Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 1.1e-37 159.5 78 100.0
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 7.3e-10 67.0 32 93.8
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 9.5e-10 66.6 33 87.9
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 9.5e-10 66.6 33 87.9
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 1.6e-09 65.9 38 76.3
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 2.1e-09 65.5 31 96.8
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 2.1e-09 65.5 31 96.8
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 3.6e-09 64.7 33 87.9
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 4.7e-09 64.3 30 93.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 4.7e-09 64.3 31 93.5
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 6.2e-09 63.9 29 96.6
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 6.2e-09 63.9 31 93.5
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.4e-08 62.8 29 96.6
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 1.4e-08 62.8 29 96.6
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 1.4e-08 62.8 29 96.6
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 1.4e-08 62.8 29 96.6
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 2.3e-08 62.0 29 93.1
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 2.3e-08 62.0 32 81.2
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 3.1e-08 61.6 29 93.1
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 3.1e-08 61.6 29 93.1
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 3.1e-08 61.6 29 93.1
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 4.0e-08 61.2 31 90.3
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 4.0e-08 61.2 31 90.3
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 4.0e-08 61.2 30 90.0
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 4.0e-08 61.2 31 90.3
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 4.0e-08 61.2 31 90.3
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 5.2e-08 60.8 29 93.1
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 5.2e-08 60.8 29 93.1
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 5.2e-08 60.8 29 93.1
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 6.8e-08 60.5 29 89.7
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 6.8e-08 60.5 29 89.7
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 6.8e-08 60.5 29 89.7
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 6.8e-08 60.5 34 76.5
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 8.9e-08 60.1 31 90.3
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 8.9e-08 60.1 31 90.3
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 8.9e-08 60.1 31 90.3
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 8.9e-08 60.1 31 87.1
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 8.9e-08 60.1 31 87.1
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.2e-07 59.7 32 84.4
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 93.1
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.2e-07 59.7 29 89.7
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 1.5e-07 59.3 29 89.7
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 1.5e-07 59.3 29 93.1
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 1.5e-07 59.3 29 93.1
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.5e-07 59.3 29 93.1
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 2.0e-07 58.9 29 89.7
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 2.0e-07 58.9 29 89.7
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 2.6e-07 58.5 31 87.1
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 89.7
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 89.7
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 89.7
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 89.7
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 93.1
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 89.7
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 89.7
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 2.6e-07 58.5 29 89.7
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 3.4e-07 58.2 29 89.7
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 3.4e-07 58.2 30 83.3
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 3.4e-07 58.2 29 86.2
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.4e-07 58.2 39 66.7
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 5.8e-07 57.4 29 89.7
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 5.8e-07 57.4 29 86.2
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 5.8e-07 57.4 29 89.7
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 5.8e-07 57.4 39 66.7
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 7.5e-07 57.0 29 86.2
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 7.5e-07 57.0 29 86.2
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 7.5e-07 57.0 29 86.2
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 7.5e-07 57.0 35 77.1
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 9.8e-07 56.6 29 86.2
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.3e-06 56.2 29 86.2
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 1.3e-06 56.2 29 86.2
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 1.3e-06 56.2 29 86.2
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.7e-06 55.8 29 82.8
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 4.9e-06 54.3 29 79.3
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 4.9e-06 54.3 37 73.0


User provided reference genes

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