Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24350_v3 Cicer arietinum L. HOM05D006153 ORTHO05D007701 1.5e-45 185.7 85 100.0
Psat4g228040 Pisum sativum HOM05D006153 ORTHO05D007701 4.5e-21 104.4 97 53.6
TPR.G8325 Trifolium pratense HOM05D006153 ORTHO05D007701 1.7e-20 102.4 96 56.2
Medtr5g005180 Medicago truncatula HOM05D006153 ORTHO05D007701 9.3e-19 96.7 98 50.0
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 1.8e-17 92.4 86 50.0
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 2.4e-14 82.0 94 47.9
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 9.0e-14 80.1 96 44.8
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 9.0e-14 80.1 96 45.8
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 3.4e-13 78.2 71 52.1
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 4.5e-13 77.8 59 59.3
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 7.7e-13 77.0 99 45.5
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 1.7e-12 75.9 97 45.4
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.2e-12 75.5 71 47.9
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 2.9e-12 75.1 93 45.2
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 3.8e-12 74.7 99 42.4
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 6.5e-12 73.9 87 44.8
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 8.5e-12 73.6 64 46.9
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 1.1e-11 73.2 41 70.7
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 1.1e-11 73.2 53 54.7
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 1.4e-11 72.8 62 50.0
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 1.4e-11 72.8 67 50.7
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 1.9e-11 72.4 71 46.5
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 3.2e-11 71.6 55 52.7
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 3.2e-11 71.6 41 63.4
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 5.5e-11 70.9 62 48.4
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 7.2e-11 70.5 57 54.4
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 9.4e-11 70.1 41 61.0
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 1.2e-10 69.7 43 58.1
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 1.2e-10 69.7 42 64.3
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 1.6e-10 69.3 56 53.6
ECA234G4313 Erigeron canadensis HOM05D006153 ORTHO05D007701 1.6e-10 69.3 40 72.5
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 2.1e-10 68.9 43 60.5
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.1e-10 68.9 64 42.2
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 2.1e-10 68.9 64 42.2
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 2.1e-10 68.9 76 42.1
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 2.7e-10 68.6 51 56.9
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 2.7e-10 68.6 60 50.0
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 2.7e-10 68.6 48 56.2
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 4.6e-10 67.8 42 64.3
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 4.6e-10 67.8 37 73.0
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 4.6e-10 67.8 66 48.5
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 4.6e-10 67.8 92 38.0
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 4.6e-10 67.8 60 51.7
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 4.6e-10 67.8 69 44.9
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 6.1e-10 67.4 38 65.8
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 1.0e-09 66.6 80 38.8
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 1.4e-09 66.2 98 40.8
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 1.4e-09 66.2 62 48.4
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 2.3e-09 65.5 47 53.2
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 2.3e-09 65.5 58 51.7
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 2.3e-09 65.5 52 50.0
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 2.3e-09 65.5 46 58.7
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 3.0e-09 65.1 98 37.8
HanXRQChr16g0514901 Helianthus annuus HOM05D006153 ORTHO05D007701 3.0e-09 65.1 41 63.4
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 3.0e-09 65.1 57 52.6
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 3.9e-09 64.7 38 63.2
Cfa004655 Carpinus fangiana HOM05D006153 ORTHO05D007701 6.7e-09 63.9 42 59.5
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 6.7e-09 63.9 42 57.1
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 6.7e-09 63.9 77 37.7
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 6.7e-09 63.9 42 64.3
Gohir.A13G045400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 8.8e-09 63.5 61 42.6
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 8.8e-09 63.5 73 37.0
Zm00001eb264740 Zea mays HOM05D006153 ORTHO05D007701 8.8e-09 63.5 76 36.8
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 1.1e-08 63.2 38 68.4
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 1.1e-08 63.2 38 68.4
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 1.1e-08 63.2 38 68.4
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 1.1e-08 63.2 38 68.4
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 1.1e-08 63.2 38 68.4
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 1.1e-08 63.2 82 40.2
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 1.1e-08 63.2 76 39.5
HanXRQChr13g0425861 Helianthus annuus HOM05D006153 ORTHO05D007701 1.5e-08 62.8 41 61.0
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.5e-08 62.8 64 42.2
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 1.9e-08 62.4 42 61.9
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 1.9e-08 62.4 40 65.0
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 1.9e-08 62.4 59 47.5
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 1.9e-08 62.4 32 68.8
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 2.5e-08 62.0 38 63.2
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 3.3e-08 61.6 47 51.1
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 3.3e-08 61.6 37 62.2
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 3.3e-08 61.6 61 42.6
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 4.3e-08 61.2 38 63.2
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 4.3e-08 61.2 38 63.2
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 4.3e-08 61.2 101 33.7
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 4.3e-08 61.2 42 61.9
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 4.3e-08 61.2 61 42.6
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 5.7e-08 60.8 95 38.9
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 5.7e-08 60.8 42 52.4
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 7.4e-08 60.5 37 62.2
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 7.4e-08 60.5 93 38.7
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 9.7e-08 60.1 41 61.0
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 9.7e-08 60.1 38 55.3
ECA234G3366 Erigeron canadensis HOM05D006153 ORTHO05D007701 1.3e-07 59.7 42 61.9
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 2.2e-07 58.9 37 62.2
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 2.2e-07 58.9 88 35.2
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 2.2e-07 58.9 42 57.1
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 3.7e-07 58.2 40 55.0
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 3.7e-07 58.2 51 49.0
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 3.7e-07 58.2 98 34.7
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 4.8e-07 57.8 50 48.0
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 4.8e-07 57.8 66 37.9
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 6.3e-07 57.4 94 33.0
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 6.3e-07 57.4 66 36.4
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 6.3e-07 57.4 38 57.9
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 8.2e-07 57.0 97 35.1
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 8.2e-07 57.0 38 57.9
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 8.2e-07 57.0 48 50.0
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 1.1e-06 56.6 74 37.8
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 1.1e-06 56.6 74 37.8
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 1.1e-06 56.6 32 59.4
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 1.8e-06 55.8 42 50.0
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 1.8e-06 55.8 28 67.9
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.4e-06 55.5 29 65.5
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 3.1e-06 55.1 47 53.2
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 3.1e-06 55.1 37 54.1
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 4.1e-06 54.7 38 55.3
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 4.1e-06 54.7 38 55.3
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 5.3e-06 54.3 39 56.4
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 5.3e-06 54.3 102 35.3
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 5.3e-06 54.3 39 56.4
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 6.9e-06 53.9 41 56.1
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 6.9e-06 53.9 41 56.1
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 9.1e-06 53.5 65 40.0


User provided reference genes

Program Settings