Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 1.6e-65 252.7 130 100.0
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 7.5e-60 233.8 131 91.6
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 4.8e-59 231.1 128 90.6
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 1.8e-58 229.2 128 89.1
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 2.4e-58 228.8 128 87.5
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 2.7e-57 225.3 128 85.9
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 2.3e-56 222.2 131 87.8
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 7.2e-55 217.2 126 85.7
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 9.5e-55 216.9 130 85.4
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 1.4e-53 213.0 129 83.7
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 3.0e-53 211.8 124 84.7
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 4.0e-53 211.5 128 83.6
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 2.0e-52 209.1 130 83.1
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 2.0e-52 209.1 130 80.8
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 2.0e-52 209.1 114 90.4
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 2.6e-52 208.8 124 83.1
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 4.4e-52 208.0 117 88.0
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 5.7e-52 207.6 120 85.0
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 5.7e-52 207.6 120 85.0
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 5.7e-52 207.6 120 85.0
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 7.5e-52 207.2 124 82.3
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 9.8e-52 206.8 126 81.7
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 1.3e-51 206.5 127 82.7
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 1.7e-51 206.1 115 87.8
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 3.7e-51 204.9 130 80.8
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 3.7e-51 204.9 129 78.3
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 6.3e-51 204.1 128 80.5
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 1.4e-50 203.0 130 80.0
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 1.8e-50 202.6 128 79.7
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 7.0e-50 200.7 124 78.2
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 9.2e-50 200.3 115 85.2
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 9.2e-50 200.3 118 83.9
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 1.2e-49 199.9 153 70.6
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 1.2e-49 199.9 153 70.6
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 1.2e-49 199.9 120 82.5
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 1.6e-49 199.5 130 82.3
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 5.9e-49 197.6 122 82.0
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 5.9e-49 197.6 125 78.4
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 7.8e-49 197.2 143 74.1
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 7.8e-49 197.2 143 74.1
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 2.3e-48 195.7 128 79.7
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 2.9e-48 195.3 129 77.5
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 6.6e-48 194.1 130 74.6
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 3.3e-47 191.8 126 77.0
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 3.3e-47 191.8 118 80.5
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 5.6e-47 191.0 126 77.8
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 9.5e-47 190.3 122 77.0
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 1.2e-46 189.9 120 83.3
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 3.6e-46 188.3 120 78.3
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 8.0e-46 187.2 115 79.1
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 8.0e-46 187.2 116 79.3
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 8.0e-46 187.2 130 76.9
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 1.0e-45 186.8 126 74.6
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 1.0e-45 186.8 131 74.8
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 1.8e-45 186.0 128 75.0
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 2.3e-45 185.7 120 78.3
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 4.0e-45 184.9 116 81.0
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 4.0e-45 184.9 126 77.0
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 6.8e-45 184.1 135 70.4
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 6.8e-45 184.1 113 81.4
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 6.8e-45 184.1 120 76.7
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 6.8e-45 184.1 128 74.2
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 1.5e-44 183.0 131 74.0
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 1.5e-44 183.0 120 77.5
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 2.0e-44 182.6 116 78.4
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 2.6e-44 182.2 116 79.3
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 3.4e-44 181.8 144 72.2
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 3.4e-44 181.8 114 81.6
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 7.5e-44 180.6 113 79.6
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 7.5e-44 180.6 126 75.4
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 9.8e-44 180.3 133 71.4
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 1.3e-43 179.9 116 76.7
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 2.2e-43 179.1 125 71.2
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 4.9e-43 177.9 113 78.8
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 6.4e-43 177.6 121 76.0
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 1.9e-42 176.0 120 75.8
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 1.9e-42 176.0 164 62.2
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 2.0e-41 172.6 123 69.9
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 2.7e-41 172.2 117 75.2
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 4.6e-41 171.4 139 66.9
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.9e-39 166.0 182 54.9
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 1.9e-39 166.0 129 66.7
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.3e-39 164.9 118 70.3
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 5.6e-39 164.5 115 74.8
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 9.5e-39 163.7 117 68.4
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 9.5e-39 163.7 118 69.5
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 2.1e-38 162.5 118 68.6
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 2.8e-38 162.2 131 69.5
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 4.7e-38 161.4 115 73.9
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 1.4e-37 159.8 120 70.0
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.3e-37 159.1 113 74.3
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 5.2e-37 157.9 120 65.8
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 5.2e-37 157.9 116 67.2
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 5.8e-36 154.5 107 72.0
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 1.3e-35 153.3 114 67.5
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 1.3e-35 153.3 115 66.1
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 1.7e-35 152.9 118 66.9
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 2.9e-35 152.1 130 63.8
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 3.2e-34 148.7 118 63.6
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 7.0e-34 147.5 165 53.3
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.6e-33 146.4 125 65.6
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 3.5e-33 145.2 118 67.8
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 4.6e-33 144.8 106 68.9
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 1.7e-32 142.9 128 58.6
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 1.9e-31 139.4 112 67.0
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 2.5e-31 139.0 90 75.6
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 7.3e-31 137.5 112 66.1
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 1.6e-30 136.3 100 70.0
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 2.1e-30 136.0 127 57.5
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 2.8e-30 135.6 88 73.9
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 8.1e-30 134.0 85 76.5
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 2.3e-29 132.5 108 63.9
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 4.0e-29 131.7 121 62.0
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 5.2e-29 131.3 129 57.4
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 1.2e-28 130.2 129 57.4
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 2.0e-28 129.4 70 90.0
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.3e-27 126.7 182 45.6
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 1.3e-27 126.7 112 59.8
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 1.9e-26 122.9 101 61.4
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 1.6e-25 119.8 84 71.4
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 3.5e-25 118.6 69 82.6
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 3.0e-24 115.5 70 75.7
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 6.2e-22 107.8 111 57.7
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 3.8e-19 98.6 83 61.4
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 3.5e-17 92.0 60 76.7
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 6.2e-14 81.3 83 60.2
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 6.9e-13 77.8 65 53.8
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 1.3e-11 73.6 49 67.3
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 2.4e-10 69.3 66 57.6
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 2.4e-10 69.3 48 68.8
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-08 63.9 58 60.3
Duzib251G0730 Durio zibethinus HOM05D006060 ORTHO05D007268 4.3e-07 58.5 44 61.4


User provided reference genes

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