D000529 ORTHO05D009609 6.3e-18 94.4 63 69.8
Ciclev10026468m.g Citrus clementina HOM05D000289 ORTHO05D009609 1.4e-17 93.2 118 49.2
arahy.Tifrunner.gnm1.ann1.SZY8GR Arachis hypogaea HOM05D000289 ORTHO05D009609 2.4e-17 92.4 116 44.0
Thecc.01G050100 Theobroma cacao HOM05D000289 ORTHO05D009609 7.0e-17 90.9 111 49.5
Dinv39898 Davidia involucrata HOM05D000289 ORTHO05D009609 9.1e-17 90.5 116 47.4
Atru.chr3.436 Acer truncatum HOM05D000289 ORTHO05D009609 2.0e-16 89.4 116 44.0
vmacro17914 Vaccinium macrocarpon HOM05D000289 ORTHO05D009609 2.0e-16 89.4 118 46.6
TAR628G0284 Trochodendron aralioides HOM05D000289 ORTHO05D009609 3.5e-16 88.6 110 42.7
PSO541G2148 Papaver somniferum HOM05D000289 ORTHO05D009609 1.7e-15 86.3 115 40.0
GSVIVG01005053001 Vitis vinifera HOM05D000289 ORTHO05D009609 1.7e-15 86.3 118 45.8
Rhsim08G0104600 Rhododendron simsii HOM05D000289 ORTHO05D009609 5.0e-15 84.7 118 42.4
PSO675G0040 Papaver somniferum HOM05D000289 ORTHO05D009609 8.5e-15 84.0 115 39.1
CANSAT01G1070 Cannabis sativa HOM05D000289 ORTHO05D009609 1.1e-14 83.6 128 42.2
Manes.13G128900 Manihot esculenta HOM05D000289 ORTHO05D009609 1.1e-14 83.6 117 45.3
Atru.chr3.435 Acer truncatum HOM05D000289 ORTHO05D009609 1.9e-14 82.8 85 48.2
Gohir.D10G095100 Gossypium hirsutum HOM05D000289 ORTHO05D009609 2.5e-14 82.4 111 43.2
TPR.G1702 Trifolium pratense HOM05D000529 ORTHO05D000472 9.4e-14 80.5 57 78.9
Nn6g32098 Nelumbo nucifera HOM05D000289 ORTHO05D009609 1.2e-13 80.1 115 39.1
SGA_v2.0_scaffold204G41603 Striga asiatica HOM05D000289 ORTHO05D009609 1.2e-13 80.1 116 40.5
RhsimUnG0071000 Rhododendron simsii HOM05D000289 ORTHO05D009609 1.6e-13 79.7 110 39.1
Gohir.A10G093100 Gossypium hirsutum HOM05D000289 ORTHO05D009609 3.6e-13 78.6 106 42.5
Lj7A50T11 Lonicera japonica HOM05D000289 ORTHO05D009609 3.6e-13 78.6 116 39.7
Actinidia30856 Actinidia chinensis HOM05D000289 ORTHO05D009609 6.1e-13 77.8 112 42.9
Lj7A45G56 Lonicera japonica HOM05D000289 ORTHO05D009609 6.1e-13 77.8 116 39.7
Aqoxy6G00894 Aquilegia oxysepala HOM05D000289 ORTHO05D009609 1.0e-12 77.0 109 36.7
Haze_15457 Corylus avellana HOM05D000289 ORTHO05D009609 1.0e-12 77.0 116 42.2
Gorai.011G104500 Gossypium raimondii HOM05D000289 ORTHO05D009609 1.4e-12 76.6 106 42.5
Cfa003964 Carpinus fangiana HOM05D000289 ORTHO05D009609 1.8e-12 76.3 116 41.4
COL.COLO4_11345 Corchorus olitorius HOM05D000289 ORTHO05D009609 4.0e-12 75.1 125 38.4
FAN19G0017 Fragaria x ananassa HOM05D000289 ORTHO05D009609 6.8e-12 74.3 102 35.3
Hma1.2p1_2791F.1_g328620 Hydrangea macrophylla HOM05D000289 ORTHO05D009609 6.8e-12 74.3 111 41.4
MBI16_g19910_MAGBIO Magnolia biondii HOM05D000289 ORTHO05D009609 1.2e-11 73.6 77 42.9
CDE01G0553 Ceratophyllum demersum HOM05D000323 ORTHO05D000201 2.6e-11 72.4 107 37.4
Duzib187G1431 Durio zibethinus HOM05D000289 ORTHO05D009609 4.4e-11 71.6 98 44.9
Nitab4.5_0007024g0060 Nicotiana tabacum HOM05D000289 ORTHO05D009609 9.8e-11 70.5 90 38.9
Sopen02g035070 Solanum pennellii HOM05D000289 ORTHO05D009609 1.7e-10 69.7 70 51.4
DCAR_025702 Daucus carota HOM05D000289 ORTHO05D009609 6.3e-10 67.8 116 37.9
Migut.H00471 Erythranthe guttata HOM05D000289 ORTHO05D009609 6.3e-10 67.8 115 38.3
FAN28G0819 Fragaria x ananassa HOM05D000289 ORTHO05D009609 6.3e-10 67.8 116 34.5
THA.LOC104807574 Tarenaya hassleriana HOM05D000289 ORTHO05D009609 6.3e-10 67.8 107 39.3
TPR.G40334 Trifolium pratense HOM05D000289 ORTHO05D009609 8.3e-10 67.4 54 66.7
HanXRQChr14g0430741 Helianthus annuus HOM05D000289 ORTHO05D009609 1.4e-09 66.6 120 35.0
Nitab4.5_0002157g0050 Nicotiana tabacum HOM05D000289 ORTHO05D009609 1.4e-09 66.6 90 36.7
PGSC0003DMG400010069 Solanum tuberosum HOM05D000289 ORTHO05D009609 1.8e-09 66.2 117 36.8
Lsat_1_v5_gn_4_168300 Lactuca sativa HOM05D000289 ORTHO05D009609 3.1e-09 65.5 119 34.5
ECA232G3611 Erigeron canadensis HOM05D000289 ORTHO05D009609 4.1e-09 65.1 118 33.9
SalBow1G4948 Salvia bowleyana HOM05D000289 ORTHO05D009609 9.1e-09 63.9 116 36.2
Thhalv10000566m.g Eutrema salsugineum HOM05D000289 ORTHO05D009609 4.5e-08 61.6 114 34.2
FAN23G2350 Fragaria x ananassa HOM05D000289 ORTHO05D009609 4.5e-08 61.6 76 40.8
Cc03_g08140 Coffea canephora HOM05D000289 ORTHO05D009609 7.7e-08 60.8 72 40.3
Oeu004884.1 Olea europaea HOM05D000289 ORTHO05D009609 7.7e-08 60.8 85 37.6
CAN.G836.49 Capsicum annuum HOM05D000289 ORTHO05D009609 1.3e-07 60.1 122 34.4
BcaC07g40980 Brassica carinata HOM05D000289 ORTHO05D009609 1.7e-07 59.7 115 31.3
C08p39800 Brassica napus HOM05D000289 ORTHO05D009609 2.3e-07 59.3 115 31.3
BolC8t51552H Brassica oleracea HOM05D000289 ORTHO05D009609 2.3e-07 59.3 115 31.3
Peaxi162Scf00993g00335 Petunia axillaris HOM05D000289 ORTHO05D009609 5.0e-07 58.2 73 42.5
A09p56840 Brassica napus HOM05D000289 ORTHO05D009609 8.6e-07 57.4 116 29.3
Duzib084G1047 Durio zibethinus HOM05D000289 ORTHO05D000208 8.6e-07 57.4 111 35.1
BraA09t41075Z Brassica rapa HOM05D000289 ORTHO05D009609 1.5e-06 56.6 116 29.3
Hma1.2p1_2182F.1_g316330 Hydrangea macrophylla HOM05D000289 ORTHO05D000208 1.5e-06 56.6 113 30.1
THA.LOC104817753 Tarenaya hassleriana HOM05D000289 ORTHO05D000208 1.5e-06 56.6 112 33.0
Sp7g00440 Schrenkiella parvula HOM05D000289 ORTHO05D000208 1.9e-06 56.2 112 32.1
MSTRG.11947 Avicennia marina HOM05D000289 ORTHO05D000208 2.5e-06 55.8 95 37.9
Sp4g02610 Schrenkiella parvula HOM05D000289 ORTHO05D009609 2.5e-06 55.8 114 31.6
Hund27239 Selenicereus undatus HOM05D000289 ORTHO05D000208 2.5e-06 55.8 104 34.6
SEGI_10815 Sequoiadendron giganteum HOM05D000289 ORTHO05D000208 2.5e-06 55.8 110 36.4
THA.LOC104813030 Tarenaya hassleriana HOM05D000289 ORTHO05D000208 3.3e-06 55.5 99 34.3
Sed0002599 Sechium edule HOM05D000289 ORTHO05D000208 4.2e-06 55.1 93 33.3
Hund11426 Selenicereus undatus HOM05D000289 ORTHO05D000208 4.2e-06 55.1 107 35.5
AL7G47800 Arabidopsis lyrata HOM05D000289 ORTHO05D000208 7.2e-06 54.3 108 31.5
A09p14980 Brassica napus HOM05D000289 ORTHO05D000208 9.5e-06 53.9 103 35.0
BraA09t37143Z Brassica rapa HOM05D000289 ORTHO05D000208 9.5e-06 53.9 103 35.0
Os06g0503400 Oryza sativa ssp. japonica HOM05D000289 ORTHO05D000208 9.5e-06 53.9 99 32.3


User provided reference genes

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