Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 3.9e-268 927.5 467 100.0
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 3.1e-241 838.2 525 84.4
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 5.4e-209 731.1 550 71.1
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 1.4e-204 716.5 550 69.8
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 1.3e-199 699.9 552 69.7
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 1.2e-197 693.3 551 68.1
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 4.7e-197 691.4 549 68.1
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 5.2e-196 688.0 551 68.2
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 6.8e-196 687.6 550 67.5
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 8.9e-196 687.2 550 68.2
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 2.6e-195 685.6 550 68.2
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 4.9e-194 681.4 551 67.3
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 1.1e-193 680.2 547 69.3
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 1.9e-193 679.5 537 68.0
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 5.4e-193 677.9 551 67.0
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 3.5e-192 675.2 550 67.1
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 7.3e-190 667.5 550 66.5
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 2.6e-187 659.1 537 66.3
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 7.5e-187 657.5 551 65.7
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 2.2e-186 656.0 550 65.1
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 1.3e-183 646.7 546 65.0
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 1.3e-183 646.7 546 65.0
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 5.1e-183 644.8 590 62.0
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 3.7e-178 628.6 549 62.1
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 7.3e-174 614.4 551 61.9
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 3.1e-172 609.0 546 61.7
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 3.1e-172 609.0 537 61.6
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.7e-170 603.2 354 87.3
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 2.9e-170 602.4 514 63.6
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 2.9e-170 602.4 552 60.1
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 2.9e-170 602.4 539 61.8
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 2.4e-169 599.4 549 60.3
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 2.4e-169 599.4 556 59.5
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 2.1e-168 596.3 556 59.7
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 2.7e-168 595.9 562 59.3
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 4.6e-168 595.1 549 60.5
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 6.0e-168 594.7 556 59.4
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 7.8e-168 594.3 562 59.3
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 1.0e-167 594.0 460 70.0
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 1.7e-167 593.2 553 60.0
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 4.3e-166 588.6 515 63.1
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 1.3e-165 587.0 553 59.3
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 3.6e-165 585.5 550 58.9
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 8.1e-165 584.3 538 60.0
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.1e-164 583.9 551 59.0
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 3.1e-164 582.4 549 60.1
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.1e-164 582.4 547 58.5
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 9.0e-164 580.9 511 62.0
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 2.0e-163 579.7 511 62.0
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 2.0e-163 579.7 511 62.0
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.4e-163 578.9 511 62.0
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.4e-163 578.9 511 61.8
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 3.4e-163 578.9 536 59.7
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 4.9e-162 575.1 553 58.8
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 6.4e-162 574.7 556 57.7
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 8.4e-162 574.3 555 59.1
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 1.4e-161 573.5 526 60.3
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 1.4e-161 573.5 543 59.5
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.2e-161 572.4 516 61.4
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 1.2e-160 570.5 560 58.2
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.2e-160 570.5 537 59.6
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 2.1e-160 569.7 556 58.1
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 6.0e-160 568.2 560 58.0
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 2.3e-159 566.2 489 62.6
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 2.5e-158 562.8 530 60.0
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 3.3e-158 562.4 558 57.5
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 7.3e-158 561.2 533 59.3
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 8.1e-157 557.8 505 59.6
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 1.8e-156 556.6 559 55.6
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 4.0e-156 555.4 489 61.8
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 5.3e-156 555.1 534 56.7
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 6.9e-156 554.7 558 56.6
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 6.9e-156 554.7 549 57.7
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 1.5e-155 553.5 516 58.7
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.5e-155 553.5 534 56.9
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 9.9e-155 550.8 526 58.4
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 2.2e-154 549.7 526 58.2
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 4.9e-154 548.5 549 55.6
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 6.4e-154 548.1 548 56.2
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 1.1e-153 547.4 395 73.2
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 1.4e-153 547.0 564 54.4
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 1.4e-153 547.0 516 58.5
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 4.2e-153 545.4 526 58.2
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 1.6e-152 543.5 551 56.8
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 2.7e-152 542.7 459 64.3
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 6.0e-152 541.6 560 53.8
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 7.9e-152 541.2 459 64.3
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 1.8e-151 540.0 523 56.8
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 3.0e-151 539.3 547 56.5
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 3.9e-151 538.9 518 56.9
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 6.7e-151 538.1 539 56.0
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 7.4e-150 534.6 549 55.6
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 1.3e-149 533.9 551 55.9
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.3e-149 533.9 468 59.8
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 1.1e-148 530.8 544 55.9
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 6.9e-148 528.1 545 54.5
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 6.9e-148 528.1 561 52.9
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 2.6e-147 526.2 535 54.8
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 2.6e-147 526.2 560 53.0
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 4.5e-147 525.4 441 66.0
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 7.6e-147 524.6 561 53.1
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.7e-146 523.5 546 54.4
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.1e-145 520.8 523 55.1
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 1.4e-145 520.4 472 61.4
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 7.1e-145 518.1 546 53.8
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 1.6e-144 516.9 535 54.6
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 1.3e-143 513.8 535 54.2
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 1.1e-142 510.8 535 53.8
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 1.5e-142 510.4 535 54.0
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 1.3e-141 507.3 568 53.9
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 1.6e-141 506.9 548 53.1
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 2.8e-141 506.1 539 52.9
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 6.2e-141 505.0 529 52.9
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.1e-140 504.2 640 49.2
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 1.3e-138 497.3 489 56.4
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 2.2e-138 496.5 535 53.5
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 6.5e-138 495.0 523 55.8
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 8.7e-135 484.6 463 57.0
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 1.1e-132 477.6 427 59.7
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 3.4e-131 472.6 433 58.4
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 8.5e-130 468.0 549 53.4
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 1.1e-126 457.6 542 49.6
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 2.4e-124 449.9 404 59.2
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 7.7e-123 444.9 556 48.6
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 1.7e-122 443.7 375 64.3
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.8e-119 433.7 402 57.0
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 3.1e-116 422.9 561 45.8
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 4.5e-115 419.1 539 47.9
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 1.1e-110 404.4 465 52.3
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 2.0e-110 403.7 376 56.9
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.6e-104 384.0 534 45.1
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 1.8e-100 370.5 549 43.5
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 1.6e-99 367.5 542 44.3
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 3.5e-99 366.3 503 44.9
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 5.9e-99 365.5 343 59.8
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.6e-91 340.9 361 54.6
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 5.9e-91 339.0 552 39.3
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 3.3e-89 333.2 332 57.8
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 6.8e-87 325.5 560 39.8
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 3.4e-78 296.6 548 37.6
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 1.0e-66 258.5 175 77.1
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 8.6e-58 228.8 397 38.0
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 9.6e-57 225.3 527 33.8
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 1.2e-54 218.4 247 53.8
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 6.6e-50 202.6 195 56.9
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 8.4e-45 185.7 306 37.3
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 3.2e-44 183.7 91 93.4
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 7.1e-44 182.6 470 31.3
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 1.1e-41 175.3 111 77.5
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 3.3e-41 173.7 150 66.7
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 1.3e-34 151.8 165 61.2
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 2.1e-32 144.4 113 57.5
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 1.4e-31 141.7 125 49.6
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 9.3e-28 129.0 91 71.4
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 1.9e-25 121.3 408 27.9
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 1.4e-23 115.2 171 36.3
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 4.2e-20 103.6 128 49.2
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 7.2e-20 102.8 164 38.4
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 4.5e-14 83.6 39 94.9
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 3.8e-13 80.5 42 88.1
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.1e-12 79.0 39 89.7
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 9.4e-12 75.9 40 82.5
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 4.6e-11 73.6 55 63.6
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 1.0e-10 72.4 68 58.8
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 9.7e-09 65.9 33 84.8
Medtr3g040320 Medicago truncatula HOM05D004210 ORTHO05D005017 3.7e-08 63.9 57 59.6
BcaC01g03529 Brassica carinata HOM05D004210 ORTHO05D005017 5.9e-06 56.6 66 45.5


User provided reference genes

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