Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_24092_v3 Cicer arietinum L. HOM05D001148 ORTHO05D000960 5.5e-31 137.5 98 100.0
CiPaw.02G022700 Carya illinoinensis HOM05D001148 ORTHO05D000960 6.5e-24 114.0 98 64.3
CSS0006751 Camellia sinensis var. sinensis HOM05D001148 ORTHO05D000960 1.5e-23 112.8 96 63.5
Cfa004374 Carpinus fangiana HOM05D001148 ORTHO05D000960 2.7e-22 108.6 98 70.4
GSVIVG01003255001 Vitis vinifera HOM05D001148 ORTHO05D000960 3.6e-22 108.2 97 62.9
Medtr7g056133 Medicago truncatula HOM05D001148 ORTHO05D000960 4.7e-22 107.8 98 83.7
QL09p051828 Quercus lobata HOM05D001148 ORTHO05D000960 1.0e-21 106.7 96 74.0
QL09p052518 Quercus lobata HOM05D001148 ORTHO05D000960 1.0e-21 106.7 96 77.1
QL09p052606 Quercus lobata HOM05D001148 ORTHO05D000960 1.0e-21 106.7 96 74.0
QL09p052719 Quercus lobata HOM05D001148 ORTHO05D000960 1.0e-21 106.7 96 74.0
Hma1.2p1_0226F.1_g095460 Hydrangea macrophylla HOM05D001148 ORTHO05D000960 2.3e-21 105.5 98 60.2
Manes.12G046700 Manihot esculenta HOM05D001148 ORTHO05D000960 2.3e-21 105.5 98 72.4
Potri.002G245300 Populus trichocarpa HOM05D001148 ORTHO05D000960 3.0e-21 105.1 96 59.4
SalBow6G1794 Salvia bowleyana HOM05D001148 ORTHO05D000960 6.7e-21 104.0 97 63.9
SalBow6G4344 Salvia bowleyana HOM05D001148 ORTHO05D000960 6.7e-21 104.0 97 63.9
Nitab4.5_0000045g0410 Nicotiana tabacum HOM05D001148 ORTHO05D000960 5.7e-20 100.9 97 69.1
CANSAT01G1967 Cannabis sativa HOM05D001148 ORTHO05D000960 7.4e-20 100.5 98 72.4
Dinv19182 Davidia involucrata HOM05D001148 ORTHO05D000960 7.4e-20 100.5 96 55.2
vmacro02778 Vaccinium macrocarpon HOM05D001148 ORTHO05D000960 7.4e-20 100.5 97 71.1
CiPaw.01G049300 Carya illinoinensis HOM05D001148 ORTHO05D000960 9.7e-20 100.1 92 62.0
MD10G1160700 Malus domestica HOM05D001148 ORTHO05D000960 1.3e-19 99.8 98 73.5
Solyc09g059570.3 Solanum lycopersicum HOM05D001148 ORTHO05D000960 1.7e-19 99.4 97 57.7
Sopen09g022750 Solanum pennellii HOM05D001148 ORTHO05D000960 1.7e-19 99.4 97 57.7
PGSC0003DMG400017494 Solanum tuberosum HOM05D001148 ORTHO05D000960 1.7e-19 99.4 97 57.7
CsaV3_3G029990 Cucumis sativus L. HOM05D001148 ORTHO05D000960 2.2e-19 99.0 94 58.5
Rhsim13G0047100 Rhododendron simsii HOM05D001148 ORTHO05D000960 2.2e-19 99.0 96 78.1
Lj1g0009415 Lotus japonicus HOM05D001148 ORTHO05D000960 2.8e-19 98.6 97 73.2
Cc01_g16800 Coffea canephora HOM05D001148 ORTHO05D000960 6.3e-19 97.4 97 55.7
Peaxi162Scf00238g00026 Petunia axillaris HOM05D001148 ORTHO05D000960 6.3e-19 97.4 97 57.7
MELO3C022712.2 Cucumis melo HOM05D001148 ORTHO05D000960 8.2e-19 97.1 94 67.0
Gohir.D07G206200 Gossypium hirsutum HOM05D001148 ORTHO05D000960 1.1e-18 96.7 98 68.4
AUR62001120 Chenopodium quinoa HOM05D001148 ORTHO05D000960 1.4e-18 96.3 91 70.3
COL.COLO4_15640 Corchorus olitorius HOM05D001148 ORTHO05D000960 1.8e-18 95.9 98 68.4
Phvul.010G021100 Phaseolus vulgaris HOM05D001148 ORTHO05D000960 1.8e-18 95.9 94 66.0
Gorai.001G232500 Gossypium raimondii HOM05D001148 ORTHO05D000960 2.4e-18 95.5 98 66.3
Nitab4.5_0000345g0020 Nicotiana tabacum HOM05D001148 ORTHO05D000960 2.4e-18 95.5 97 54.6
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 2.4e-18 95.5 97 61.9
TWI75G1294 Tripterygium wilfordii HOM05D001148 ORTHO05D000960 5.3e-18 94.4 98 50.0
ClCG07G002030 Citrullus lanatus HOM05D001148 ORTHO05D000960 9.1e-18 93.6 94 70.2
FAN15G0721 Fragaria x ananassa HOM05D001148 ORTHO05D000960 9.1e-18 93.6 94 56.4
TPR.G6415 Trifolium pratense HOM05D001148 ORTHO05D000960 1.2e-17 93.2 98 76.5
MSTRG.18840 Avicennia marina HOM05D001148 ORTHO05D000960 2.0e-17 92.4 90 72.2
RcHm_v2.0_Chr6g0284221 Rosa chinensis HOM05D001148 ORTHO05D000960 2.6e-17 92.0 94 59.6
Thecc.01G221800 Theobroma cacao HOM05D001148 ORTHO05D000960 2.6e-17 92.0 89 75.3
Gohir.A07G199800 Gossypium hirsutum HOM05D001148 ORTHO05D000960 7.7e-17 90.5 98 69.4
Nn1g07937 Nelumbo nucifera HOM05D001148 ORTHO05D000960 1.0e-16 90.1 95 64.2
SalBow3G2166 Salvia bowleyana HOM05D001148 ORTHO05D000960 1.0e-16 90.1 94 52.1
arahy.Tifrunner.gnm1.ann1.AQ7EBY Arachis hypogaea HOM05D001148 ORTHO05D000960 1.3e-16 89.7 95 74.7
CDE05G1151 Ceratophyllum demersum HOM05D001148 ORTHO05D000960 2.9e-16 88.6 98 52.0
Eucgr.H00780 Eucalyptus grandis HOM05D001148 ORTHO05D000960 6.5e-16 87.4 95 61.1
Sc05g0001990 Simmondsia chinensis HOM05D001148 ORTHO05D000960 8.5e-16 87.0 96 65.6
Ciclev10022165m.g Citrus clementina HOM05D001148 ORTHO05D000960 1.9e-15 85.9 97 69.1
MSTRG.17998 Avicennia marina HOM05D001148 ORTHO05D000960 2.5e-15 85.5 91 52.7
FvH4_2g18660 Fragaria vesca HOM05D001148 ORTHO05D000960 2.5e-15 85.5 94 69.1
FAN27G0607 Fragaria x ananassa HOM05D001148 ORTHO05D000960 2.5e-15 85.5 94 69.1
Carub.0008s0838 Capsella rubella HOM05D001148 ORTHO05D000960 3.2e-15 85.1 93 63.4
FAN24G2152 Fragaria x ananassa HOM05D001148 ORTHO05D000960 4.2e-15 84.7 93 69.9
Oeu031827.1 Olea europaea HOM05D001148 ORTHO05D000960 4.2e-15 84.7 97 59.8
DCAR_012661 Daucus carota HOM05D001148 ORTHO05D000960 5.5e-15 84.3 91 52.7
Migut.D02498 Erythranthe guttata HOM05D001148 ORTHO05D000960 5.5e-15 84.3 95 53.7
Prupe.8G199900 Prunus persica HOM05D001148 ORTHO05D000960 5.5e-15 84.3 98 66.3
SGA_v2.0_scaffold18G08330 Striga asiatica HOM05D001148 ORTHO05D000960 7.2e-15 84.0 88 54.5
VMungo1383G3571 Vigna mungo HOM05D001148 ORTHO05D000960 7.2e-15 84.0 47 87.2
TAR362G1309 Trochodendron aralioides HOM05D001148 ORTHO05D000960 1.2e-14 83.2 98 51.0
Duzib211G0673 Durio zibethinus HOM05D001148 ORTHO05D000960 1.6e-14 82.8 92 69.6
Gohir.D08G212656 Gossypium hirsutum HOM05D001148 ORTHO05D000960 1.6e-14 82.8 91 69.2
Gorai.004G226500 Gossypium raimondii HOM05D001148 ORTHO05D000960 1.6e-14 82.8 91 69.2
Lj2A1127T49 Lonicera japonica HOM05D001148 ORTHO05D000960 2.1e-14 82.4 96 70.8
TAR365G1065 Trochodendron aralioides HOM05D001148 ORTHO05D000960 2.1e-14 82.4 98 50.0
arahy.Tifrunner.gnm1.ann1.HB650C Arachis hypogaea HOM05D001148 ORTHO05D000960 2.7e-14 82.0 95 72.6
Cpa.g.sc8.128 Carica papaya HOM05D001148 ORTHO05D000960 2.7e-14 82.0 98 64.3
Gohir.A08G195200 Gossypium hirsutum HOM05D001148 ORTHO05D000960 3.6e-14 81.6 91 65.9
MD05G1172500 Malus domestica HOM05D001148 ORTHO05D000960 3.6e-14 81.6 96 64.6
MSTRG.20965 Avicennia marina HOM05D001148 ORTHO05D000960 4.7e-14 81.3 95 71.6
MBI07_g28660_MAGBIO Magnolia biondii HOM05D001148 ORTHO05D000960 4.7e-14 81.3 98 63.3
Phvul.008G130500 Phaseolus vulgaris HOM05D001148 ORTHO05D000960 6.1e-14 80.9 47 85.1
Actinidia30060 Actinidia chinensis HOM05D001148 ORTHO05D000960 1.0e-13 80.1 96 64.6
Lalb_Chr03g0041551 Lupinus albus HOM05D001148 ORTHO05D000960 1.4e-13 79.7 94 71.3
PSO017G6073 Papaver somniferum HOM05D001148 ORTHO05D000960 1.4e-13 79.7 92 54.3
PSO063G6769 Papaver somniferum HOM05D001148 ORTHO05D000960 1.4e-13 79.7 92 54.3
Duzib138G1850 Durio zibethinus HOM05D001148 ORTHO05D000960 1.8e-13 79.3 96 68.8
Potri.014G191500 Populus trichocarpa HOM05D001148 ORTHO05D000960 2.3e-13 79.0 96 63.5
EL10Ac7g17879 Beta vulgaris HOM05D001148 ORTHO05D000960 5.2e-13 77.8 93 62.4
Glyma.18G166700 Glycine max HOM05D001148 ORTHO05D000960 6.8e-13 77.4 43 88.4
VMungo0331G0409 Vigna mungo HOM05D001148 ORTHO05D000960 6.8e-13 77.4 42 90.5
Lalb_Chr01g0022251 Lupinus albus HOM05D001148 ORTHO05D000960 2.0e-12 75.9 80 56.2
PGR083G0562 Punica granatum HOM05D001148 ORTHO05D000960 2.6e-12 75.5 95 64.2
Haze_15038 Corylus avellana HOM05D001148 ORTHO05D000960 4.4e-12 74.7 98 62.2
AT5G48660 Arabidopsis thaliana HOM05D001148 ORTHO05D000960 5.7e-12 74.3 94 68.1
BcaC06g30770 Brassica carinata HOM05D001148 ORTHO05D000960 5.7e-12 74.3 94 68.1
C07p39340 Brassica napus HOM05D001148 ORTHO05D000960 5.7e-12 74.3 94 68.1
BolC7t44454H Brassica oleracea HOM05D001148 ORTHO05D000960 5.7e-12 74.3 94 68.1
MBI11_g07439_MAGBIO Magnolia biondii HOM05D001148 ORTHO05D000960 5.7e-12 74.3 92 58.7
A02p37680 Brassica napus HOM05D001148 ORTHO05D000960 7.5e-12 73.9 94 68.1
CARHR183250 Cardamine hirsuta HOM05D001148 ORTHO05D000960 7.5e-12 73.9 94 68.1
SGA_v2.0_scaffold6G03496 Striga asiatica HOM05D001148 ORTHO05D000960 7.5e-12 73.9 88 72.7
HPP92_013553 Vanilla planifolia HOM05D001148 ORTHO05D000960 7.5e-12 73.9 96 43.8
C02p56770 Brassica napus HOM05D001148 ORTHO05D000960 9.8e-12 73.6 94 68.1
unitig_899.g15415 Utricularia gibba HOM05D001148 ORTHO05D000960 9.8e-12 73.6 95 45.3
Thhalv10004894m.g Eutrema salsugineum HOM05D001148 ORTHO05D000960 1.3e-11 73.2 94 68.1
HanXRQChr04g0108261 Helianthus annuus HOM05D001148 ORTHO05D000960 1.3e-11 73.2 90 71.1
Aqoxy2G03903 Aquilegia oxysepala HOM05D001148 ORTHO05D000960 2.2e-11 72.4 94 47.9
BraA02t08750Z Brassica rapa HOM05D001148 ORTHO05D000960 2.2e-11 72.4 94 68.1
HanXRQChr07g0189541 Helianthus annuus HOM05D001148 ORTHO05D000960 2.2e-11 72.4 97 62.9
BcaB07g30040 Brassica carinata HOM05D001148 ORTHO05D000960 2.8e-11 72.0 94 67.0
A06p38990 Brassica napus HOM05D001148 ORTHO05D000960 2.8e-11 72.0 94 67.0
BraA06t26813Z Brassica rapa HOM05D001148 ORTHO05D000960 2.8e-11 72.0 94 67.0
BolC2t11745H Brassica oleracea HOM05D001148 ORTHO05D000960 4.8e-11 71.2 94 67.0
Hund05571 Selenicereus undatus HOM05D001148 ORTHO05D000960 4.8e-11 71.2 91 54.9
AL3G18450 Arabidopsis lyrata HOM05D001148 ORTHO05D000960 8.3e-11 70.5 93 64.5
Sp2g19080 Schrenkiella parvula HOM05D001148 ORTHO05D000960 8.3e-11 70.5 94 66.0
Aa31sc661G20 Aethionema arabicum HOM05D001148 ORTHO05D000960 1.1e-10 70.1 94 66.0
TWI36G0973 Tripterygium wilfordii HOM05D001148 ORTHO05D000960 1.1e-10 70.1 47 70.2
unitig_746.g26590 Utricularia gibba HOM05D001148 ORTHO05D000960 1.8e-10 69.3 95 42.1
Thhalv10021483m.g Eutrema salsugineum HOM05D001148 ORTHO05D000960 4.1e-10 68.2 93 50.5
BcaC06g30769 Brassica carinata HOM05D001148 ORTHO05D000960 1.6e-09 66.2 94 62.8
Lj1A88T39 Lonicera japonica HOM05D001148 ORTHO05D000960 1.6e-09 66.2 39 76.9
Atru.chr6.1418 Acer truncatum HOM05D001148 ORTHO05D000960 2.0e-09 65.9 97 64.9
BcaC03g17670 Brassica carinata HOM05D001148 ORTHO05D000960 2.0e-09 65.9 94 66.0
CARHR081830 Cardamine hirsuta HOM05D001148 ORTHO05D000960 3.5e-09 65.1 91 61.5
Hma1.2p1_0149F.1_g066340 Hydrangea macrophylla HOM05D001148 ORTHO05D000960 3.5e-09 65.1 74 50.0
Os03g0848400 Oryza sativa ssp. japonica HOM05D001148 ORTHO05D000960 3.5e-09 65.1 95 64.2
Sed0007150 Sechium edule HOM05D001148 ORTHO05D000960 5.9e-09 64.3 94 61.7
CAN.G260.6 Capsicum annuum HOM05D001148 ORTHO05D000960 2.2e-08 62.4 72 47.2
ECA236G3255 Erigeron canadensis HOM05D001148 ORTHO05D000960 2.9e-08 62.0 90 66.7
Migut.N00627 Erythranthe guttata HOM05D001148 ORTHO05D000960 8.5e-08 60.5 90 63.3
Manes.13G048200 Manihot esculenta HOM05D001148 ORTHO05D000960 1.1e-07 60.1 98 53.1
Lsat_1_v5_gn_8_89541 Lactuca sativa HOM05D001148 ORTHO05D000960 1.5e-07 59.7 90 64.4
CAN.G1003.10 Capsicum annuum HOM05D001148 ORTHO05D000960 2.5e-07 58.9 97 54.6
THA.LOC104822496 Tarenaya hassleriana HOM05D001148 ORTHO05D000960 5.5e-07 57.8 94 60.6
ATR0069G015 Amborella trichopoda HOM05D001148 ORTHO05D000960 7.2e-07 57.4 93 57.0
Duzib133G1429 Durio zibethinus HOM05D001148 ORTHO05D000960 9.4e-07 57.0 34 82.4
AL8G21720 Arabidopsis lyrata HOM05D001148 ORTHO05D000960 1.2e-06 56.6 94 59.6
AT3G07190 Arabidopsis thaliana HOM05D001148 ORTHO05D000960 2.7e-06 55.5 93 55.9


User provided reference genes

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