Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 0.0e+00 1238.8 653 100.0
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 1.9e-300 1035.4 641 86.6
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 9.9e-294 1013.1 651 83.3
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.2e-267 926.4 649 77.3
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.4e-255 885.6 643 74.0
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 6.5e-253 877.5 659 73.4
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 1.4e-250 869.8 641 73.6
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 9.7e-249 863.6 657 73.2
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.5e-241 839.7 643 71.7
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 3.6e-219 765.4 474 85.2
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 8.9e-210 734.2 655 63.4
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 5.7e-209 731.5 654 62.8
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 2.0e-206 723.0 653 62.6
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 2.3e-197 693.0 654 61.0
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 6.6e-197 691.4 645 61.1
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 6.6e-197 691.4 654 59.6
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.9e-196 689.9 645 60.3
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.3e-196 689.1 649 61.0
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.1e-194 684.1 650 60.2
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.4e-194 683.7 649 60.2
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.4e-194 683.7 653 60.0
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 8.9e-194 681.0 647 59.8
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 2.0e-193 679.9 653 59.7
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.6e-190 670.2 664 59.9
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 2.7e-190 669.5 448 80.4
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.3e-189 666.4 664 59.6
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 9.5e-188 661.0 642 59.2
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 2.1e-187 659.8 642 59.2
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 4.7e-187 658.7 650 57.4
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 6.2e-187 658.3 676 57.4
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 2.3e-186 656.4 640 58.6
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.6e-185 652.9 658 58.5
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 7.5e-185 651.4 654 58.3
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 6.4e-184 648.3 650 57.1
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 9.2e-183 644.4 626 59.4
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 5.1e-181 638.6 655 56.3
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 6.6e-181 638.3 639 56.7
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 3.3e-180 636.0 677 54.7
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.1e-179 633.3 672 56.5
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 3.6e-179 632.5 673 55.3
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 3.6e-179 632.5 673 55.3
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 3.4e-177 625.9 627 57.6
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.4e-177 625.5 646 57.4
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 1.3e-176 624.0 644 56.4
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.7e-176 623.6 613 57.7
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 8.4e-176 621.3 709 52.3
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 5.4e-175 618.6 642 56.2
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 9.2e-175 617.8 749 50.2
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 9.6e-172 607.8 636 53.9
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 1.5e-169 600.5 656 54.0
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.3e-168 597.4 524 63.5
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 1.7e-168 597.0 634 53.2
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 4.9e-168 595.5 680 54.4
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 7.1e-167 591.7 635 53.9
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 5.1e-165 585.5 649 55.5
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.1e-164 584.3 611 56.1
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 9.6e-164 581.3 791 47.3
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 1.6e-163 580.5 650 53.1
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 6.2e-163 578.6 645 53.3
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 4.0e-162 575.9 636 52.2
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.2e-161 574.3 650 52.8
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 1.5e-161 573.9 634 53.2
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 4.5e-161 572.4 648 52.3
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 9.9e-161 571.2 598 56.4
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 9.9e-161 571.2 648 52.2
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 2.7e-158 563.1 644 51.4
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 5.1e-157 558.9 688 49.4
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 8.7e-157 558.1 670 50.0
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.9e-156 557.0 673 50.2
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 2.8e-155 553.1 671 49.9
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.2e-153 547.7 671 49.5
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.7e-152 543.9 637 51.3
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.7e-152 543.9 668 50.7
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 2.2e-152 543.5 697 48.6
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.1e-151 541.2 658 50.8
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 6.0e-150 535.4 623 52.8
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 7.9e-150 535.0 695 47.8
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.0e-149 534.6 647 50.1
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 2.5e-148 530.0 523 57.2
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 5.6e-148 528.9 657 50.7
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 9.0e-146 521.5 656 47.6
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 4.3e-140 502.7 447 62.9
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 9.0e-138 495.0 631 48.2
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 5.5e-135 485.7 646 46.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.5e-129 467.6 597 48.9
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.7e-128 464.2 422 62.6
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 6.1e-126 455.7 659 44.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.7e-118 429.5 712 39.9
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 5.2e-117 426.0 476 52.9
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 4.4e-116 422.9 642 46.0
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.3e-115 421.4 638 43.6
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 8.2e-115 418.7 656 41.6
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 1.3e-112 411.4 527 48.2
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 6.1e-110 402.5 671 40.2
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 5.2e-109 399.4 641 40.6
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 7.7e-105 385.6 493 47.1
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 5.5e-103 379.4 654 39.3
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.6e-102 377.9 502 48.8
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 4.0e-101 373.2 638 39.5
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 9.5e-95 352.1 455 47.9
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.4e-90 338.2 419 49.9
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.5e-79 300.8 833 31.7
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.7e-73 280.8 215 69.8
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 5.2e-69 266.5 501 36.3
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.0e-64 250.8 325 52.3
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 6.8e-61 239.6 165 77.0
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 1.4e-58 231.9 332 49.7
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 3.5e-57 227.3 320 46.2
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 4.6e-57 226.9 202 61.9
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 6.0e-57 226.5 806 28.0
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 8.1e-54 216.1 265 54.0
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 2.2e-51 208.0 741 28.2
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.4e-50 205.3 144 75.7
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.1e-49 201.4 153 69.9
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 5.8e-44 183.3 220 48.2
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.2e-35 154.8 192 47.4
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.3e-27 129.0 177 41.2
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.9e-26 125.2 101 67.3
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.9e-23 115.2 94 71.3
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.7e-23 113.6 103 64.1
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.8e-22 111.3 90 74.4
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 3.1e-21 107.8 72 73.6
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 8.5e-11 73.2 47 72.3
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.5e-10 71.6 117 40.2
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 4.2e-10 70.9 47 74.5
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-08 66.2 126 41.3
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 2.3e-08 65.1 81 44.4
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.0e-08 64.7 93 38.7
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 1.1e-07 62.8 41 80.5
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.5e-07 62.4 50 68.0


User provided reference genes

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