Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 8.0e-49 196.8 103 100.0
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 6.2e-41 170.6 104 90.4
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 1.2e-33 146.4 102 78.4
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 2.1e-33 145.6 102 80.4
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 2.0e-31 139.0 102 75.5
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.3e-27 126.3 104 67.3
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 3.9e-27 124.8 102 66.7
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 1.5e-26 122.9 104 65.4
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 3.6e-25 118.2 105 64.8
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 5.8e-23 110.9 104 61.5
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 3.8e-22 108.2 97 63.9
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 1.2e-20 103.2 102 59.8
Medtr4g110120 Medicago truncatula HOM05D006386 ORTHO05D007575 1.0e-19 100.1 63 82.5
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 1.1e-16 90.1 101 57.4
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 3.1e-16 88.6 102 51.0
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 3.1e-16 88.6 96 52.1
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 6.9e-16 87.4 101 48.5
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 9.0e-16 87.0 106 47.2
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 2.6e-15 85.5 102 50.0
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 4.4e-15 84.7 106 47.2
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 9.9e-15 83.6 106 45.3
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 1.7e-14 82.8 103 47.6
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.2e-14 82.4 106 46.2
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 2.9e-14 82.0 106 45.3
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 3.8e-14 81.6 106 44.3
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.8e-14 81.6 106 43.4
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 4.9e-14 81.3 106 43.4
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.4e-13 79.7 106 45.3
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 1.9e-13 79.3 105 46.7
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 1.9e-13 79.3 106 42.5
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 3.2e-13 78.6 106 42.5
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 1.6e-12 76.3 106 45.3
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 1.6e-12 76.3 106 43.4
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 4.6e-12 74.7 107 45.8
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 7.8e-12 73.9 106 40.6
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.0e-11 73.6 106 36.8
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 2.3e-11 72.4 107 44.9
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 2.3e-11 72.4 107 43.0
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 3.0e-11 72.0 106 39.6
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 3.0e-11 72.0 106 42.5
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 3.9e-11 71.6 108 44.4
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 6.6e-11 70.9 106 41.5
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 8.7e-11 70.5 104 35.6
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 8.7e-11 70.5 106 39.6
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 2.5e-10 68.9 106 39.6
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 4.3e-10 68.2 105 39.0
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 5.6e-10 67.8 107 43.9
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.6e-09 66.2 83 42.2
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 2.1e-09 65.9 105 40.0
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 2.8e-09 65.5 106 39.6
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 4.8e-09 64.7 77 46.8
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 4.8e-09 64.7 100 37.0
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 8.1e-09 63.9 106 38.7
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 1.1e-08 63.5 83 38.6
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.1e-08 63.5 105 36.2
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 1.4e-08 63.2 106 37.7
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.4e-08 63.2 105 35.2
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 3.1e-08 62.0 107 38.3
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 3.1e-08 62.0 105 34.3
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 5.3e-08 61.2 105 34.3
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 9.0e-08 60.5 106 34.0
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 1.5e-07 59.7 100 38.0
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 2.0e-07 59.3 104 37.5
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 2.0e-07 59.3 105 34.3
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 5.8e-07 57.8 99 38.4
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 5.8e-07 57.8 106 37.7
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 1.7e-06 56.2 102 33.3
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 8.4e-06 53.9 106 33.0
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 8.4e-06 53.9 98 32.7


User provided reference genes

Program Settings