Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24341_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 1.3e-159 566.6 355 100.0
Ca_09585_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 1.3e-74 284.3 247 63.6
Ca_09587_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 3.8e-74 282.7 187 78.1
TPR.G2735 Trifolium pratense HOM05D005973 ORTHO05D007285 8.5e-74 281.6 286 56.3
Ca_25879_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 1.6e-72 277.3 261 59.4
Psat7g241480 Pisum sativum HOM05D005973 ORTHO05D007285 4.0e-71 272.7 285 55.1
Medtr3g023180 Medicago truncatula HOM05D005973 ORTHO05D007285 9.1e-68 261.5 282 54.3
Lj3g0002161 Lotus japonicus HOM05D005973 ORTHO05D007285 7.2e-65 251.9 282 51.4
Ca_24344_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 2.1e-64 250.4 155 80.0
Lalb_Chr25g0282721 Lupinus albus HOM05D005973 ORTHO05D007285 1.8e-63 247.3 282 50.7
Phvul.005G033500 Phaseolus vulgaris HOM05D005973 ORTHO05D007285 4.4e-62 242.7 286 49.7
COL.COLO4_19343 Corchorus olitorius HOM05D005973 ORTHO05D007285 8.3e-53 211.8 289 42.2
GSVIVG01000864001 Vitis vinifera HOM05D005973 ORTHO05D007285 2.0e-51 207.2 291 43.0
QL05p089319 Quercus lobata HOM05D005973 ORTHO05D007285 4.6e-51 206.1 291 43.6
SGA_v2.0_scaffold354G49737 Striga asiatica HOM05D005973 ORTHO05D007285 1.0e-50 204.9 268 44.4
arahy.Tifrunner.gnm1.ann1.9Z0TAG Arachis hypogaea HOM05D005973 ORTHO05D007285 1.3e-50 204.5 242 50.0
Dinv32060 Davidia involucrata HOM05D005973 ORTHO05D007285 1.3e-50 204.5 286 41.3
arahy.Tifrunner.gnm1.ann1.P50PF0 Arachis hypogaea HOM05D005973 ORTHO05D007285 2.3e-50 203.8 268 46.3
Atru.BG.296.p Acer truncatum HOM05D005973 ORTHO05D007285 3.0e-50 203.4 287 41.1
Gorai.010G192200 Gossypium raimondii HOM05D005973 ORTHO05D007285 1.1e-49 201.4 290 42.1
Duzib106G0003 Durio zibethinus HOM05D005973 ORTHO05D007285 5.6e-49 199.1 169 58.6
Gohir.D06G164800 Gossypium hirsutum HOM05D005973 ORTHO05D007285 2.1e-48 197.2 290 41.0
MD07G1026900 Malus domestica HOM05D005973 ORTHO05D007285 6.2e-48 195.7 265 43.4
Prupe.2G027000 Prunus persica HOM05D005973 ORTHO05D007285 8.1e-48 195.3 155 60.6
Cfa002200 Carpinus fangiana HOM05D005973 ORTHO05D007285 3.1e-47 193.4 163 60.1
Gohir.A06G158900 Gossypium hirsutum HOM05D005973 ORTHO05D007285 3.1e-47 193.4 293 41.0
RcHm_v2.0_Chr1g0319391 Rosa chinensis HOM05D005973 ORTHO05D007285 3.1e-47 193.4 155 60.6
Ciclev10030824m.g Citrus clementina HOM05D005973 ORTHO05D007285 4.0e-47 193.0 155 60.0
Manes.05G118900 Manihot esculenta HOM05D005973 ORTHO05D007285 6.8e-47 192.2 155 60.6
QL09p040247 Quercus lobata HOM05D005973 ORTHO05D007285 6.8e-47 192.2 269 43.5
Oeu027349.1 Olea europaea HOM05D005973 ORTHO05D007285 8.9e-47 191.8 287 38.7
Thecc.10G003600 Theobroma cacao HOM05D005973 ORTHO05D007285 8.9e-47 191.8 169 56.8
Rhsim05G0126600 Rhododendron simsii HOM05D005973 ORTHO05D007285 2.0e-46 190.7 134 64.9
CiPaw.04G079400 Carya illinoinensis HOM05D005973 ORTHO05D007285 5.8e-46 189.1 155 60.0
Dinv05038 Davidia involucrata HOM05D005973 ORTHO05D007285 9.8e-46 188.3 287 39.0
Eucgr.C02463 Eucalyptus grandis HOM05D005973 ORTHO05D007285 1.3e-45 188.0 269 41.3
FAN10G2343 Fragaria x ananassa HOM05D005973 ORTHO05D007285 1.3e-45 188.0 178 53.9
PGR031G1457 Punica granatum HOM05D005973 ORTHO05D007285 1.7e-45 187.6 269 39.4
FvH4_7g02120 Fragaria vesca HOM05D005973 ORTHO05D007285 2.9e-45 186.8 137 65.0
FAN06G2970 Fragaria x ananassa HOM05D005973 ORTHO05D007285 2.9e-45 186.8 137 65.0
Dinv03571 Davidia involucrata HOM05D005973 ORTHO05D007285 3.7e-45 186.4 269 40.1
Nitab4.5_0001775g0060 Nicotiana tabacum HOM05D005973 ORTHO05D007285 6.4e-45 185.7 158 57.6
Peaxi162Scf00087g00126 Petunia axillaris HOM05D005973 ORTHO05D007285 6.4e-45 185.7 158 57.6
FAN03G2603 Fragaria x ananassa HOM05D005973 ORTHO05D007285 8.3e-45 185.3 178 53.4
Sabra03G0150000 Salix brachista HOM05D005973 ORTHO05D007285 8.3e-45 185.3 159 58.5
TAR623G1116 Trochodendron aralioides HOM05D005973 ORTHO05D007285 8.3e-45 185.3 130 66.2
TAR623G1644 Trochodendron aralioides HOM05D005973 ORTHO05D007285 1.1e-44 184.9 276 40.6
Nitab4.5_0000316g0260 Nicotiana tabacum HOM05D005973 ORTHO05D007285 1.4e-44 184.5 158 57.0
Potri.003G203100 Populus trichocarpa HOM05D005973 ORTHO05D007285 1.9e-44 184.1 268 42.2
Lj7A578T58 Lonicera japonica HOM05D005973 ORTHO05D007285 2.4e-44 183.7 152 56.6
Migut.N01822 Erythranthe guttata HOM05D005973 ORTHO05D007285 3.2e-44 183.3 287 36.2
CAN.G410.36 Capsicum annuum HOM05D005973 ORTHO05D007285 9.2e-44 181.8 136 63.2
QL10p041196 Quercus lobata HOM05D005973 ORTHO05D007285 1.2e-43 181.4 256 43.8
TAR623G1146 Trochodendron aralioides HOM05D005973 ORTHO05D007285 2.1e-43 180.6 134 64.2
PSO339G1208 Papaver somniferum HOM05D005973 ORTHO05D007285 2.7e-43 180.3 171 56.1
VMungo1080G0196 Vigna mungo HOM05D005973 ORTHO05D007285 2.7e-43 180.3 273 42.1
SalBow6G5404 Salvia bowleyana HOM05D005973 ORTHO05D007285 3.5e-43 179.9 291 37.5
Hma1.2p1_0579F.1_g182710 Hydrangea macrophylla HOM05D005973 ORTHO05D007285 6.0e-43 179.1 139 61.9
Hma1.2p1_0579F.1_g182720 Hydrangea macrophylla HOM05D005973 ORTHO05D007285 6.0e-43 179.1 139 61.9
Solyc01g068180.3 Solanum lycopersicum HOM05D005973 ORTHO05D007285 6.0e-43 179.1 145 57.9
CANSAT80G0799 Cannabis sativa HOM05D005973 ORTHO05D007285 7.8e-43 178.7 290 38.3
Sopen01g030120 Solanum pennellii HOM05D005973 ORTHO05D007285 7.8e-43 178.7 145 57.9
DCAR_025034 Daucus carota HOM05D005973 ORTHO05D007285 1.0e-42 178.3 287 36.9
Eucgr.C02304 Eucalyptus grandis HOM05D005973 ORTHO05D007285 1.0e-42 178.3 257 41.6
Nn3g17081 Nelumbo nucifera HOM05D005973 ORTHO05D007285 1.3e-42 177.9 388 45.6
PSO384G2338 Papaver somniferum HOM05D005973 ORTHO05D007285 2.3e-42 177.2 284 39.4
SHI03956 Sapria himalayana HOM05D005973 ORTHO05D007285 3.9e-42 176.4 156 55.8
Glyma.20G097200 Glycine max HOM05D005973 ORTHO05D007285 6.6e-42 175.6 261 42.1
Eucgr.J01726 Eucalyptus grandis HOM05D005973 ORTHO05D007285 8.6e-42 175.3 269 39.4
Thhalv10024515m.g Eutrema salsugineum HOM05D005973 ORTHO05D007285 2.5e-41 173.7 292 36.3
Glyma.06G236700 Glycine max HOM05D005973 ORTHO05D007285 4.3e-41 172.9 261 41.4
Glyma.20G115000 Glycine max HOM05D005973 ORTHO05D007285 4.3e-41 172.9 264 41.7
Cc09_g07760 Coffea canephora HOM05D005973 ORTHO05D007285 5.6e-41 172.6 159 54.1
Carub.0007s2070 Capsella rubella HOM05D005973 ORTHO05D007285 9.5e-41 171.8 204 44.1
ECA248G3068 Erigeron canadensis HOM05D005973 ORTHO05D007285 9.5e-41 171.8 291 35.7
Aqoxy2G00263 Aquilegia oxysepala HOM05D005973 ORTHO05D007285 4.7e-40 169.5 290 37.6
TAR623G1677 Trochodendron aralioides HOM05D005973 ORTHO05D007285 4.7e-40 169.5 270 39.6
ATR0820G217 Amborella trichopoda HOM05D005973 ORTHO05D007285 6.2e-40 169.1 291 36.4
CSS0008088 Camellia sinensis var. sinensis HOM05D005973 ORTHO05D007285 8.1e-40 168.7 279 36.2
AT4G20740 Arabidopsis thaliana HOM05D005973 ORTHO05D007285 1.4e-39 167.9 204 44.6
Aa31LG6G2840 Aethionema arabicum HOM05D005973 ORTHO05D007285 1.8e-39 167.5 269 37.2
THA.LOC104812083 Tarenaya hassleriana HOM05D005973 ORTHO05D007285 3.1e-39 166.8 160 53.1
Hund13321 Selenicereus undatus HOM05D005973 ORTHO05D007285 4.0e-39 166.4 155 51.0
Ah.10g030910 Amaranthus hybridus HOM05D005973 ORTHO05D007285 6.8e-39 165.6 176 47.7
CARHR227290 Cardamine hirsuta HOM05D005973 ORTHO05D007285 6.8e-39 165.6 292 34.6
MSTRG.27162 Avicennia marina HOM05D005973 ORTHO05D007285 8.9e-39 165.2 151 50.3
vmacro19755 Vaccinium macrocarpon HOM05D005973 ORTHO05D007285 2.0e-38 164.1 250 39.2
AUR62026807 Chenopodium quinoa HOM05D005973 ORTHO05D007285 3.4e-38 163.3 159 48.4
Nn3g17082 Nelumbo nucifera HOM05D005973 ORTHO05D007285 5.8e-38 162.5 273 38.5
Sp7g18820 Schrenkiella parvula HOM05D005973 ORTHO05D007285 7.6e-38 162.2 292 34.2
AL7G33400 Arabidopsis lyrata HOM05D005973 ORTHO05D007285 1.3e-37 161.4 292 34.9
BcaNung04156 Brassica carinata HOM05D005973 ORTHO05D007285 1.3e-37 161.4 293 34.8
Aa31LG9G8720 Aethionema arabicum HOM05D005973 ORTHO05D007285 1.7e-37 161.0 172 46.5
Oeu006490.1 Olea europaea HOM05D005973 ORTHO05D007285 1.7e-37 161.0 136 58.1
EL10Ac2g02881 Beta vulgaris HOM05D005973 ORTHO05D007285 3.7e-37 159.8 213 41.3
AUR62037245 Chenopodium quinoa HOM05D005973 ORTHO05D007285 8.3e-37 158.7 159 48.4
A01p12160 Brassica napus HOM05D005973 ORTHO05D007285 1.1e-36 158.3 269 34.6
ClCG01G007570 Citrullus lanatus HOM05D005973 ORTHO05D007285 1.4e-36 157.9 159 50.9
BraA01t01158Z Brassica rapa HOM05D005973 ORTHO05D007285 1.9e-36 157.5 292 33.9
BcaC09g51316 Brassica carinata HOM05D005973 ORTHO05D007285 2.4e-36 157.1 204 41.2
C01p14480 Brassica napus HOM05D005973 ORTHO05D007285 2.4e-36 157.1 204 41.2
BolC1t01403H Brassica oleracea HOM05D005973 ORTHO05D007285 2.4e-36 157.1 181 43.6
CSS0029678 Camellia sinensis var. sinensis HOM05D005973 ORTHO05D007285 7.1e-36 155.6 125 58.4
PGSC0003DMG400006820 Solanum tuberosum HOM05D005973 ORTHO05D007285 7.1e-36 155.6 113 61.9
Sed0021022 Sechium edule HOM05D005973 ORTHO05D007285 1.2e-35 154.8 291 33.3
Actinidia21529 Actinidia chinensis HOM05D005973 ORTHO05D007285 6.0e-35 152.5 243 37.4
Sc14g0005840 Simmondsia chinensis HOM05D005973 ORTHO05D007285 6.0e-35 152.5 266 36.5
CsaV3_5G024580 Cucumis sativus L. HOM05D005973 ORTHO05D007285 6.6e-34 149.1 155 50.3
CDE07G0106 Ceratophyllum demersum HOM05D005973 ORTHO05D007285 1.1e-33 148.3 131 49.6
MELO3C005140.2 Cucumis melo HOM05D005973 ORTHO05D007285 3.3e-33 146.7 155 50.3
Lsat_1_v5_gn_1_100901 Lactuca sativa HOM05D005973 ORTHO05D007285 1.1e-31 141.7 291 30.6
Os07g0179000 Oryza sativa ssp. japonica HOM05D005973 ORTHO05D007285 6.4e-29 132.5 130 46.2
Zm00001eb301300 Zea mays HOM05D005973 ORTHO05D007285 6.0e-27 125.9 269 32.0
SEGI_06598 Sequoiadendron giganteum HOM05D005973 ORTHO05D007285 4.8e-24 116.3 111 48.6
TAR624G0512 Trochodendron aralioides HOM05D005973 ORTHO05D007285 2.0e-22 110.9 298 48.7
TPR.G32953 Trifolium pratense HOM05D001691 ORTHO05D001704 2.2e-13 80.9 51 80.4
EL10Ac2g03340 Beta vulgaris HOM05D005973 ORTHO05D007285 4.2e-12 76.6 253 47.0
QL10p041489 Quercus lobata HOM05D005973 ORTHO05D007285 9.3e-12 75.5 59 57.6
TAR623G1283 Trochodendron aralioides HOM05D005973 ORTHO05D007285 2.7e-11 73.9 163 34.4
TPR.G9422 Trifolium pratense HOM05D001691 ORTHO05D001704 1.3e-10 71.6 50 72.0
Ca_00318_v3 Cicer arietinum L. HOM05D001691 ORTHO05D001704 5.1e-10 69.7 59 67.8
Psat7g150360 Pisum sativum HOM05D001691 ORTHO05D001704 5.6e-09 66.2 60 61.7
Atru.chr10.2008 Acer truncatum HOM05D005973 ORTHO05D007285 8.1e-08 62.4 167 28.1
CANSAT11G0234 Cannabis sativa HOM05D006842 ORTHO05D008908 1.8e-07 61.2 115 29.6
ECA234G2429 Erigeron canadensis HOM05D004271 ORTHO05D006011 3.1e-07 60.5 126 29.4
MD00G1189300 Malus domestica HOM05D008684 ORTHO05D010796 4.5e-06 56.6 118 25.4
RcHm_v2.0_Chr4g0408211 Rosa chinensis HOM05D008684 ORTHO05D010796 7.6e-06 55.8 119 25.2


User provided reference genes

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