Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.2e-64 248.8 128 100.0
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.6e-49 198.7 128 81.2
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 2.6e-49 198.7 135 80.7
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.1e-47 193.4 124 82.3
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 7.9e-46 187.2 131 77.1
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.8e-42 176.0 129 72.9
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 1.8e-42 176.0 133 72.9
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 1.7e-40 169.5 129 69.0
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 3.6e-38 161.8 136 68.4
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 4.6e-38 161.4 137 65.0
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.0e-37 160.2 137 64.2
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 6.7e-37 157.5 133 66.2
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.5e-36 156.4 129 65.9
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 3.7e-35 151.8 129 68.2
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 1.4e-31 139.8 134 63.4
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.4e-31 139.8 98 72.4
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.5e-31 139.0 127 60.6
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 3.9e-29 131.7 131 56.5
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 5.1e-29 131.3 132 58.3
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.5e-28 129.8 111 68.5
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 1.5e-28 129.8 109 68.8
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.5e-28 129.8 131 60.3
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 1.5e-28 129.8 131 55.0
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 2.0e-28 129.4 95 68.4
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 2.6e-28 129.0 131 54.2
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 2.6e-28 129.0 139 54.0
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 7.4e-28 127.5 139 54.0
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 1.7e-27 126.3 104 67.3
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 2.2e-27 125.9 136 53.7
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 2.8e-27 125.6 128 59.4
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 6.3e-27 124.4 131 57.3
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 4.1e-26 121.7 105 59.0
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 5.3e-26 121.3 157 50.3
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 9.1e-26 120.6 94 64.9
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 2.6e-25 119.0 138 56.5
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 3.5e-25 118.6 96 68.8
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 4.5e-25 118.2 98 63.3
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 4.5e-25 118.2 92 65.2
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 7.7e-25 117.5 139 52.5
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.3e-24 116.7 136 52.2
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 2.9e-24 115.5 93 65.6
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 2.9e-24 115.5 142 52.8
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 8.5e-24 114.0 149 47.0
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.1e-23 113.6 140 48.6
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.9e-23 112.8 159 48.4
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 4.2e-23 111.7 136 55.1
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 4.2e-23 111.7 158 49.4
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 1.2e-22 110.2 144 50.0
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.6e-22 109.8 158 48.7
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 2.1e-22 109.4 105 57.1
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 2.1e-22 109.4 118 60.2
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 2.1e-22 109.4 141 48.9
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.7e-22 109.0 138 50.7
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 3.6e-22 108.6 153 49.0
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 8.0e-22 107.5 157 47.8
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.0e-21 107.1 104 57.7
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 1.0e-21 107.1 104 57.7
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 1.4e-21 106.7 130 49.2
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 4.0e-21 105.1 104 56.7
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.5e-20 103.2 132 53.0
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 2.6e-20 102.4 121 51.2
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.3e-19 100.1 123 53.7
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.7e-19 99.8 96 59.4
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 2.2e-19 99.4 96 61.5
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 8.2e-19 97.4 94 60.6
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 1.4e-18 96.7 142 43.7
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 2.4e-18 95.9 129 45.0
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 2.4e-18 95.9 101 58.4
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 3.1e-18 95.5 151 49.0
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 7.0e-18 94.4 131 48.1
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.5e-17 91.7 130 47.7
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 1.7e-16 89.7 186 39.8
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.9e-15 86.3 94 55.3
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.5e-15 85.9 94 55.3
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.2e-14 83.6 139 44.6
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.6e-14 83.2 140 45.0
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.6e-14 83.2 94 54.3
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 2.1e-14 82.8 94 54.3
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 2.1e-14 82.8 138 44.9
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 2.1e-14 82.8 121 48.8
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 2.1e-14 82.8 101 51.5
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.7e-14 81.6 140 44.3
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 2.3e-13 79.3 129 42.6
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.4e-12 75.5 130 36.9
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 3.4e-12 75.5 128 43.0
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 5.7e-12 74.7 97 50.5
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.5e-12 74.3 114 43.0
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 9.8e-12 73.9 99 47.5
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 1.3e-11 73.6 137 38.0
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 1.7e-11 73.2 97 50.5
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.8e-11 72.4 89 48.3
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 4.8e-11 71.6 138 39.9
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.8e-10 69.7 97 45.4
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 2.4e-10 69.3 133 42.1
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 2.4e-10 69.3 109 45.0
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 3.1e-10 68.9 109 45.0
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.6e-09 66.6 128 36.7
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 1.7e-08 63.2 77 50.6
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 1.7e-08 63.2 98 37.8
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 1.7e-08 63.2 98 37.8
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 5.0e-08 61.6 107 41.1
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 2.5e-07 59.3 80 48.8
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 4.2e-07 58.5 81 45.7


User provided reference genes

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