Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24352_v3 Cicer arietinum L. HOM05D005641 ORTHO05D007953 2.3e-78 295.4 144 100.0
Medtr5g005150 Medicago truncatula HOM05D005641 ORTHO05D007953 9.5e-40 167.2 84 88.1
Lj1g0011960 Lotus japonicus HOM05D005641 ORTHO05D007953 3.6e-39 165.2 88 81.8
TPR.G8292 Trifolium pratense HOM05D005641 ORTHO05D007953 6.2e-39 164.5 84 84.5
Atru.chr5.2402 Acer truncatum HOM05D005641 ORTHO05D007953 2.6e-37 159.1 95 73.7
CiPaw.06G166900 Carya illinoinensis HOM05D005641 ORTHO05D007953 9.9e-37 157.1 83 80.7
Phvul.002G052300 Phaseolus vulgaris HOM05D005641 ORTHO05D007953 1.3e-36 156.8 89 76.4
Lsat_1_v5_gn_9_112460 Lactuca sativa HOM05D005641 ORTHO05D007953 4.9e-36 154.8 93 72.0
Ciclev10029502m.g Citrus clementina HOM05D005641 ORTHO05D007953 1.9e-35 152.9 91 73.6
DCAR_029115 Daucus carota HOM05D005641 ORTHO05D007953 3.2e-35 152.1 81 81.5
Prupe.8G141700 Prunus persica HOM05D005641 ORTHO05D007953 3.2e-35 152.1 80 82.5
QL02p069388 Quercus lobata HOM05D005641 ORTHO05D007953 3.2e-35 152.1 80 81.2
arahy.Tifrunner.gnm1.ann1.GRNJ5W Arachis hypogaea HOM05D005641 ORTHO05D007953 4.1e-35 151.8 81 81.5
Dinv42223 Davidia involucrata HOM05D005641 ORTHO05D007953 4.1e-35 151.8 95 70.5
Duzib052G0024 Durio zibethinus HOM05D005641 ORTHO05D007953 4.1e-35 151.8 96 67.7
PGR042G1829 Punica granatum HOM05D005641 ORTHO05D007953 4.1e-35 151.8 92 71.7
RcHm_v2.0_Chr6g0253411 Rosa chinensis HOM05D005641 ORTHO05D007953 4.1e-35 151.8 81 80.2
Sabra09G0069700 Salix brachista HOM05D005641 ORTHO05D007953 7.1e-35 151.0 95 72.6
Thecc.02G114700 Theobroma cacao HOM05D005641 ORTHO05D007953 7.1e-35 151.0 95 68.4
Manes.10G080400 Manihot esculenta HOM05D005641 ORTHO05D007953 9.2e-35 150.6 87 74.7
Cfa004645 Carpinus fangiana HOM05D005641 ORTHO05D007953 1.2e-34 150.2 80 80.0
Haze_10242 Corylus avellana HOM05D005641 ORTHO05D007953 1.2e-34 150.2 80 80.0
Nitab4.5_0012285g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 1.2e-34 150.2 95 69.5
Sopen10g020870 Solanum pennellii HOM05D005641 ORTHO05D007953 2.7e-34 149.1 95 70.5
PGSC0003DMG400005454 Solanum tuberosum HOM05D005641 ORTHO05D007953 2.7e-34 149.1 95 69.5
Glyma.01G243000 Glycine max HOM05D005641 ORTHO05D007953 3.5e-34 148.7 83 78.3
Nn1g04606 Nelumbo nucifera HOM05D005641 ORTHO05D007953 3.5e-34 148.7 94 67.0
COL.COLO4_32537 Corchorus olitorius HOM05D005641 ORTHO05D007953 4.6e-34 148.3 85 71.8
Gohir.D02G205400 Gossypium hirsutum HOM05D005641 ORTHO05D007953 6.0e-34 147.9 80 77.5
Gorai.005G232800 Gossypium raimondii HOM05D005641 ORTHO05D007953 6.0e-34 147.9 80 77.5
MD05G1097100 Malus domestica HOM05D005641 ORTHO05D007953 6.0e-34 147.9 80 78.8
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 6.0e-34 147.9 80 78.8
Cpa.g.sc106.73 Carica papaya HOM05D005641 ORTHO05D007953 7.8e-34 147.5 85 75.3
Solyc10g049650.3 Solanum lycopersicum HOM05D005641 ORTHO05D007953 7.8e-34 147.5 95 69.5
Eucgr.G01263 Eucalyptus grandis HOM05D005641 ORTHO05D007953 1.0e-33 147.1 81 76.5
Ciclev10028542m.g Citrus clementina HOM05D005641 ORTHO05D007953 1.3e-33 146.7 92 68.5
Sed0000346 Sechium edule HOM05D005641 ORTHO05D007953 1.3e-33 146.7 81 77.8
A09p10560 Brassica napus HOM05D005641 ORTHO05D007953 1.7e-33 146.4 81 79.0
FvH4_2g04060 Fragaria vesca HOM05D005641 ORTHO05D007953 1.7e-33 146.4 81 76.5
Gohir.A03G183900 Gossypium hirsutum HOM05D005641 ORTHO05D007953 1.7e-33 146.4 80 76.2
MSTRG.5328 Avicennia marina HOM05D005641 ORTHO05D007953 2.3e-33 146.0 96 65.6
FAN15G3008 Fragaria x ananassa HOM05D005641 ORTHO05D007953 2.3e-33 146.0 81 76.5
FAN24G2036 Fragaria x ananassa HOM05D005641 ORTHO05D007953 2.3e-33 146.0 80 77.5
Oeu037265.1 Olea europaea HOM05D005641 ORTHO05D007953 2.3e-33 146.0 81 75.3
AL3G46570 Arabidopsis lyrata HOM05D005641 ORTHO05D007953 3.0e-33 145.6 81 76.5
AT2G14825 Arabidopsis thaliana HOM05D005641 ORTHO05D007953 3.0e-33 145.6 81 76.5
Carub.0003s2882 Capsella rubella HOM05D005641 ORTHO05D007953 3.0e-33 145.6 81 76.5
Ah.09g231980 Amaranthus hybridus HOM05D005641 ORTHO05D007953 3.9e-33 145.2 83 72.3
CANSAT25G1977 Cannabis sativa HOM05D005641 ORTHO05D007953 3.9e-33 145.2 80 76.2
CARHR284800 Cardamine hirsuta HOM05D005641 ORTHO05D007953 3.9e-33 145.2 81 76.5
ECA240G0483 Erigeron canadensis HOM05D005641 ORTHO05D007953 3.9e-33 145.2 95 66.3
FAN20G2714 Fragaria x ananassa HOM05D005641 ORTHO05D007953 3.9e-33 145.2 81 75.3
Sp3g28020 Schrenkiella parvula HOM05D005641 ORTHO05D007953 3.9e-33 145.2 81 75.3
TWI14G0306 Tripterygium wilfordii HOM05D005641 ORTHO05D007953 3.9e-33 145.2 96 66.7
CAN.G1.68 Capsicum annuum HOM05D005641 ORTHO05D007953 5.1e-33 144.8 83 74.7
Thhalv10022899m.g Eutrema salsugineum HOM05D005641 ORTHO05D007953 5.1e-33 144.8 81 76.5
SalBow3G4250 Salvia bowleyana HOM05D005641 ORTHO05D007953 5.1e-33 144.8 96 65.6
Rhsim05G0090100 Rhododendron simsii HOM05D005641 ORTHO05D007953 6.6e-33 144.4 82 76.8
BcaC04g23064 Brassica carinata HOM05D005641 ORTHO05D007953 8.6e-33 144.1 81 76.5
BolC9t54144H Brassica oleracea HOM05D005641 ORTHO05D007953 8.6e-33 144.1 81 76.5
MELO3C017992.2 Cucumis melo HOM05D005641 ORTHO05D007953 8.6e-33 144.1 80 76.2
GSVIVG01037858001 Vitis vinifera HOM05D005641 ORTHO05D007953 8.6e-33 144.1 96 66.7
Migut.O00678 Erythranthe guttata HOM05D005641 ORTHO05D007953 1.1e-32 143.7 80 75.0
Potri.009G090100 Populus trichocarpa HOM05D005641 ORTHO05D007953 1.1e-32 143.7 80 73.8
BraA09t36698Z Brassica rapa HOM05D005641 ORTHO05D007953 1.5e-32 143.3 81 76.5
CSS0033790 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 1.5e-32 143.3 95 65.3
Cc02_g19690 Coffea canephora HOM05D005641 ORTHO05D007953 1.5e-32 143.3 96 68.8
Hma1.2p1_1023F.1_g248880 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 1.5e-32 143.3 81 74.1
Aqoxy6G02714 Aquilegia oxysepala HOM05D005641 ORTHO05D007953 1.9e-32 142.9 80 73.8
CsaV3_4G000430 Cucumis sativus L. HOM05D005641 ORTHO05D007953 1.9e-32 142.9 80 75.0
Aa31LG8G12890 Aethionema arabicum HOM05D005641 ORTHO05D007953 2.5e-32 142.5 80 75.0
Sc14g0002550 Simmondsia chinensis HOM05D005641 ORTHO05D007953 2.5e-32 142.5 82 75.6
C09p12490 Brassica napus HOM05D005641 ORTHO05D007953 3.3e-32 142.1 81 75.3
SGA_v2.0_scaffold337G49200 Striga asiatica HOM05D005641 ORTHO05D007953 3.3e-32 142.1 84 72.6
Migut.N01150 Erythranthe guttata HOM05D005641 ORTHO05D007953 4.3e-32 141.7 80 72.5
Eucgr.G01266 Eucalyptus grandis HOM05D005641 ORTHO05D007953 4.3e-32 141.7 81 71.6
vmacro19527 Vaccinium macrocarpon HOM05D005641 ORTHO05D007953 9.5e-32 140.6 82 74.4
VMungo1215G0158 Vigna mungo HOM05D005641 ORTHO05D007953 9.5e-32 140.6 121 57.0
CSS0039741 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 2.1e-31 139.4 95 63.2
HanXRQChr03g0069981 Helianthus annuus HOM05D005641 ORTHO05D007953 2.8e-31 139.0 80 73.8
Nitab4.5_0001259g0120 Nicotiana tabacum HOM05D005641 ORTHO05D007953 3.6e-31 138.7 78 74.4
PSO541G1794 Papaver somniferum HOM05D005641 ORTHO05D007953 3.6e-31 138.7 92 65.2
Peaxi162Scf00083g00163 Petunia axillaris HOM05D005641 ORTHO05D007953 3.6e-31 138.7 95 64.2
Os12g0508266 Oryza sativa ssp. japonica HOM05D005641 ORTHO05D007953 4.7e-31 138.3 80 68.8
PSO675G2895 Papaver somniferum HOM05D005641 ORTHO05D007953 4.7e-31 138.3 92 66.3
THA.LOC104819534 Tarenaya hassleriana HOM05D005641 ORTHO05D007953 4.7e-31 138.3 81 72.8
EL10Ac8g19366 Beta vulgaris HOM05D005641 ORTHO05D007953 6.2e-31 137.9 83 68.7
AUR62022504 Chenopodium quinoa HOM05D005641 ORTHO05D007953 6.2e-31 137.9 83 67.5
AUR62031337 Chenopodium quinoa HOM05D005641 ORTHO05D007953 6.2e-31 137.9 83 67.5
SEGI_20221 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 1.4e-30 136.7 80 70.0
SEGI_25796 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 1.4e-30 136.7 80 70.0
Zm00001eb137960 Zea mays HOM05D005641 ORTHO05D007953 1.8e-30 136.3 94 61.7
CDE06G0500 Ceratophyllum demersum HOM05D005641 ORTHO05D007953 2.4e-30 136.0 81 65.4
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 2.4e-30 136.0 75 73.3
PGR042G3728 Punica granatum HOM05D005641 ORTHO05D007953 3.1e-30 135.6 77 74.0
Hund12610 Selenicereus undatus HOM05D005641 ORTHO05D007953 3.1e-30 135.6 81 70.4
unitig_744.g24456 Utricularia gibba HOM05D005641 ORTHO05D007953 5.2e-30 134.8 95 63.2
FAN27G3103 Fragaria x ananassa HOM05D005641 ORTHO05D007953 8.9e-30 134.0 81 72.8
Psat4g227920 Pisum sativum HOM05D005641 ORTHO05D007953 1.2e-29 133.7 83 74.7
HPP92_020459 Vanilla planifolia HOM05D005641 ORTHO05D007953 8.4e-28 127.5 80 66.2
HPP92_026175 Vanilla planifolia HOM05D005641 ORTHO05D007953 1.9e-27 126.3 80 66.2
Pp3c6_20250 Physcomitrium patens HOM05D005641 ORTHO05D007953 4.1e-27 125.2 88 60.2
Actinidia27984 Actinidia chinensis HOM05D005641 ORTHO05D007953 1.6e-26 123.2 83 67.5
Hma1.2p1_1023F.1_g248900 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 7.8e-26 120.9 74 70.3
SMO119G0506 Selaginella moellendorffii HOM05D005641 ORTHO05D007953 1.7e-25 119.8 81 61.7
Hma1.2p1_1023F.1_g248890 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 8.1e-23 110.9 76 67.1
arahy.Tifrunner.gnm1.ann1.C5GEYC Arachis hypogaea HOM05D005641 ORTHO05D007953 4.0e-22 108.6 62 79.0
RcHm_v2.0_Chr6g0253251 Rosa chinensis HOM05D005641 ORTHO05D007953 7.1e-19 97.8 65 56.9
CBR_g32245 Chara braunii HOM05D005641 ORTHO05D007953 4.6e-18 95.1 79 46.8
Lj9A326T80 Lonicera japonica HOM05D005641 ORTHO05D007953 4.6e-18 95.1 70 64.3
RcHm_v2.0_Chr6g0253401 Rosa chinensis HOM05D005641 ORTHO05D035713 4.3e-16 88.6 64 56.2
FvH4_2g04050 Fragaria vesca HOM05D005641 ORTHO05D035713 2.1e-15 86.3 64 54.7
RcHm_v2.0_Chr6g0253291 Rosa chinensis HOM05D005641 ORTHO05D007953 9.0e-14 80.9 63 47.6
RcHm_v2.0_Chr6g0253371 Rosa chinensis HOM05D001615 ORTHO05D001493 2.6e-13 79.3 63 54.0
Lalb_Chr16g0376281 Lupinus albus HOM05D005641 ORTHO05D007953 2.9e-12 75.9 56 60.7
ClCG10G010510 Citrullus lanatus HOM05D005641 ORTHO05D007953 3.8e-12 75.5 38 89.5
RcHm_v2.0_Chr6g0253341 Rosa chinensis HOM05D005641 ORTHO05D007953 8.4e-12 74.3 67 41.8
Lj9A326T79 Lonicera japonica HOM05D005641 ORTHO05D007953 1.1e-11 73.9 42 64.3
Prupe.8G141500 Prunus persica HOM05D005641 ORTHO05D007953 1.9e-11 73.2 54 46.3
RcHm_v2.0_Chr6g0253261 Rosa chinensis HOM05D005641 ORTHO05D007953 3.2e-11 72.4 65 49.2
Peaxi162Scf00003g02633 Petunia axillaris HOM05D005641 ORTHO05D007953 4.2e-11 72.0 54 64.8
FAN24G2128 Fragaria x ananassa HOM05D005641 ORTHO05D208318 1.0e-09 67.4 64 46.9
Zm00001eb264710 Zea mays HOM05D005641 ORTHO05D007953 3.3e-08 62.4 39 66.7
Cfa004644 Carpinus fangiana HOM05D005641 ORTHO05D002074 2.4e-06 56.2 39 64.1


User provided reference genes

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