Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.0e-196 689.9 346 100.0
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 4.1e-182 641.3 346 91.6
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.1e-179 633.3 346 90.5
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 1.7e-175 619.4 398 80.2
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 7.3e-171 604.0 350 86.6
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 4.7e-170 601.3 347 86.5
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 4.4e-168 594.7 347 84.7
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.2e-166 588.6 351 83.5
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.2e-165 586.6 342 84.8
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.0e-161 571.6 324 85.5
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.4e-159 564.3 349 78.8
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 9.3e-158 560.5 352 78.4
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.1e-157 559.3 352 78.1
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 4.6e-157 558.1 348 78.4
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 3.0e-156 555.4 349 76.8
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 6.7e-156 554.3 348 76.4
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 6.7e-156 554.3 341 78.6
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 1.9e-155 552.7 342 79.8
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 9.6e-155 550.4 347 76.7
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 9.6e-155 550.4 342 79.8
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.6e-154 549.7 338 79.9
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 3.7e-154 548.5 339 77.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.8e-154 548.1 342 79.5
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 1.1e-153 547.0 347 76.7
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 1.4e-153 546.6 350 77.4
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.4e-153 545.8 350 77.1
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.4e-153 545.8 340 77.6
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 4.0e-153 545.0 347 75.8
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 6.9e-153 544.3 344 76.2
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 6.9e-153 544.3 342 77.5
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 9.0e-153 543.9 342 77.8
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 9.0e-153 543.9 342 77.8
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 9.0e-153 543.9 346 77.5
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 9.0e-153 543.9 349 76.5
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.2e-152 543.5 342 77.8
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 4.5e-152 541.6 320 80.3
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 5.8e-152 541.2 344 76.7
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 7.6e-152 540.8 343 76.4
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.7e-151 539.7 357 75.1
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 2.2e-151 539.3 347 74.9
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 2.2e-151 539.3 346 76.6
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 3.8e-151 538.5 344 76.5
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 4.9e-151 538.1 342 76.9
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 6.4e-151 537.7 341 76.0
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 8.4e-151 537.3 345 76.2
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 8.4e-151 537.3 347 75.5
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.4e-150 536.6 333 78.7
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 3.2e-150 535.4 348 76.1
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 4.2e-150 535.0 340 77.4
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 7.1e-150 534.3 342 76.9
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 7.1e-150 534.3 346 73.7
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.6e-149 533.1 343 76.1
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.6e-149 533.1 346 73.4
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 2.1e-149 532.7 343 74.6
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 3.5e-149 531.9 350 73.4
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 4.6e-149 531.6 346 73.7
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 4.6e-149 531.6 342 73.7
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 6.0e-149 531.2 342 76.3
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.0e-149 531.2 351 74.1
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 7.9e-149 530.8 349 74.2
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.0e-148 530.4 335 75.8
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 1.8e-148 529.6 337 75.1
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 5.1e-148 528.1 344 74.4
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 8.7e-148 527.3 319 77.7
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 3.7e-146 521.9 333 75.1
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 6.9e-145 517.7 342 74.0
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 6.9e-145 517.7 334 75.7
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 2.0e-144 516.2 312 78.5
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.6e-144 515.8 341 72.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 5.8e-144 514.6 344 71.2
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.3e-143 513.5 353 75.1
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 7.1e-142 507.7 338 72.2
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 7.1e-142 507.7 342 71.6
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 1.2e-141 506.9 318 74.8
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.6e-141 506.5 342 72.8
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 4.6e-141 505.0 315 77.1
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.9e-140 501.9 377 68.7
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 9.0e-137 490.7 339 69.6
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.0e-136 489.6 332 72.3
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.4e-134 483.4 344 70.1
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 3.6e-133 478.8 347 67.1
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.4e-132 476.9 346 67.9
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 6.3e-130 468.0 328 67.4
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 1.4e-129 466.8 320 69.1
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.4e-129 466.8 263 85.9
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 4.5e-128 461.8 398 64.6
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 8.2e-122 441.0 330 63.6
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.3e-121 438.3 346 64.5
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 7.7e-120 434.5 254 82.3
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.6e-117 426.8 306 66.7
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.5e-110 403.7 343 61.8
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 2.5e-110 402.9 336 62.8
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.0e-108 395.6 346 58.7
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 2.6e-107 392.9 229 81.7
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.1e-105 387.5 366 57.9
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.0e-103 380.9 528 43.6
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 1.0e-103 380.9 222 82.4
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 5.2e-100 368.6 248 72.6
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 8.6e-87 324.7 194 78.9
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 3.2e-81 306.2 337 52.5
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 2.0e-75 287.0 167 79.6
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 4.6e-72 275.8 177 74.0
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.7e-71 273.9 376 39.9
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 6.6e-71 271.9 220 57.3
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.3e-63 247.7 327 43.1
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 6.8e-60 235.3 127 92.1
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.2e-56 224.6 130 80.0
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 2.0e-51 207.2 326 39.9
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.1e-49 201.4 347 36.6
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.0e-47 194.9 126 74.6
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.0e-39 168.3 97 80.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 9.6e-38 161.8 98 73.5
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 2.9e-34 150.2 84 85.7
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 4.2e-25 119.8 83 68.7
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.1e-24 117.5 65 83.1
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.9e-17 94.4 76 59.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.2e-16 91.7 56 82.1
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.1e-09 68.6 37 73.0
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 5.5e-09 66.2 141 31.9
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 1.6e-08 64.7 64 50.0
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 9.7e-06 55.5 30 83.3
Os02g0581500 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 9.7e-06 55.5 279 23.3


User provided reference genes

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