Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 1.2e-136 490.0 265 100.0
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 3.4e-91 339.0 303 68.6
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 2.7e-88 329.3 305 66.9
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 2.8e-85 319.3 303 64.7
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 1.2e-75 287.3 319 58.9
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 3.3e-70 269.2 310 57.4
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 6.2e-69 265.0 299 58.5
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 2.9e-66 256.1 299 55.2
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 8.1e-61 238.0 333 50.2
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 8.1e-61 238.0 333 50.2
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 5.2e-60 235.3 302 51.3
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 7.6e-59 231.5 313 48.9
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.3e-58 230.7 310 50.3
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 8.4e-58 228.0 301 50.8
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.4e-57 227.3 302 51.0
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 3.5e-56 222.6 302 50.0
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.1e-55 218.8 302 49.7
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 1.6e-53 213.8 299 47.8
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 3.6e-53 212.6 301 49.8
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 4.8e-53 212.2 301 49.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 6.9e-52 208.4 305 46.9
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 9.0e-52 208.0 302 48.0
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.2e-51 207.6 293 48.8
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 2.0e-51 206.8 302 47.4
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 5.8e-51 205.3 302 47.0
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 9.9e-51 204.5 313 45.7
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.7e-50 203.8 302 47.0
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 3.8e-50 202.6 304 48.4
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.1e-49 201.1 301 45.5
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 2.4e-49 199.9 300 46.0
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 2.4e-49 199.9 310 46.5
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 3.2e-49 199.5 311 46.0
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 3.2e-49 199.5 294 48.0
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 9.3e-49 198.0 311 44.1
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 2.1e-48 196.8 310 46.5
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 3.5e-48 196.1 298 45.6
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 4.6e-48 195.7 299 45.2
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 4.6e-48 195.7 300 45.3
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 8.7e-47 191.4 303 46.5
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.1e-46 191.0 304 44.7
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 4.3e-46 189.1 312 41.3
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 1.6e-45 187.2 313 45.0
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 4.8e-45 185.7 296 42.6
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 8.1e-45 184.9 256 48.8
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 3.1e-44 183.0 298 44.6
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 6.9e-44 181.8 309 43.0
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.3e-42 177.6 264 43.6
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 6.4e-42 175.3 297 42.8
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.4e-41 174.1 314 41.4
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.9e-41 173.7 301 44.2
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 2.4e-41 173.3 305 42.0
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 5.4e-41 172.2 285 43.2
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 1.2e-40 171.0 300 41.3
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 1.6e-40 170.6 301 42.9
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 3.5e-40 169.5 300 43.0
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 4.6e-40 169.1 300 42.3
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 2.3e-39 166.8 299 41.1
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.0e-39 166.4 301 42.9
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 3.9e-39 166.0 214 52.3
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 1.5e-38 164.1 321 40.5
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.9e-38 163.7 332 40.4
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 1.1e-36 157.9 304 40.8
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 5.3e-36 155.6 289 40.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.2e-35 154.5 311 41.5
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 5.5e-33 145.6 305 35.7
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.9e-31 139.4 293 37.2
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 6.7e-31 138.7 308 35.4
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 4.3e-30 136.0 291 38.5
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 4.3e-30 136.0 205 44.4
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.8e-29 132.5 270 38.1
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 1.1e-28 131.3 259 40.5
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 4.0e-28 129.4 229 40.2
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.2e-27 127.9 276 35.9
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.6e-27 126.7 272 38.6
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 1.0e-26 124.8 272 36.8
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.0e-26 124.8 274 39.4
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 1.0e-26 124.8 291 38.5
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.7e-26 124.0 265 37.7
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 6.5e-26 122.1 272 36.8
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 8.4e-26 121.7 271 37.6
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 1.4e-25 120.9 269 37.2
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.9e-25 120.6 258 37.6
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 3.2e-25 119.8 273 37.0
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.2e-25 119.4 270 35.6
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 4.2e-25 119.4 283 37.5
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 5.5e-25 119.0 273 37.0
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 5.5e-25 119.0 204 43.1
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 7.1e-25 118.6 292 38.0
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 2.1e-24 117.1 280 36.4
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.5e-24 116.3 255 34.9
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 6.1e-24 115.5 262 35.5
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.3e-23 114.4 274 38.0
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 1.5e-22 110.9 274 36.5
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 9.7e-22 108.2 222 42.8
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 4.8e-21 105.9 196 39.8
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 1.4e-20 104.4 193 38.9
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 1.4e-20 104.4 248 37.1
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 4.1e-20 102.8 262 34.0
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 3.4e-19 99.8 63 84.1
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 5.0e-18 95.9 61 85.2
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 7.2e-17 92.0 193 35.8
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 1.6e-16 90.9 189 36.0
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.0e-15 86.7 203 33.0
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 1.7e-13 80.9 254 33.5
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 3.7e-13 79.7 152 40.1
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 4.8e-13 79.3 234 32.1
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 6.3e-13 79.0 237 30.8
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 2.4e-12 77.0 266 32.0
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 3.1e-12 76.6 291 29.9
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 5.3e-12 75.9 182 34.6
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 2.0e-11 73.9 214 32.7


User provided reference genes

Program Settings