Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24276_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.5e-130 467.2 242 100.0
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 1.7e-65 253.4 148 76.4
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-64 250.8 303 48.2
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.5e-64 248.4 155 73.5
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-63 246.9 167 70.7
Ca_16771_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.5e-63 245.7 154 76.6
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-61 240.0 169 67.5
Ca_12256_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.8e-60 235.3 150 72.0
Ca_15168_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-58 229.9 285 50.9
Ca_03929_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.8e-58 228.4 156 69.9
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.2e-52 208.0 151 64.9
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-40 170.6 99 77.8
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-37 161.0 210 41.0
Ca_05534_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.7e-36 156.0 91 76.9
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.1e-35 154.5 239 38.5
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 2.2e-33 146.7 169 46.7
Ca_22478_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.2e-33 146.7 81 79.0
Ca_28370_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.2e-32 142.5 72 83.3
Ca_31096_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.2e-32 142.5 72 83.3
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.1e-31 138.7 72 80.6
Ca_31217_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-30 136.7 72 80.6
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-30 136.0 249 35.7
Ca_05231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.7e-30 135.2 72 80.6
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.1e-29 134.4 255 34.1
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.7e-29 132.1 299 30.4
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.7e-28 129.4 299 30.4
Ca_10806_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.3e-28 128.6 67 80.6
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 1.4e-27 127.5 157 42.7
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.4e-27 127.5 282 31.2
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.3e-27 125.6 148 43.2
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.1e-27 124.8 147 43.5
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-26 124.0 148 41.9
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.7e-26 123.2 239 33.5
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.7e-26 121.7 148 41.2
Ca_23365_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 1.0e-25 121.3 74 75.7
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-25 120.9 297 29.0
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.8e-25 119.4 176 38.1
Ca_04284_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.9e-24 117.1 191 35.1
Ca_02100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.5e-24 115.5 142 41.5
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.5e-24 115.5 177 37.3
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.2e-24 115.2 174 37.9
Ca_30958_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.1e-23 113.6 126 44.4
Ca_00657_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-22 111.3 146 45.9
Ca_01588_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-22 110.9 151 38.4
Ca_19837_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-22 110.9 150 43.3
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-22 110.5 197 35.0
Ca_23376_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-21 107.1 191 34.6
Ca_20984_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.2e-20 103.6 46 91.3
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-20 103.2 219 31.1
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.3e-20 101.7 96 46.9
Ca_14675_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.7e-18 96.7 128 39.8
Ca_18100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-17 94.7 177 34.5
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-17 94.7 208 32.7
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.9e-17 93.2 201 32.8
Ca_07256_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 6.5e-17 92.0 182 34.6
Ca_10492_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.5e-17 91.7 43 86.0
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.5e-17 91.7 120 37.5
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.5e-16 89.0 85 42.4
Ca_14143_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.4e-16 88.2 238 30.3
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 1.2e-15 87.8 96 42.7
Ca_14807_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.1e-15 87.0 71 59.2
Ca_19142_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-14 83.6 127 38.6
Ca_03568_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.8e-14 81.6 104 45.2
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-13 79.7 211 27.0
Ca_25324_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.4e-13 79.7 178 32.6
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 7.5e-13 78.6 238 26.1
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-11 74.3 105 35.2
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-11 73.9 99 36.4
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.1e-11 73.2 108 35.2
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.1e-11 72.8 107 34.6
Ca_14516_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.1e-11 72.8 97 37.1
Ca_22382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.0e-11 72.0 125 33.6
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-11 71.6 206 27.7
Ca_13742_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.2e-11 71.6 70 42.9
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.0e-10 70.5 100 35.0
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.7e-10 68.6 255 23.9
Ca_01641_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.0e-09 68.2 89 36.0
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.0e-09 68.2 105 33.3
Ca_20173_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.0e-09 68.2 177 31.1
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.7e-09 67.4 101 35.6
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 1.7e-09 67.4 109 33.9
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-09 67.0 101 35.6
Ca_07562_v3 Cicer arietinum L. HOM05D003576 ORTHO05D004124 2.9e-09 66.6 150 30.0
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.9e-09 66.6 84 39.3
Ca_03231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.8e-09 66.2 189 30.7
Ca_03687_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.8e-09 66.2 73 42.5
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.8e-09 66.2 127 30.7
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.0e-09 65.9 132 35.6
Ca_02962_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-08 64.3 141 31.2
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-08 64.3 85 37.6
Ca_14656_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-08 64.3 84 38.1
Ca_13090_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-08 63.9 97 34.0
Ca_14010_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.3e-08 63.2 62 53.2
Ca_07923_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.3e-08 62.8 141 31.2
Ca_14648_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-08 62.8 77 40.3
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-08 62.0 192 25.5
Ca_06652_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-08 61.6 62 53.2
Ca_07670_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.5e-08 61.6 62 53.2
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.5e-08 61.6 122 36.1
Ca_14009_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.5e-08 61.6 62 53.2
Ca_18938_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-08 61.6 62 53.2
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.6e-07 60.8 101 34.7
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.6e-07 60.8 101 32.7
Ca_08875_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.6e-07 60.8 57 49.1
Ca_15961_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.8e-07 60.1 117 30.8
Ca_25560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.8e-07 60.1 75 40.0
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.7e-07 59.3 85 37.6
Ca_24294_v3 Cicer arietinum L. HOM05D024801 ORTHO05D002183 4.7e-07 59.3 54 50.0
Ca_25183_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-07 59.3 62 50.0
TPR.G22232 Trifolium pratense HOM05D014852 ORTHO05D023173 4.7e-07 59.3 65 40.0
Ca_01819_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.0e-07 58.5 75 41.3
Ca_18716_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.0e-07 58.5 75 38.7
Ca_20709_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-06 58.2 40 65.0
Ca_30516_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-06 58.2 166 30.7
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-06 57.8 85 37.6
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-06 57.8 106 37.7
Ca_26973_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.4e-06 57.8 88 33.0
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-06 57.8 96 31.2
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.8e-06 57.4 115 31.3
Ca_30374_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-06 57.4 105 30.5
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.8e-06 57.4 134 23.1
Ca_07112_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-06 57.0 46 63.0
Ca_14586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.0e-06 56.6 87 41.4
Ah.01g016330 Amaranthus hybridus HOM05D018751 ORTHO05D012560 4.0e-06 56.2 115 30.4
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.0e-06 56.2 104 32.7
Ca_26980_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-06 56.2 62 53.2
Ca_19794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.2e-06 55.8 54 46.3
Ca_12966_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.8e-06 55.5 85 34.1
Ca_25773_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.9e-06 55.1 53 47.2


User provided reference genes

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