Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 0.0e+00 1144.8 570 100.0
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 9.5e-293 1009.6 571 87.4
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 3.6e-284 981.1 570 86.3
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 9.3e-280 966.5 571 84.2
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 6.9e-267 923.7 592 78.2
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 2.2e-265 918.7 573 80.1
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 1.0e-257 893.3 572 77.4
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 1.9e-253 879.0 572 76.6
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 3.3e-253 878.2 602 72.9
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 3.4e-250 868.2 573 76.4
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 1.4e-248 862.8 573 75.4
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 2.5e-240 835.5 573 73.3
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 2.8e-228 795.4 525 76.4
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 1.9e-224 782.7 575 67.8
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 1.8e-222 776.2 577 67.4
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 2.0e-218 762.7 574 64.8
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 5.9e-218 761.1 573 64.6
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 5.0e-217 758.1 574 63.8
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 6.5e-217 757.7 576 65.3
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 9.4e-216 753.8 575 64.7
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 2.1e-215 752.7 576 64.6
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 2.3e-214 749.2 574 64.3
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 4.0e-214 748.4 574 63.1
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 5.2e-214 748.0 576 64.8
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 5.2e-214 748.0 574 65.3
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 2.6e-213 745.7 575 63.8
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 2.2e-212 742.7 574 62.7
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 3.7e-212 741.9 575 63.8
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 3.7e-212 741.9 576 63.2
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 3.7e-212 741.9 576 64.6
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 4.1e-211 738.4 575 64.9
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 7.0e-211 737.6 584 63.0
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 4.5e-210 734.9 576 62.7
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 7.7e-210 734.2 576 62.5
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 6.5e-209 731.1 574 62.9
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 8.5e-209 730.7 573 62.8
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 8.5e-209 730.7 574 62.5
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 1.5e-208 729.9 575 63.5
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.2e-208 728.4 576 62.0
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 5.5e-208 728.0 576 63.7
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 1.8e-206 723.0 576 62.5
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 3.4e-205 718.8 574 61.5
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 1.7e-204 716.5 566 63.1
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 4.1e-203 711.8 573 62.8
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 3.5e-202 708.8 573 62.3
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 2.3e-201 706.1 574 60.1
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 2.9e-201 705.7 573 60.0
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 3.8e-201 705.3 575 60.2
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 5.0e-201 704.9 575 60.3
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 2.5e-200 702.6 574 60.6
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 4.3e-200 701.8 579 59.2
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 2.8e-199 699.1 576 60.4
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 6.1e-199 698.0 574 60.6
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 2.3e-198 696.0 573 59.5
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 6.8e-198 694.5 573 59.5
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 3.7e-196 688.7 576 57.5
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 8.3e-196 687.6 573 59.3
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 2.4e-195 686.0 575 59.0
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 7.0e-195 684.5 573 57.9
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 9.2e-195 684.1 603 57.5
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 1.2e-194 683.7 569 60.6
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 1.6e-194 683.3 575 57.7
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 3.5e-194 682.2 575 58.8
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 2.3e-193 679.5 575 59.8
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 3.0e-193 679.1 575 59.5
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 5.0e-193 678.3 576 59.5
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 4.3e-192 675.2 576 58.9
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 5.6e-192 674.9 576 59.0
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 7.3e-192 674.5 576 58.7
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 3.4e-189 665.6 578 57.8
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 3.7e-188 662.1 574 57.8
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 5.4e-187 658.3 574 58.5
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 6.0e-186 654.8 573 58.1
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 8.9e-182 641.0 573 55.8
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 8.9e-182 641.0 573 55.8
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 4.1e-179 632.1 602 54.5
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 3.5e-178 629.0 645 51.5
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 7.8e-178 627.9 576 54.2
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 1.7e-177 626.7 570 54.7
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 3.0e-177 625.9 570 54.9
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 3.0e-177 625.9 570 54.9
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 3.9e-177 625.5 575 55.0
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 4.3e-176 622.1 516 61.8
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 3.6e-175 619.0 495 63.2
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 2.2e-172 609.8 550 57.1
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 4.9e-172 608.6 530 57.7
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 2.4e-171 606.3 571 52.5
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 2.3e-169 599.7 544 56.2
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 1.2e-167 594.0 552 54.7
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 1.1e-166 590.9 504 59.7
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 2.0e-165 586.6 678 47.1
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 1.2e-157 560.8 475 59.2
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 6.0e-154 548.5 428 64.0
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 1.6e-151 540.4 432 62.7
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 3.2e-147 526.2 422 62.1
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.3e-143 514.2 393 62.6
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 8.4e-140 501.5 552 47.1
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 3.5e-138 496.1 498 53.4
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 1.1e-136 491.1 572 46.9
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 9.6e-136 488.0 393 61.1
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 3.4e-133 479.6 470 54.0
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.1e-122 443.7 367 61.0
Atru.chr3.424 Acer truncatum HOM05D005552 ORTHO05D006743 7.4e-120 435.3 354 61.9
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 3.7e-119 433.0 462 50.9
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 5.5e-115 419.1 601 38.9
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 1.0e-105 388.3 566 39.6
HanXRQChr04g0119851 Helianthus annuus HOM05D005552 ORTHO05D006743 1.8e-105 387.5 303 61.7
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 6.3e-103 379.0 605 37.4
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 5.3e-102 375.9 475 44.8
unitig_26.g9473 Utricularia gibba HOM05D005552 ORTHO05D006743 2.5e-67 260.8 245 54.3
Atru.chr2.470 Acer truncatum HOM05D005552 ORTHO05D006743 3.3e-67 260.4 382 40.6
Psat4g201960 Pisum sativum HOM05D005552 ORTHO05D006743 1.0e-60 238.8 216 60.2
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 5.1e-60 236.5 527 32.8
unitig_26.g9472 Utricularia gibba HOM05D005552 ORTHO05D006743 2.9e-55 220.7 276 45.7
HanXRQChr04g0119841 Helianthus annuus HOM05D005552 ORTHO05D006743 2.5e-51 207.6 212 53.3
Atru.chr3.423 Acer truncatum HOM05D005552 ORTHO05D006743 2.1e-50 204.5 159 62.9
Psat1g136760 Pisum sativum HOM05D005552 ORTHO05D006743 3.1e-49 200.7 119 83.2
arahy.Tifrunner.gnm1.ann1.ENA0P5 Arachis hypogaea HOM05D005552 ORTHO05D006743 4.9e-39 166.8 99 78.8
arahy.Tifrunner.gnm1.ann1.S73BBB Arachis hypogaea HOM05D005552 ORTHO05D006743 4.9e-39 166.8 401 34.2
Psat5g241560 Pisum sativum HOM05D005552 ORTHO05D006743 8.7e-36 156.0 90 84.4
Cre01.g043700 Chlamydomonas reinhardtii HOM05D005552 ORTHO05D006743 4.8e-34 150.2 613 24.3
SHI23011 Sapria himalayana HOM05D005552 ORTHO05D006743 5.8e-32 143.3 149 51.7
MCO05G662 Micromonas commoda HOM05D005552 ORTHO05D006743 1.7e-31 141.7 463 26.1
Cfa026632 Carpinus fangiana HOM05D005552 ORTHO05D006743 3.9e-28 130.6 382 28.5
SHI23015 Sapria himalayana HOM05D005552 ORTHO05D006743 1.5e-27 128.6 123 52.0
Peaxi162Scf00073g00115 Petunia axillaris HOM05D005552 ORTHO05D006743 6.9e-25 119.8 74 67.6
C01p02170 Brassica napus HOM05D005552 ORTHO05D006743 6.0e-21 106.7 128 45.3
BolC1t00209H Brassica oleracea HOM05D005552 ORTHO05D006743 6.0e-21 106.7 128 45.3
CSS0040680 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.0e-15 89.4 129 44.2
TAR376G0458 Trochodendron aralioides HOM05D005552 ORTHO05D006743 6.5e-15 86.7 73 63.0
SHI23016 Sapria himalayana HOM05D000105 ORTHO05D000023 8.5e-15 86.3 56 66.1
Ah.11g041060 Amaranthus hybridus HOM05D005552 ORTHO05D006743 2.5e-14 84.7 52 71.2
CSS0023439 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 3.2e-14 84.3 81 56.8
Cpa.g.sc6.394 Carica papaya HOM05D005552 ORTHO05D006743 4.6e-13 80.5 123 40.7
FvH4_5g33501 Fragaria vesca HOM05D005552 ORTHO05D006743 6.3e-10 70.1 45 66.7
SEGI_06310 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 6.9e-09 66.6 51 56.9
arahy.Tifrunner.gnm1.ann1.SHY03S Arachis hypogaea HOM05D005552 ORTHO05D006743 2.9e-07 61.2 89 43.8
SHI23013 Sapria himalayana HOM05D001839 ORTHO05D001867 3.2e-06 57.8 90 37.8


User provided reference genes

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