Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 2.9e-106 388.7 210 100.0
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 1.2e-62 243.8 210 66.7
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 1.6e-59 233.4 185 71.9
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 1.8e-55 219.9 185 69.7
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 1.7e-50 203.4 181 65.2
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 4.2e-36 155.6 94 80.9
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 4.3e-33 145.6 173 51.4
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 1.8e-31 140.2 173 50.9
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 4.1e-31 139.0 178 50.0
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 1.1e-25 120.9 103 63.1
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 9.7e-25 117.9 181 45.3
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 1.4e-23 114.0 174 46.0
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 3.1e-23 112.8 125 50.4
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 4.1e-23 112.5 103 57.3
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 5.3e-23 112.1 121 52.9
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 3.4e-22 109.4 110 50.0
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 2.2e-21 106.7 100 54.0
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 2.2e-21 106.7 98 56.1
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 5.0e-21 105.5 114 46.5
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 6.5e-21 105.1 108 51.9
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 1.1e-20 104.4 126 49.2
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 1.1e-20 104.4 121 52.9
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.4e-20 104.0 102 54.9
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 1.9e-20 103.6 108 50.9
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.9e-20 103.6 102 54.9
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.2e-20 102.8 114 47.4
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 3.2e-20 102.8 111 47.7
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 3.2e-20 102.8 98 50.0
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 3.2e-20 102.8 101 52.5
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 5.5e-20 102.1 99 56.6
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 7.2e-20 101.7 97 55.7
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 1.2e-19 100.9 103 50.5
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.6e-19 100.5 114 46.5
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 1.6e-19 100.5 99 50.5
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 1.6e-19 100.5 99 50.5
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 1.6e-19 100.5 102 52.0
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.7e-19 99.8 98 48.0
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 3.6e-19 99.4 106 49.1
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.6e-19 99.4 103 50.5
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 3.6e-19 99.4 99 49.5
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 4.6e-19 99.0 114 49.1
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 4.6e-19 99.0 128 40.6
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 4.6e-19 99.0 102 52.9
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 6.1e-19 98.6 102 51.0
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 6.1e-19 98.6 102 51.0
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 7.9e-19 98.2 126 46.8
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 7.9e-19 98.2 102 49.0
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 7.9e-19 98.2 102 51.0
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 7.9e-19 98.2 102 51.0
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 1.4e-18 97.4 118 49.2
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 1.4e-18 97.4 88 53.4
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.4e-18 97.4 124 45.2
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 1.8e-18 97.1 122 47.5
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 2.3e-18 96.7 102 50.0
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 2.3e-18 96.7 102 50.0
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 2.3e-18 96.7 105 44.8
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 2.3e-18 96.7 113 46.0
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 3.0e-18 96.3 102 47.1
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 3.0e-18 96.3 102 47.1
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 3.0e-18 96.3 102 47.1
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 3.0e-18 96.3 118 47.5
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 3.0e-18 96.3 102 47.1
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 3.0e-18 96.3 135 44.4
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 3.0e-18 96.3 100 49.0
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 3.0e-18 96.3 100 46.0
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 3.9e-18 95.9 94 55.3
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 5.1e-18 95.5 104 51.9
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 5.1e-18 95.5 118 47.5
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 6.7e-18 95.1 118 50.0
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 8.8e-18 94.7 119 47.9
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 8.8e-18 94.7 127 44.1
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 1.1e-17 94.4 93 50.5
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 1.5e-17 94.0 126 40.5
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 1.5e-17 94.0 100 45.0
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 3.3e-17 92.8 108 45.4
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 5.7e-17 92.0 103 47.6
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 5.7e-17 92.0 115 47.0
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 5.7e-17 92.0 100 49.0
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 7.4e-17 91.7 77 49.4
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 7.4e-17 91.7 137 41.6
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 1.7e-16 90.5 106 46.2
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 2.2e-16 90.1 120 42.5
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 3.7e-16 89.4 90 51.1
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 3.7e-16 89.4 120 42.5
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 8.2e-16 88.2 96 49.0
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 8.2e-16 88.2 96 47.9
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 5.3e-15 85.5 88 48.9
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 9.1e-15 84.7 148 36.5
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 1.3e-13 80.9 92 47.8
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 2.2e-13 80.1 73 50.7
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 3.8e-13 79.3 100 47.0
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 3.8e-13 79.3 75 57.3
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 8.5e-13 78.2 139 41.0
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 7.2e-12 75.1 99 45.5
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 2.1e-11 73.6 116 42.2
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 1.5e-09 67.4 147 36.1
ATR0665G366 Amborella trichopoda HOM05D007411 ORTHO05D009025 3.7e-08 62.8 114 37.7
SEGI_32233 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 6.3e-08 62.0 91 39.6
SEGI_16230 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 1.4e-07 60.8 80 42.5
SEGI_37893 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 2.4e-07 60.1 91 39.6
SEGI_40665 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 5.9e-06 55.5 83 36.1


User provided reference genes

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