Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24714_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 9.5e-50 201.1 230 100.0
Ca_24729_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 9.5e-50 201.1 230 100.0
Glyma.11G051300 Glycine max HOM05D008801 ORTHO05D010819 9.9e-23 111.3 86 76.7
Glyma.05G102100 Glycine max HOM05D008801 ORTHO05D010819 2.9e-22 109.8 231 72.3
Glyma.01G190900 Glycine max HOM05D008801 ORTHO05D010819 1.4e-21 107.5 87 73.6
arahy.Tifrunner.gnm1.ann1.N2JMJ4 Arachis hypogaea HOM05D008801 ORTHO05D010819 7.8e-20 101.7 90 67.8
Phvul.002G014100 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 1.3e-19 100.9 75 70.7
VMungo1215G0318 Vigna mungo HOM05D008801 ORTHO05D010819 2.3e-19 100.1 78 71.8
Medtr5g016250 Medicago truncatula HOM05D008801 ORTHO05D010819 8.7e-19 98.2 231 64.1
Lalb_Chr16g0378731 Lupinus albus HOM05D008801 ORTHO05D010819 5.6e-18 95.5 230 54.8
TPR.G26876 Trifolium pratense HOM05D008801 ORTHO05D010819 7.3e-18 95.1 78 74.4
arahy.Tifrunner.gnm1.ann1.EBVI20 Arachis hypogaea HOM05D008801 ORTHO05D010819 2.8e-17 93.2 248 64.9
Phvul.003G238200 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 1.8e-16 90.5 59 83.1
Lj2g0006888 Lotus japonicus HOM05D008801 ORTHO05D010819 5.3e-16 89.0 231 68.4
Gohir.A11G218200 Gossypium hirsutum HOM05D008801 ORTHO05D010819 9.9e-15 84.7 67 71.6
VMungo0251G0048 Vigna mungo HOM05D008801 ORTHO05D010819 2.9e-14 83.2 231 68.0
Ciclev10026322m.g Citrus clementina HOM05D008801 ORTHO05D010819 6.4e-14 82.0 86 57.0
Lalb_Chr05g0213471 Lupinus albus HOM05D008801 ORTHO05D010819 6.4e-14 82.0 74 68.9
THA.LOC104807612 Tarenaya hassleriana HOM05D008801 ORTHO05D010819 3.2e-13 79.7 85 56.5
COL.COLO4_11520 Corchorus olitorius HOM05D008801 ORTHO05D010819 2.7e-12 76.6 57 68.4
Duzib187G0657 Durio zibethinus HOM05D008801 ORTHO05D010819 3.5e-12 76.3 57 68.4
Duzib264G0993 Durio zibethinus HOM05D008801 ORTHO05D010819 3.9e-11 72.8 57 68.4
Carub.0007s0283 Capsella rubella HOM05D010159 ORTHO05D012416 8.7e-11 71.6 234 63.2
Gohir.D12G072500 Gossypium hirsutum HOM05D008801 ORTHO05D010819 1.1e-10 71.2 87 52.9
Gorai.008G079800 Gossypium raimondii HOM05D008801 ORTHO05D010819 1.1e-10 71.2 87 52.9
CSS0039488 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 3.3e-10 69.7 77 58.4
Thecc.01G067400 Theobroma cacao HOM05D008801 ORTHO05D010819 7.4e-10 68.6 57 66.7
Gohir.A12G067800 Gossypium hirsutum HOM05D008801 ORTHO05D010819 9.6e-10 68.2 57 61.4
Gohir.A12G068100 Gossypium hirsutum HOM05D008801 ORTHO05D010819 9.6e-10 68.2 57 61.4
Gorai.008G079900 Gossypium raimondii HOM05D008801 ORTHO05D010819 9.6e-10 68.2 57 61.4
CSS0031242 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 1.3e-09 67.8 77 57.1
Medtr4g095280 Medicago truncatula HOM05D008801 ORTHO05D010819 2.8e-09 66.6 231 62.3
AT4G37450 Arabidopsis thaliana HOM05D010159 ORTHO05D012416 3.7e-09 66.2 79 54.4
CiPaw.01G008400 Carya illinoinensis HOM05D008801 ORTHO05D010819 1.1e-08 64.7 51 70.6
Gohir.D12G072600 Gossypium hirsutum HOM05D008801 ORTHO05D010819 1.8e-08 63.9 57 57.9
Ca_13935_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 3.1e-08 63.2 233 61.4
Aa31LG6G14310 Aethionema arabicum HOM05D010159 ORTHO05D012416 5.3e-08 62.4 230 63.0
CARHR245850 Cardamine hirsuta HOM05D010159 ORTHO05D012416 6.9e-08 62.0 59 61.0
Manes.12G113000 Manihot esculenta HOM05D008801 ORTHO05D010819 1.5e-07 60.8 57 56.1
Duzib147G0385 Durio zibethinus HOM05D008801 ORTHO05D010819 3.4e-07 59.7 230 58.3
BcaNung02946 Brassica carinata HOM05D010159 ORTHO05D012416 4.5e-07 59.3 232 57.8
CiPaw.02G005000 Carya illinoinensis HOM05D013097 ORTHO05D010819 1.0e-06 58.2 54 61.1
Psat2g169560 Pisum sativum HOM05D008801 ORTHO05D010819 3.8e-06 56.2 57 66.7
AT2G23130 Arabidopsis thaliana HOM05D010159 ORTHO05D016615 4.9e-06 55.8 88 46.6
MELO3C007601.2 Cucumis melo HOM05D022074 ORTHO05D028887 6.4e-06 55.5 66 54.5
SGA_v2.0_scaffold15G07398 Striga asiatica HOM05D008801 ORTHO05D010819 6.4e-06 55.5 45 62.2
Lalb_Chr09g0323421 Lupinus albus HOM05D008801 ORTHO05D010819 8.4e-06 55.1 55 63.6


User provided reference genes

Program Settings