Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 5.7e-44 180.6 99 100.0
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 5.7e-44 180.6 99 100.0
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 2.8e-35 151.8 99 75.8
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 8.6e-32 140.2 100 73.0
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 1.5e-23 112.8 111 57.7
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 4.3e-23 111.3 98 53.1
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 6.8e-21 104.0 106 52.8
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 8.9e-21 103.6 108 56.5
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 2.9e-19 98.6 106 57.5
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 1.9e-18 95.9 107 45.8
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 9.2e-18 93.6 101 46.5
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.2e-17 93.2 98 52.0
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 2.7e-17 92.0 99 48.5
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.5e-17 91.7 100 49.0
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.5e-17 91.7 99 49.5
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 7.8e-17 90.5 102 46.1
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 7.8e-17 90.5 99 49.5
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 7.8e-17 90.5 99 50.5
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 2.3e-16 89.0 104 48.1
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.9e-16 88.2 102 54.9
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 5.0e-16 87.8 107 47.7
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 8.6e-16 87.0 105 47.6
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.5e-15 86.3 107 46.7
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 5.6e-15 84.3 103 46.6
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 9.5e-15 83.6 104 48.1
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.6e-14 82.8 103 46.6
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 1.6e-14 82.8 106 50.0
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 2.1e-14 82.4 98 44.9
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 2.1e-14 82.4 98 44.9
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 2.1e-14 82.4 98 44.9
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 2.8e-14 82.0 98 42.9
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 4.7e-14 81.3 96 54.2
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 4.7e-14 81.3 105 42.9
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 8.1e-14 80.5 106 45.3
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 1.4e-13 79.7 106 46.2
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 1.4e-13 79.7 107 44.9
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 3.1e-13 78.6 108 46.3
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 5.2e-13 77.8 98 44.9
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 5.2e-13 77.8 65 55.4
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 6.8e-13 77.4 114 43.9
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.2e-12 76.6 106 49.1
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.5e-12 76.3 106 48.1
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.6e-12 75.5 95 44.2
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 3.4e-12 75.1 102 44.1
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 4.4e-12 74.7 70 52.9
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 5.8e-12 74.3 68 57.4
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 5.8e-12 74.3 95 44.2
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 5.8e-12 74.3 86 46.5
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 7.5e-12 73.9 95 44.2
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 7.5e-12 73.9 72 52.8
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 9.9e-12 73.6 99 45.5
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 1.7e-11 72.8 70 54.3
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 1.7e-11 72.8 112 38.4
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 2.2e-11 72.4 99 45.5
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 2.2e-11 72.4 101 41.6
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.7e-11 71.6 104 43.3
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 4.9e-11 71.2 105 49.5
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 1.1e-10 70.1 110 41.8
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 1.1e-10 70.1 104 49.0
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 1.1e-10 70.1 107 39.3
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 1.4e-10 69.7 98 42.9
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 1.9e-10 69.3 98 50.0
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.9e-10 69.3 108 42.6
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 2.4e-10 68.9 107 38.3
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 3.2e-10 68.6 64 50.0
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 4.1e-10 68.2 96 43.8
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 7.1e-10 67.4 102 40.2
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.2e-09 66.6 97 38.1
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.2e-09 66.6 97 38.1
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 2.1e-09 65.9 105 41.0
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 2.7e-09 65.5 105 46.7
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 4.6e-09 64.7 113 37.2
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 6.0e-09 64.3 102 42.2
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 6.0e-09 64.3 102 42.2
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 6.0e-09 64.3 102 42.2
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 6.0e-09 64.3 109 39.4
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 2.3e-08 62.4 97 41.2
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 3.0e-08 62.0 121 34.7
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 3.0e-08 62.0 117 35.9
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 6.6e-08 60.8 116 35.3
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 6.6e-08 60.8 109 37.6
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 8.6e-08 60.5 104 44.2
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 1.5e-07 59.7 100 47.0
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 1.9e-07 59.3 74 50.0
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 1.9e-07 59.3 100 39.0
Eucgr.D01739 Eucalyptus grandis HOM05D007590 ORTHO05D007875 9.5e-07 57.0 76 47.4
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 1.2e-06 56.6 68 48.5
Gohir.A02G100200 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.6e-06 56.2 94 45.7
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 2.1e-06 55.8 117 35.0
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 4.7e-06 54.7 114 35.1
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 6.2e-06 54.3 111 36.0


User provided reference genes

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