Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 1.3e-276 955.7 463 100.0
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 3.1e-225 785.0 419 89.7
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 1.4e-222 776.2 419 88.8
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 1.1e-219 766.5 419 88.8
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 8.2e-210 733.8 419 81.9
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 8.8e-204 713.8 419 81.1
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 1.4e-201 706.4 419 80.2
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 1.1e-198 696.8 421 79.8
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 1.1e-198 696.8 419 79.2
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.5e-190 669.8 419 75.9
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.5e-190 669.8 419 75.9
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 6.8e-172 607.8 419 71.8
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 4.6e-152 542.0 419 64.2
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 3.3e-150 535.8 419 63.5
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 5.6e-150 535.0 419 62.3
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 1.2e-149 533.9 420 63.3
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 8.1e-149 531.2 421 62.7
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 2.3e-148 529.6 419 63.0
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 5.2e-148 528.5 419 63.0
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 2.0e-147 526.6 417 62.8
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 4.4e-147 525.4 419 62.5
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 7.6e-147 524.6 420 62.9
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 1.7e-146 523.5 422 62.3
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 1.7e-146 523.5 417 63.3
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 1.7e-146 523.5 417 63.3
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 1.7e-146 523.5 419 62.8
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 2.2e-146 523.1 417 63.1
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 8.4e-146 521.2 419 62.3
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 1.1e-145 520.8 420 62.1
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 1.1e-145 520.8 422 62.1
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 7.1e-145 518.1 375 66.4
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 2.1e-144 516.5 419 61.1
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 1.0e-143 514.2 388 64.4
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 3.0e-143 512.7 417 61.4
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 1.1e-142 510.8 420 59.0
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 7.3e-142 508.1 419 61.3
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 8.1e-141 504.6 419 61.3
Manes.12G112200 Manihot esculenta HOM05D006669 ORTHO05D008440 3.1e-140 502.7 379 63.9
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 3.1e-140 502.7 419 58.7
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 8.9e-140 501.1 454 56.4
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 3.4e-139 499.2 454 56.2
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 3.4e-139 499.2 423 59.6
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 9.3e-137 491.1 415 60.2
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 8.7e-135 484.6 422 58.1
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 1.5e-134 483.8 420 56.0
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 5.6e-134 481.9 419 58.5
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 2.1e-133 479.9 419 57.3
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 2.1e-133 479.9 421 57.2
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 8.1e-133 478.0 423 57.7
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 1.4e-132 477.2 421 58.2
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 3.1e-132 476.1 421 57.5
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 3.1e-132 476.1 456 54.6
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 6.9e-132 474.9 421 58.0
TAR381G0156 Trochodendron aralioides HOM05D006669 ORTHO05D008440 6.9e-132 474.9 385 61.8
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 1.2e-131 474.2 422 56.9
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 1.5e-131 473.8 421 57.7
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 2.0e-131 473.4 421 57.7
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 2.0e-131 473.4 421 57.7
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 4.4e-131 472.2 420 56.0
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 7.6e-131 471.5 421 55.8
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 2.2e-130 469.9 421 56.5
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 2.2e-130 469.9 422 55.7
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 1.4e-129 467.2 419 55.8
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 4.6e-128 462.2 423 55.3
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 6.0e-128 461.8 420 56.0
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 1.0e-127 461.1 419 56.1
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 1.7e-127 460.3 419 55.4
Aa31LG6G14350 Aethionema arabicum HOM05D006669 ORTHO05D008440 1.8e-124 450.3 431 54.1
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 5.3e-124 448.7 419 54.9
MELO3C007610.2 Cucumis melo HOM05D006669 ORTHO05D008440 4.5e-123 445.7 420 53.3
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 9.9e-123 444.5 408 54.9
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 2.4e-121 439.9 426 51.6
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 2.4e-121 439.9 375 57.1
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 1.6e-120 437.2 419 52.0
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 1.0e-119 434.5 449 49.7
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 6.2e-117 425.2 436 48.2
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 4.5e-115 419.1 439 51.3
Nn1g04622 Nelumbo nucifera HOM05D006669 ORTHO05D008440 8.7e-111 404.8 419 51.6
Prupe.6G224500 Prunus persica HOM05D006669 ORTHO05D008440 7.4e-110 401.7 329 62.0
Peaxi162Scf01526g00017 Petunia axillaris HOM05D006669 ORTHO05D008440 1.1e-108 397.9 421 52.3
FvH4_1g17190 Fragaria vesca HOM05D006669 ORTHO05D008440 4.6e-104 382.5 331 59.5
PGR004G0108 Punica granatum HOM05D006669 ORTHO05D008440 1.1e-100 371.3 333 59.5
QL06p039922 Quercus lobata HOM05D006669 ORTHO05D008440 5.0e-98 362.5 305 62.0
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 2.7e-96 356.7 468 42.9
Hma1.2p1_1506F.1_g287540 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 2.7e-96 356.7 330 57.0
Os03g0761700 Oryza sativa ssp. japonica HOM05D006669 ORTHO05D008440 2.0e-94 350.5 423 46.3
SEGI_27298 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 1.5e-91 340.9 436 44.0
Thecc.01G068300 Theobroma cacao HOM05D006669 ORTHO05D008440 2.7e-88 330.1 302 57.3
DCAR_025954 Daucus carota HOM05D006669 ORTHO05D008440 5.2e-87 325.9 325 55.4
vmacro17989 Vaccinium macrocarpon HOM05D006669 ORTHO05D008440 1.8e-79 300.8 330 51.8
Sc16g0000050 Simmondsia chinensis HOM05D006669 ORTHO05D008440 1.1e-73 281.6 303 50.2
Zm00001eb214300 Zea mays HOM05D006669 ORTHO05D008440 1.5e-73 281.2 337 46.9
Hma1.2p1_1506F.1_g287530 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 3.6e-72 276.6 250 58.8
MSTRG.2837 Avicennia marina HOM05D006669 ORTHO05D008440 4.7e-72 276.2 305 51.8
unitig_62.g23421 Utricularia gibba HOM05D006669 ORTHO05D008440 5.2e-63 246.1 297 46.1
TPR.G627 Trifolium pratense HOM05D006669 ORTHO05D008440 2.8e-61 240.4 131 89.3
Mapoly0045s0047 Marchantia polymorpha HOM05D006669 ORTHO05D008440 9.2e-60 235.3 435 35.4
HPP92_000758 Vanilla planifolia HOM05D006669 ORTHO05D008440 1.0e-58 231.9 229 51.5
AagrBONN_evm.TU.Sc2ySwM_228.5150 Anthoceros agrestis HOM05D006669 ORTHO05D008440 6.2e-48 196.1 374 34.2
Pp3c5_10140 Physcomitrium patens HOM05D006669 ORTHO05D008440 2.0e-46 191.0 455 31.2
QL06p039919 Quercus lobata HOM05D006669 ORTHO05D008440 4.9e-45 186.4 115 70.4
Glyma.01G216100 Glycine max HOM05D006669 ORTHO05D008440 1.3e-34 151.8 106 73.6
Manes.01G047215 Manihot esculenta HOM05D006669 ORTHO05D008440 8.6e-34 149.1 90 67.8
HanXRQChr08g0218031 Helianthus annuus HOM05D006669 ORTHO05D008440 1.5e-30 138.3 96 70.8
GSVIVG01000157001 Vitis vinifera HOM05D006669 ORTHO05D008440 9.2e-28 129.0 131 48.9
Hma1.2p1_1506F.1_g287550 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 3.6e-24 117.1 79 63.3
HPP92_000757 Vanilla planifolia HOM05D006669 ORTHO05D008440 7.1e-20 102.8 108 47.2
SEGI_19371 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 1.0e-18 99.0 85 54.1
Manes.07G077122 Manihot esculenta HOM05D006669 ORTHO05D008440 5.3e-15 86.7 40 80.0
MCO03G360 Micromonas commoda HOM05D006669 ORTHO05D008440 1.9e-12 78.2 298 27.5
Dinv26898 Davidia involucrata HOM05D006669 ORTHO05D008440 8.7e-10 69.3 52 59.6
Cre09.g389001 Chlamydomonas reinhardtii HOM05D006669 ORTHO05D008440 6.2e-08 63.2 122 29.5
Zm00001eb058160 Zea mays HOM05D006669 ORTHO05D008440 1.2e-06 58.9 50 56.0


User provided reference genes

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