Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 8.2e-54 213.4 102 100.0
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 2.1e-41 172.2 103 81.6
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 7.5e-39 163.7 106 80.2
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 1.2e-36 156.4 102 73.5
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 7.7e-36 153.7 103 75.7
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 1.7e-35 152.5 107 71.0
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 1.7e-35 152.5 107 71.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 8.5e-35 150.2 105 71.4
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 5.5e-34 147.5 102 72.5
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 2.1e-33 145.6 103 71.8
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 1.0e-32 143.3 104 71.2
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 8.3e-30 133.7 102 67.6
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.1e-29 133.3 102 67.6
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.1e-29 131.3 102 66.7
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 7.0e-29 130.6 99 65.7
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 67.0
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.6e-28 129.4 102 64.7
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.5e-28 127.9 102 66.7
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.9e-28 127.5 111 59.5
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 5.9e-28 127.5 111 58.6
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 7.7e-28 127.1 102 61.8
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 7.7e-28 127.1 102 66.7
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 1.0e-27 126.7 111 57.7
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 1.0e-27 126.7 111 57.7
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 1.3e-27 126.3 102 61.8
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 1.7e-27 125.9 102 62.7
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 1.7e-27 125.9 111 57.7
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.3e-27 125.6 111 58.6
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 3.8e-27 124.8 102 63.7
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 3.8e-27 124.8 117 57.3
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 3.8e-27 124.8 118 56.8
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 3.8e-27 124.8 102 63.7
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 5.0e-27 124.4 103 61.2
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 6.5e-27 124.0 106 62.3
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 8.6e-27 123.6 107 66.4
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 1.1e-26 123.2 103 61.2
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.1e-26 123.2 103 62.1
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.1e-26 123.2 99 65.7
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 1.1e-26 123.2 102 59.8
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.1e-26 123.2 103 65.0
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 58.3
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 1.9e-26 122.5 102 60.8
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 2.5e-26 122.1 102 58.8
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.5e-26 122.1 106 64.2
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.5e-26 122.1 102 63.7
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 3.3e-26 121.7 102 60.8
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 4.2e-26 121.3 102 61.8
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 4.2e-26 121.3 105 60.0
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 5.5e-26 120.9 109 57.8
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 7.2e-26 120.6 102 61.8
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 7.2e-26 120.6 102 61.8
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 7.2e-26 120.6 102 59.8
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 7.2e-26 120.6 103 62.1
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.6e-25 119.4 104 62.5
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.6e-25 119.4 104 62.5
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 2.1e-25 119.0 108 56.5
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 2.8e-25 118.6 105 64.8
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 3.6e-25 118.2 98 61.2
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 3.6e-25 118.2 102 60.8
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 4.7e-25 117.9 102 60.8
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 4.7e-25 117.9 104 63.5
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 4.7e-25 117.9 104 63.5
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.1e-25 117.5 105 61.9
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 6.1e-25 117.5 104 57.7
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 8.0e-25 117.1 104 56.7
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 8.0e-25 117.1 104 57.7
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.0e-24 116.7 104 62.5
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.0e-24 116.7 104 56.7
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.0e-24 116.7 104 57.7
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.0e-24 116.7 107 56.1
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-24 116.3 107 58.9
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-24 116.3 107 58.9
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-24 116.3 107 58.9
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.4e-24 116.3 104 56.7
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 1.4e-24 116.3 107 61.7
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 1.4e-24 116.3 102 60.8
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.8e-24 115.9 102 61.8
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 2.3e-24 115.5 102 62.7
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 2.3e-24 115.5 102 62.7
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 5.2e-24 114.4 102 56.9
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 5.2e-24 114.4 102 61.8
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 8.9e-24 113.6 104 55.8
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 1.2e-23 113.2 102 57.8
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.2e-23 113.2 99 56.6
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 1.5e-23 112.8 102 59.8
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 2.0e-23 112.5 102 57.8
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 2.0e-23 112.5 104 59.6
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 2.0e-23 112.5 102 58.8
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 2.6e-23 112.1 103 60.2
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 2.6e-23 112.1 103 60.2
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 2.6e-23 112.1 103 60.2
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 2.6e-23 112.1 105 61.0
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 2.6e-23 112.1 102 55.9
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 3.4e-23 111.7 62 80.6
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 4.4e-23 111.3 103 58.3
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 4.4e-23 111.3 102 59.8
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 4.4e-23 111.3 104 54.8
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 7.5e-23 110.5 102 56.9
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.8e-23 110.2 102 61.8
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.8e-23 110.2 102 61.8
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 9.8e-23 110.2 102 61.8
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-22 109.8 94 62.8
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.7e-22 109.4 105 57.1
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.7e-22 109.4 105 57.1
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.8e-22 108.6 104 59.6
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 3.7e-22 108.2 102 55.9
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.4e-21 106.3 102 54.9
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 2.4e-21 105.5 92 60.9
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 4.1e-21 104.8 97 58.8
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 7.0e-21 104.0 64 75.0
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 2.7e-20 102.1 67 74.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 4.5e-20 101.3 67 73.1
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.3e-19 99.8 108 52.8
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 1.5e-18 96.3 104 51.0
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 5.2e-16 87.8 67 67.2
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 6.8e-16 87.4 56 73.2
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.5e-15 86.3 81 51.9
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 5.8e-15 84.3 67 68.7
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 6.4e-14 80.9 61 60.7
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 8.3e-14 80.5 102 43.1
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 8.3e-14 80.5 97 50.5
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.1e-13 80.1 121 42.1
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 1.4e-13 79.7 55 67.3
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 2.0e-12 75.9 86 43.0
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 6.0e-12 74.3 89 46.1
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 1.1e-10 70.1 112 41.1
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.1e-09 65.9 71 52.1
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.8e-09 65.5 71 50.7
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.8e-08 62.8 32 81.2
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 5.8e-07 57.8 97 39.2


User provided reference genes

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