Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24279_v3 Cicer arietinum L. HOM05D004182 ORTHO05D004271 5.5e-49 197.2 92 100.0
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 6.5e-18 94.0 46 93.5
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 1.5e-17 92.8 46 91.3
EL10Ac7g17375 Beta vulgaris HOM05D004182 ORTHO05D004271 6.3e-13 77.4 46 80.4
EL10As15g24134 Beta vulgaris HOM05D004182 ORTHO05D004271 6.3e-13 77.4 46 80.4
Gohir.D05G007050 Gossypium hirsutum HOM05D004182 ORTHO05D004271 8.3e-13 77.0 45 82.2
DCAR_003888 Daucus carota HOM05D004182 ORTHO05D004271 1.4e-12 76.3 45 82.2
Nitab4.5_0000046g0170 Nicotiana tabacum HOM05D020983 ORTHO05D020217 1.8e-12 75.9 55 72.7
SalBow1G6083 Salvia bowleyana HOM05D008259 ORTHO05D013014 1.8e-12 75.9 44 84.1
Nitab4.5_0014528g0020 Nicotiana tabacum HOM05D008259 ORTHO05D004271 4.1e-12 74.7 51 72.5
Sc23g0003920 Simmondsia chinensis HOM05D000806 ORTHO05D002320 4.1e-12 74.7 48 75.0
arahy.Tifrunner.gnm1.ann1.Y4U9X5 Arachis hypogaea HOM05D008259 ORTHO05D004271 9.2e-12 73.6 41 87.8
Peaxi162Scf00080g00510 Petunia axillaris HOM05D011856 ORTHO05D013014 2.7e-11 72.0 45 77.8
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 5.9e-11 70.9 42 81.0
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 7.8e-11 70.5 41 82.9
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.0e-10 70.1 42 78.6
vmacro22394 Vaccinium macrocarpon HOM05D008259 ORTHO05D004271 1.3e-10 69.7 41 82.9
arahy.Tifrunner.gnm1.ann1.XUX2EX Arachis hypogaea HOM05D000963 ORTHO05D004271 2.3e-10 68.9 76 56.6
Migut.D01390 Erythranthe guttata HOM05D004182 ORTHO05D004271 2.3e-10 68.9 40 82.5
Migut.D01394 Erythranthe guttata HOM05D004182 ORTHO05D004271 2.3e-10 68.9 40 82.5
Nitab4.5_0001554g0040 Nicotiana tabacum HOM05D004182 ORTHO05D004271 2.3e-10 68.9 42 76.2
Gohir.D03G055050 Gossypium hirsutum HOM05D004182 ORTHO05D004271 3.8e-10 68.2 42 78.6
Nitab4.5_0001379g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.8e-10 68.2 37 86.5
Gorai.003G057800 Gossypium raimondii HOM05D004182 ORTHO05D004271 1.5e-09 66.2 42 76.2
Lsat_1_v5_gn_2_31300 Lactuca sativa HOM05D001070 ORTHO05D002096 3.3e-09 65.1 46 69.6
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.2e-08 63.2 32 90.6
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 1.2e-08 63.2 32 90.6
arahy.Tifrunner.gnm1.ann1.T8J8BP Arachis hypogaea HOM05D000216 ORTHO05D003638 1.6e-08 62.8 71 52.1
Atru.chr6.228 Acer truncatum HOM05D004182 ORTHO05D004271 2.1e-08 62.4 37 78.4
Migut.D01389 Erythranthe guttata HOM05D008194 ORTHO05D004271 4.0e-07 58.2 32 84.4


User provided reference genes

Program Settings