Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24614_v3 Cicer arietinum L. HOM05D001047 ORTHO05D000768 2.2e-28 128.3 65 100.0
Psat2g175680 Pisum sativum HOM05D001047 ORTHO05D000768 7.6e-21 103.2 66 81.8
Medtr5g013520 Medicago truncatula HOM05D001047 ORTHO05D000768 2.2e-20 101.7 61 85.2
TPR.G31421 Trifolium pratense HOM05D001047 ORTHO05D000768 4.2e-19 97.4 66 80.3
Medtr5g013530 Medicago truncatula HOM05D001047 ORTHO05D000768 1.3e-17 92.4 65 78.5
Lj2g0003101 Lotus japonicus HOM05D001047 ORTHO05D000768 1.5e-16 89.0 66 77.3
Glyma.11G038600 Glycine max HOM05D001047 ORTHO05D000768 1.8e-14 82.0 68 70.6
Medtr5g013515 Medicago truncatula HOM05D001047 ORTHO05D000768 4.1e-14 80.9 48 81.2
Phvul.002G002000 Phaseolus vulgaris HOM05D001047 ORTHO05D000768 1.2e-13 79.3 62 72.6
Glyma.01G204400 Glycine max HOM05D001047 ORTHO05D000768 5.9e-13 77.0 68 67.6
Lalb_Chr05g0214211 Lupinus albus HOM05D001047 ORTHO05D000768 1.1e-11 72.8 59 59.3
Lalb_Chr09g0324131 Lupinus albus HOM05D001047 ORTHO05D000768 1.9e-11 72.0 59 61.0
VMungo1215G0723 Vigna mungo HOM05D001047 ORTHO05D000768 1.9e-11 72.0 67 67.2
Lalb_Chr13g0299341 Lupinus albus HOM05D001047 ORTHO05D000768 3.5e-10 67.8 50 70.0
Lalb_Chr23g0276321 Lupinus albus HOM05D001047 ORTHO05D000768 6.1e-10 67.0 52 69.2
Lj4A916T17 Lonicera japonica HOM05D001047 ORTHO05D000768 1.0e-09 66.2 50 64.0
vmacro17112 Vaccinium macrocarpon HOM05D001047 ORTHO05D000768 1.8e-09 65.5 51 68.6
Thecc.09G073600 Theobroma cacao HOM05D001047 ORTHO05D000768 6.7e-09 63.5 52 69.2
arahy.Tifrunner.gnm1.ann1.DQCW8K Arachis hypogaea HOM05D001047 ORTHO05D000768 8.7e-09 63.2 62 59.7
arahy.Tifrunner.gnm1.ann1.X6RF7Y Arachis hypogaea HOM05D001047 ORTHO05D000768 8.7e-09 63.2 62 59.7
Lalb_Chr11g0074131 Lupinus albus HOM05D001047 ORTHO05D000768 8.7e-09 63.2 52 63.5
Duzib168G2328 Durio zibethinus HOM05D001047 ORTHO05D000768 1.1e-08 62.8 51 62.7
Lalb_Chr07g0181301 Lupinus albus HOM05D001047 ORTHO05D000768 1.9e-08 62.0 49 63.3
Potri.006G139400 Populus trichocarpa HOM05D001047 ORTHO05D000768 4.3e-08 60.8 49 57.1
TAR624G0161 Trochodendron aralioides HOM05D001047 ORTHO05D000768 5.7e-08 60.5 53 66.0
Aqoxy7G01011 Aquilegia oxysepala HOM05D001047 ORTHO05D000768 9.7e-08 59.7 51 66.7
arahy.Tifrunner.gnm1.ann1.76C240 Arachis hypogaea HOM05D001047 ORTHO05D000768 9.7e-08 59.7 46 65.2
CSS0031905 Camellia sinensis var. sinensis HOM05D001047 ORTHO05D000768 9.7e-08 59.7 50 66.0
Duzib187G0215 Durio zibethinus HOM05D001047 ORTHO05D000768 1.6e-07 58.9 51 60.8
Dinv42416 Davidia involucrata HOM05D001047 ORTHO05D000768 2.2e-07 58.5 50 62.0
Glyma.09G071600 Glycine max HOM05D001047 ORTHO05D000768 2.2e-07 58.5 51 60.8
Gohir.D05G036200 Gossypium hirsutum HOM05D001047 ORTHO05D000768 2.2e-07 58.5 50 58.0
Gorai.009G036800 Gossypium raimondii HOM05D001047 ORTHO05D000768 2.2e-07 58.5 50 58.0
Glyma.15G179600 Glycine max HOM05D001047 ORTHO05D000768 2.8e-07 58.2 51 62.7
TAR691G0001 Trochodendron aralioides HOM05D001047 ORTHO05D000768 2.8e-07 58.2 52 61.5
Cpa.g.sc1667.1 Carica papaya HOM05D001047 ORTHO05D000768 3.7e-07 57.8 50 58.0
Duzib150G0095 Durio zibethinus HOM05D001047 ORTHO05D000768 3.7e-07 57.8 51 58.8
Eucgr.C03301 Eucalyptus grandis HOM05D001047 ORTHO05D000768 3.7e-07 57.8 51 60.8
Glyma.13G112000 Glycine max HOM05D001047 ORTHO05D000768 3.7e-07 57.8 51 56.9
Gohir.A05G034800 Gossypium hirsutum HOM05D001047 ORTHO05D000768 3.7e-07 57.8 50 56.0
Lalb_Chr08g0232721 Lupinus albus HOM05D001047 ORTHO05D000768 3.7e-07 57.8 52 61.5
vmacro06350 Vaccinium macrocarpon HOM05D001047 ORTHO05D000768 3.7e-07 57.8 50 60.0
GSVIVG01015042001 Vitis vinifera HOM05D001047 ORTHO05D000768 3.7e-07 57.8 52 63.5
Cfa002963 Carpinus fangiana HOM05D001047 ORTHO05D000768 4.8e-07 57.4 53 58.5
Zm00001eb109190 Zea mays HOM05D001047 ORTHO05D000768 4.8e-07 57.4 52 61.5
COL.COLO4_18064 Corchorus olitorius HOM05D001047 ORTHO05D000768 6.3e-07 57.0 51 58.8
Lalb_Chr12g0200271 Lupinus albus HOM05D001047 ORTHO05D000768 6.3e-07 57.0 44 72.7
MBI13_g00692_MAGBIO Magnolia biondii HOM05D001047 ORTHO05D000768 6.3e-07 57.0 49 65.3
MD15G1220400 Malus domestica HOM05D001047 ORTHO05D000768 6.3e-07 57.0 51 56.9
Os03g0402800 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 6.3e-07 57.0 48 60.4
PSO386G0059 Papaver somniferum HOM05D001047 ORTHO05D000768 6.3e-07 57.0 57 56.1
PSO724G1109 Papaver somniferum HOM05D001047 ORTHO05D000768 6.3e-07 57.0 57 56.1
Glyma.17G047700 Glycine max HOM05D001047 ORTHO05D000768 8.2e-07 56.6 52 59.6
Gohir.A06G078400 Gossypium hirsutum HOM05D001047 ORTHO05D000768 8.2e-07 56.6 51 60.8
arahy.Tifrunner.gnm1.ann1.0AWF5M Arachis hypogaea HOM05D001047 ORTHO05D000768 1.1e-06 56.2 52 57.7
arahy.Tifrunner.gnm1.ann1.W1F2QM Arachis hypogaea HOM05D001047 ORTHO05D000768 1.1e-06 56.2 52 57.7
CiPaw.04G141300 Carya illinoinensis HOM05D001047 ORTHO05D000768 1.1e-06 56.2 53 58.5
Rhsim03G0226700 Rhododendron simsii HOM05D001047 ORTHO05D000768 1.1e-06 56.2 50 60.0
Atru.chr7.1739 Acer truncatum HOM05D001047 ORTHO05D000768 1.4e-06 55.8 55 60.0
CiPaw.03G203400 Carya illinoinensis HOM05D001047 ORTHO05D000768 1.4e-06 55.8 55 54.5
Prupe.7G194800 Prunus persica HOM05D001047 ORTHO05D000768 1.4e-06 55.8 51 58.8
TWI34G1575 Tripterygium wilfordii HOM05D001047 ORTHO05D000768 1.4e-06 55.8 53 60.4
Zm00001eb414910 Zea mays HOM05D001047 ORTHO05D000768 1.4e-06 55.8 52 59.6
Ca_02220_v3 Cicer arietinum L. HOM05D001047 ORTHO05D000768 1.8e-06 55.5 51 54.9
MD02G1096100 Malus domestica HOM05D001047 ORTHO05D000768 2.4e-06 55.1 51 56.9
Actinidia30242 Actinidia chinensis HOM05D001047 ORTHO05D000768 3.1e-06 54.7 50 56.0
Ciclev10008653m.g Citrus clementina HOM05D001047 ORTHO05D000768 3.1e-06 54.7 52 59.6
Gohir.D06G077500 Gossypium hirsutum HOM05D001047 ORTHO05D000768 4.1e-06 54.3 50 54.0
Gorai.010G090600 Gossypium raimondii HOM05D001047 ORTHO05D000768 4.1e-06 54.3 50 54.0
Hma1.2p1_0542F.1_g175000 Hydrangea macrophylla HOM05D001047 ORTHO05D000768 4.1e-06 54.3 46 60.9
Manes.16G093500 Manihot esculenta HOM05D001047 ORTHO05D000768 4.1e-06 54.3 54 63.0
PSO104G0045 Papaver somniferum HOM05D001047 ORTHO05D000768 4.1e-06 54.3 55 52.7
Lj7A689T75 Lonicera japonica HOM05D001047 ORTHO05D000768 5.3e-06 53.9 50 64.0
CDE04G3301 Ceratophyllum demersum HOM05D001047 ORTHO05D000768 6.9e-06 53.5 46 63.0
Lj6g0004228 Lotus japonicus HOM05D001047 ORTHO05D000768 6.9e-06 53.5 44 65.9
Os07g0615200 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 6.9e-06 53.5 50 58.0
TWI32G0022 Tripterygium wilfordii HOM05D001047 ORTHO05D000768 6.9e-06 53.5 52 57.7
Sc18g0002760 Simmondsia chinensis HOM05D001047 ORTHO05D000768 9.0e-06 53.1 51 52.9


User provided reference genes

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